RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 GPAT2Q6NUI2 795 aa20.74■□□□□ 0.91
CHMP1A-208ENST00000550102 TATDN1Q6P1N9 297 aa20.74■□□□□ 0.91
CHMP1A-208ENST00000550102 CD99L2Q8TCZ2 262 aa20.74■□□□□ 0.91
CHMP1A-208ENST00000550102 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
CHMP1A-208ENST00000550102 ADGRA2Q96PE1 1338 aa20.74■□□□□ 0.91
CHMP1A-208ENST00000550102 RNF113AO15541 343 aaKnown RBP20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 PRKAB2O43741 272 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 PLCD1P51178 756 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 AMOTL1Q8IY63 956 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 PROCA1Q8NCQ7 364 aaPredicted RBP20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 FSD1Q9BTV5 496 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 WDR18Q9BV38 432 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 LNPKQ9C0E8 428 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 STAP2Q9UGK3 403 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 TAOK2Q9UL54 1235 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 AGTPBP1Q9UPW5 1226 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 SLC45A1Q9Y2W3 748 aa20.73■□□□□ 0.91
CHMP1A-208ENST00000550102 HTTP42858 3142 aa20.72■□□□□ 0.91
CHMP1A-208ENST00000550102 JAG1P78504 1218 aa20.72■□□□□ 0.91
CHMP1A-208ENST00000550102 SHROOM1Q2M3G4 852 aaPredicted RBP20.72■□□□□ 0.91
CHMP1A-208ENST00000550102 TRIM17Q9Y577 477 aa20.72■□□□□ 0.91
CHMP1A-208ENST00000550102 SLC4A4Q9Y6R1 1079 aa20.72■□□□□ 0.91
CHMP1A-208ENST00000550102 GH2P01242 217 aa20.71■□□□□ 0.91
CHMP1A-208ENST00000550102 IGHDP01880 384 aa20.71■□□□□ 0.91
CHMP1A-208ENST00000550102 SHMT1P34896 483 aa20.71■□□□□ 0.91
CHMP1A-208ENST00000550102 PDE1AP54750 535 aa20.71■□□□□ 0.91
CHMP1A-208ENST00000550102 HMGCS2P54868 508 aa20.71■□□□□ 0.91
CHMP1A-208ENST00000550102 GABPAQ06546 454 aa20.71■□□□□ 0.91
CHMP1A-208ENST00000550102 MTMR2Q13614 643 aa20.71■□□□□ 0.91
CHMP1A-208ENST00000550102 FBXO46Q6PJ61 603 aaPredicted RBP20.71■□□□□ 0.91
CHMP1A-208ENST00000550102 OTOP1Q7RTM1 612 aa20.71■□□□□ 0.91
CHMP1A-208ENST00000550102 CCDC85CA6NKD9 419 aa20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 CYP2D6P10635 497 aa20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 IRX6P78412 446 aaPredicted RBP20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 ARHGEF6Q15052 776 aa20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 ABCB5Q2M3G0 1257 aa20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 CERKLQ49MI3 558 aaPredicted RBP20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 B4GALNT3Q6L9W6 998 aa20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 OSBP2Q969R2 916 aa20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 STRBPQ96SI9 672 aaKnown RBP20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 SWAP70Q9UH65 585 aa20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 PNMA3Q9UL41 463 aa20.7■□□□□ 0.9
CHMP1A-208ENST00000550102 CYP2C8P10632 490 aa20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 NUCB1Q02818 461 aa20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 EVX2Q03828 476 aa20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 KIF22Q14807 665 aa20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 SH3D19Q5HYK7 790 aa20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 C17orf99Q6UX52 265 aa20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 CHD1LQ86WJ1 897 aa20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 EFCC1Q9HA90 598 aa20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 ARPP21Q9UBL0 812 aaPredicted RBP20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 CPA4Q9UI42 421 aa20.69■□□□□ 0.9
CHMP1A-208ENST00000550102 GPAA1O43292 621 aa20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 GNAT2P19087 354 aa20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 BACE1P56817 501 aa20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 LACTBP83111 547 aaPredicted RBP20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 PABPC4Q13310 644 aaKnown RBP eCLIP20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 TREML2Q5T2D2 321 aa20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 SMCR8Q8TEV9 937 aaPredicted RBP20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 CABP5Q9NP86 173 aa20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 TMOD4Q9NZQ9 345 aa20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 HPS5Q9UPZ3 1129 aa20.68■□□□□ 0.9
CHMP1A-208ENST00000550102 GREB1LQ9C091 1923 aaPredicted RBP20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 C19orf81C9J6K1 198 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 USP17L10C9JJH3 530 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 USP17L12C9JPN9 530 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 USP17L21D6R901 530 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 M0R2C6 588 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 RAB3GAP1Q15042 981 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 C12orf60Q5U649 245 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 GIMAP6Q6P9H5 292 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 SLC44A5Q8NCS7 719 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 EVI5LQ96CN4 794 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 FEZ1Q99689 392 aa20.67■□□□□ 0.9
CHMP1A-208ENST00000550102 CYP2D7A0A087X1C5 515 aa20.66■□□□□ 0.9
CHMP1A-208ENST00000550102 RBBP6Q7Z6E9 1792 aaKnown RBP20.65■□□□□ 0.9
CHMP1A-208ENST00000550102 ROBO3Q96MS0 1386 aa20.65■□□□□ 0.9
CHMP1A-208ENST00000550102 GSG1L2A8MUP6 293 aa20.65■□□□□ 0.9
CHMP1A-208ENST00000550102 MPHOSPH10O00566 681 aaKnown RBP20.65■□□□□ 0.9
CHMP1A-208ENST00000550102 BCRP11274 1271 aa20.65■□□□□ 0.9
CHMP1A-208ENST00000550102 CAP1Q01518 475 aa20.65■□□□□ 0.9
CHMP1A-208ENST00000550102 ZMYM1Q5SVZ6 1142 aa20.65■□□□□ 0.9
CHMP1A-208ENST00000550102 CTR9Q6PD62 1173 aa20.65■□□□□ 0.9
CHMP1A-208ENST00000550102 DYNLL2Q96FJ2 89 aa20.65■□□□□ 0.9
CHMP1A-208ENST00000550102 GNRH1P01148 92 aa20.64■□□□□ 0.89
CHMP1A-208ENST00000550102 TDO2P48775 406 aa20.64■□□□□ 0.89
CHMP1A-208ENST00000550102 C16orf86Q6ZW13 317 aa20.64■□□□□ 0.89
CHMP1A-208ENST00000550102 ARHGAP39Q9C0H5 1083 aa20.64■□□□□ 0.89
CHMP1A-208ENST00000550102 EPB41L4AQ9HCS5 686 aaPredicted RBP20.64■□□□□ 0.89
CHMP1A-208ENST00000550102 PTPN22Q9Y2R2 807 aa20.64■□□□□ 0.89
CHMP1A-208ENST00000550102 OSBPP22059 807 aa20.63■□□□□ 0.89
CHMP1A-208ENST00000550102 IRX3P78415 501 aaPredicted RBP20.63■□□□□ 0.89
CHMP1A-208ENST00000550102 SEPT2Q15019 361 aa20.63■□□□□ 0.89
CHMP1A-208ENST00000550102 SBK1Q52WX2 424 aa20.63■□□□□ 0.89
CHMP1A-208ENST00000550102 USP17L2Q6R6M4 530 aa20.63■□□□□ 0.89
CHMP1A-208ENST00000550102 TMEM179Q6ZVK1 233 aa20.63■□□□□ 0.89
CHMP1A-208ENST00000550102 SEC62Q99442 399 aaKnown RBP20.63■□□□□ 0.89
CHMP1A-208ENST00000550102 KIAA1683Q9H0B3 1180 aa20.63■□□□□ 0.89
CHMP1A-208ENST00000550102 ASCC2Q9H1I8 757 aaPredicted RBP20.63■□□□□ 0.89
CHMP1A-208ENST00000550102 MYH4Q9Y623 1939 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms