RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 FLT1P17948 1338 aa16.7■□□□□ 0.26
CNOT2-220ENST00000549750 ELNP15502 786 aa16.7■□□□□ 0.26
CNOT2-220ENST00000549750 FLT3LGP49771 235 aa16.7■□□□□ 0.26
CNOT2-220ENST00000549750 RRP1BQ14684 758 aaKnown RBP16.7■□□□□ 0.26
CNOT2-220ENST00000549750 SH3D19Q5HYK7 790 aa16.7■□□□□ 0.26
CNOT2-220ENST00000549750 GADL1Q6ZQY3 521 aa16.7■□□□□ 0.26
CNOT2-220ENST00000549750 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
CNOT2-220ENST00000549750 ZNF280CQ8ND82 737 aa16.7■□□□□ 0.26
CNOT2-220ENST00000549750 CRISPLD2Q9H0B8 497 aa16.7■□□□□ 0.26
CNOT2-220ENST00000549750 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
CNOT2-220ENST00000549750 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
CNOT2-220ENST00000549750 GINM1Q9NU53 330 aa16.7■□□□□ 0.26
CNOT2-220ENST00000549750 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.7■□□□□ 0.26
CNOT2-220ENST00000549750 CCDC84Q86UT8 332 aaPredicted RBP16.69■□□□□ 0.26
CNOT2-220ENST00000549750 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.69■□□□□ 0.26
CNOT2-220ENST00000549750 RPAP2Q8IXW5 612 aaPredicted RBP16.69■□□□□ 0.26
CNOT2-220ENST00000549750 C7orf61Q8IZ16 206 aa16.69■□□□□ 0.26
CNOT2-220ENST00000549750 TGFBRAP1Q8WUH2 860 aa16.69■□□□□ 0.26
CNOT2-220ENST00000549750 WDR18Q9BV38 432 aa16.69■□□□□ 0.26
CNOT2-220ENST00000549750 PNMA3Q9UL41 463 aa16.69■□□□□ 0.26
CNOT2-220ENST00000549750 ZMYND8Q9ULU4 1186 aaPredicted RBP16.69■□□□□ 0.26
CNOT2-220ENST00000549750 DDX19BQ9UMR2 479 aa16.69■□□□□ 0.26
CNOT2-220ENST00000549750 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
CNOT2-220ENST00000549750 USP17L5A8MUK1 530 aa16.68■□□□□ 0.26
CNOT2-220ENST00000549750 ASNSP08243 561 aa16.68■□□□□ 0.26
CNOT2-220ENST00000549750 SPP2Q13103 211 aa16.68■□□□□ 0.26
CNOT2-220ENST00000549750 IRF5Q13568 498 aa16.68■□□□□ 0.26
CNOT2-220ENST00000549750 TDHQ8IZJ6 230 aa16.68■□□□□ 0.26
CNOT2-220ENST00000549750 SMCR8Q8TEV9 937 aaPredicted RBP16.68■□□□□ 0.26
CNOT2-220ENST00000549750 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
CNOT2-220ENST00000549750 AS3MTQ9HBK9 375 aa16.68■□□□□ 0.26
CNOT2-220ENST00000549750 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
CNOT2-220ENST00000549750 VCANP13611 3396 aa16.68■□□□□ 0.26
CNOT2-220ENST00000549750 MYH1P12882 1939 aa16.67■□□□□ 0.26
CNOT2-220ENST00000549750 CYP7A1P22680 504 aa16.67■□□□□ 0.26
CNOT2-220ENST00000549750 PABPC4Q13310 644 aaKnown RBP eCLIP16.67■□□□□ 0.26
CNOT2-220ENST00000549750 FAM110CQ1W6H9 321 aa16.67■□□□□ 0.26
CNOT2-220ENST00000549750 TREML2Q5T2D2 321 aa16.67■□□□□ 0.26
CNOT2-220ENST00000549750 AACSQ86V21 672 aa16.67■□□□□ 0.26
CNOT2-220ENST00000549750 MAPKAPK5Q8IW41 473 aa16.67■□□□□ 0.26
CNOT2-220ENST00000549750 RHPN1Q8TCX5 695 aa16.67■□□□□ 0.26
CNOT2-220ENST00000549750 DIS3LQ8TF46 1054 aaKnown RBP16.67■□□□□ 0.26
CNOT2-220ENST00000549750 TNPO2O14787 897 aaKnown RBP16.66■□□□□ 0.26
CNOT2-220ENST00000549750 HMMRO75330 724 aa16.66■□□□□ 0.26
CNOT2-220ENST00000549750 IDH1O75874 414 aaKnown RBP16.66■□□□□ 0.26
CNOT2-220ENST00000549750 GCLCP48506 637 aaPredicted RBP16.66■□□□□ 0.26
CNOT2-220ENST00000549750 MAP3K12Q12852 859 aa16.66■□□□□ 0.26
CNOT2-220ENST00000549750 DDX60LQ5H9U9 1706 aaKnown RBP16.66■□□□□ 0.26
CNOT2-220ENST00000549750 ANKLE1Q8NAG6 615 aa16.66■□□□□ 0.26
CNOT2-220ENST00000549750 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.66■□□□□ 0.26
CNOT2-220ENST00000549750 CHMP4BQ9H444 224 aaKnown RBP16.66■□□□□ 0.26
CNOT2-220ENST00000549750 HLA-DOAP06340 250 aa16.65■□□□□ 0.26
CNOT2-220ENST00000549750 MAGEA10P43363 369 aaPredicted RBP16.65■□□□□ 0.26
CNOT2-220ENST00000549750 HMGCS2P54868 508 aa16.65■□□□□ 0.26
CNOT2-220ENST00000549750 SIRT2Q8IXJ6 389 aa16.65■□□□□ 0.26
CNOT2-220ENST00000549750 MAGEB6Q8N7X4 407 aa16.65■□□□□ 0.26
CNOT2-220ENST00000549750 KIF1BPQ96EK5 621 aa16.65■□□□□ 0.26
CNOT2-220ENST00000549750 UBE2OQ9C0C9 1292 aaKnown RBP16.65■□□□□ 0.26
CNOT2-220ENST00000549750 EHD4Q9H223 541 aa16.65■□□□□ 0.26
CNOT2-220ENST00000549750 ANTXR1Q9H6X2 564 aa16.65■□□□□ 0.26
CNOT2-220ENST00000549750 PALD1Q9ULE6 856 aa16.65■□□□□ 0.26
CNOT2-220ENST00000549750 DOCK3Q8IZD9 2030 aa16.64■□□□□ 0.25
CNOT2-220ENST00000549750 C19orf81C9J6K1 198 aa16.64■□□□□ 0.25
CNOT2-220ENST00000549750 SYN1P17600 705 aa16.64■□□□□ 0.25
CNOT2-220ENST00000549750 HOXA7P31268 230 aaPredicted RBP16.64■□□□□ 0.25
CNOT2-220ENST00000549750 BACE1P56817 501 aa16.64■□□□□ 0.25
CNOT2-220ENST00000549750 DYNLL1P63167 89 aaKnown RBP16.64■□□□□ 0.25
CNOT2-220ENST00000549750 TTF1Q15361 905 aaPredicted RBP16.64■□□□□ 0.25
CNOT2-220ENST00000549750 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
CNOT2-220ENST00000549750 CRACR2BQ8N4Y2 399 aaPredicted RBP16.64■□□□□ 0.25
CNOT2-220ENST00000549750 NBPF3Q9H094 633 aa16.64■□□□□ 0.25
CNOT2-220ENST00000549750 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
CNOT2-220ENST00000549750 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
CNOT2-220ENST00000549750 COG6Q9Y2V7 657 aa16.64■□□□□ 0.25
CNOT2-220ENST00000549750 ALPK3Q96L96 1907 aa16.64■□□□□ 0.25
CNOT2-220ENST00000549750 RAB11FIP3O75154 756 aa16.63■□□□□ 0.25
CNOT2-220ENST00000549750 JAG1P78504 1218 aa16.63■□□□□ 0.25
CNOT2-220ENST00000549750 TATDN1Q6P1N9 297 aa16.63■□□□□ 0.25
CNOT2-220ENST00000549750 ANKRD13CQ8N6S4 541 aa16.63■□□□□ 0.25
CNOT2-220ENST00000549750 COA7Q96BR5 231 aa16.63■□□□□ 0.25
CNOT2-220ENST00000549750 RIOK1Q9BRS2 568 aaKnown RBP16.63■□□□□ 0.25
CNOT2-220ENST00000549750 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.63■□□□□ 0.25
CNOT2-220ENST00000549750 ASCC2Q9H1I8 757 aaPredicted RBP16.63■□□□□ 0.25
CNOT2-220ENST00000549750 IL1RAPL2Q9NP60 686 aa16.63■□□□□ 0.25
CNOT2-220ENST00000549750 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
CNOT2-220ENST00000549750 MTMR2Q13614 643 aa16.62■□□□□ 0.25
CNOT2-220ENST00000549750 MIGA1Q8NAN2 632 aa16.62■□□□□ 0.25
CNOT2-220ENST00000549750 TRIM34Q9BYJ4 488 aa16.62■□□□□ 0.25
CNOT2-220ENST00000549750 MORF4L1Q9UBU8 362 aa16.62■□□□□ 0.25
CNOT2-220ENST00000549750 NDUFB9Q9Y6M9 179 aa16.62■□□□□ 0.25
CNOT2-220ENST00000549750 TTC28Q96AY4 2481 aa16.62■□□□□ 0.25
CNOT2-220ENST00000549750 RPTORQ8N122 1335 aa16.62■□□□□ 0.25
CNOT2-220ENST00000549750 NAV1Q8NEY1 1877 aa16.61■□□□□ 0.25
CNOT2-220ENST00000549750 USP17L10C9JJH3 530 aa16.61■□□□□ 0.25
CNOT2-220ENST00000549750 USP5P45974 858 aa16.61■□□□□ 0.25
CNOT2-220ENST00000549750 PDE3AQ14432 1141 aa16.61■□□□□ 0.25
CNOT2-220ENST00000549750 FAM109BQ6ICB4 259 aaPredicted RBP16.61■□□□□ 0.25
CNOT2-220ENST00000549750 TTC6Q86TZ1 520 aa16.61■□□□□ 0.25
CNOT2-220ENST00000549750 TMOD4Q9NZQ9 345 aa16.61■□□□□ 0.25
CNOT2-220ENST00000549750 SAP30BPQ9UHR5 308 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms