RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 ZNF365Q70YC5 407 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 DDX21Q9NR30 783 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 DNM3Q9UQ16 869 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 EVCP57679 992 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 POSTNQ15063 836 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 BTG4Q9NY30 223 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 IVNS1ABPQ9Y6Y0 642 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 ARHGEF10O15013 1369 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 ECM2O94769 699 aaPredicted RBP13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 ZNF202O95125 648 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 GCP02774 474 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 TTC38Q5R3I4 469 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 EIF6P56537 245 aaKnown RBP13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 CARD10Q9BWT7 1032 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 VPS16Q9H269 839 aa13.9□□□□□ -0.18
RAB3IP-212ENST00000550536 QRICH2Q9H0J4 1663 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 CETN3O15182 167 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 APPBP2Q92624 585 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 SARNPP82979 210 aaKnown RBP13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 USH1GQ495M9 461 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 CCNL1Q9UK58 526 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 P4HA1P13674 534 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 TRAPPC8Q9Y2L5 1435 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 MAP2P11137 1827 aaKnown RBP13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 TSPYL6Q8N831 410 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 AZI2Q9H6S1 392 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 TSKSQ9UJT2 592 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 EYA2O00167 538 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 MYCLP12524 364 aaPredicted RBP13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 DCUN1D2Q6PH85 259 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 RPUSD2Q8IZ73 545 aaKnown RBP13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 KDM3AQ9Y4C1 1321 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 VCX3BQ9H321 246 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 OGFRQ9NZT2 677 aa13.89□□□□□ -0.19
RAB3IP-212ENST00000550536 DNM2P50570 870 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 GKAP1Q5VSY0 366 aaPredicted RBP13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 DENND2CQ68D51 928 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 MYCT1Q8N699 235 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 PHACTR3Q96KR7 559 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 GOLGA6CA6NDK9 693 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 GOLGA6DP0CG33 693 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 CNGA1P29973 690 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 GTF3C6Q969F1 213 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 GOLGA6AQ9NYA3 693 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 M0QZ92 97 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 NCAPH2Q6IBW4 605 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 CACNA2D3Q8IZS8 1091 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 NSMCE1Q8WV22 266 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 GOLGA6BA6NDN3 693 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 RLBP1P12271 317 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 KMT5BQ4FZB7 885 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 CROCCP2Q86T23 111 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 GSDMBQ8TAX9 411 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 SECISBP2LQ93073 1101 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 HOXB7P09629 217 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 KRT25Q7Z3Z0 450 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 EYA1Q99502 592 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 REXO1Q8N1G1 1221 aaKnown RBP13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 ATP2A3Q93084 1043 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 IQCDQ96DY2 449 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 GNA14O95837 355 aa13.88□□□□□ -0.19
RAB3IP-212ENST00000550536 MAPK8IP1Q9UQF2 711 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 MLKLQ8NB16 471 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 SPATA5Q8NB90 893 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 ERO1AQ96HE7 468 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 NEDD9Q14511 834 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 PPFIBP2Q8ND30 876 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 NELFBQ8WX92 580 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 MYO10Q9HD67 2058 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 CLASP1Q7Z460 1538 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 CFAP221Q4G0U5 840 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 NUCKS1Q9H1E3 243 aaKnown RBP13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 VCXQ9H320 206 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 KDM2BQ8NHM5 1336 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 TXKP42681 527 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 H0YIN7 160 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 CASC4Q6P4E1 433 aa13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 DDX39AO00148 427 aaKnown RBP13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 V9GY48 417 aaPredicted RBP13.87□□□□□ -0.19
RAB3IP-212ENST00000550536 KDM5CP41229 1560 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 ASIC3Q9UHC3 531 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 RNASE9P60153 205 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 SDCCAG8Q86SQ7 713 aaPredicted RBP13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 SFMBT2Q5VUG0 894 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 RUFY4Q6ZNE9 571 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 YWHAEP62258 255 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 DPP8Q6V1X1 898 aaPredicted RBP13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 LPIN2Q92539 896 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 MCUR1Q96AQ8 359 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 CLSTN2Q9H4D0 955 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 NCOA5Q9HCD5 579 aaKnown RBP13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 CDC42BPAQ5VT25 1732 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 NUF2Q9BZD4 464 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 TBC1D7Q9P0N9 293 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 NLRP12P59046 1061 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 CUL4BQ13620 913 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 LGSNQ5TDP6 509 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 GBP6Q6ZN66 633 aa13.86□□□□□ -0.19
RAB3IP-212ENST00000550536 CCDC84Q86UT8 332 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms