RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 PNMA8AQ86V59 439 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-211ENST00000549226 DGKHQ86XP1 1220 aa16.62■□□□□ 0.25
CACNB3-211ENST00000549226 NEDD1Q8NHV4 660 aa16.62■□□□□ 0.25
CACNB3-211ENST00000549226 IGDCC4Q8TDY8 1250 aa16.62■□□□□ 0.25
CACNB3-211ENST00000549226 INTS4Q96HW7 963 aaKnown RBP16.62■□□□□ 0.25
CACNB3-211ENST00000549226 HSP90AA1P07900 732 aaKnown RBP16.61■□□□□ 0.25
CACNB3-211ENST00000549226 SHMT1P34896 483 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 EPHX2P34913 555 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 TFAP4Q01664 338 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 MAP3K10Q02779 954 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 CUL4AQ13619 759 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 SLC4A8Q2Y0W8 1093 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 ANGEL2Q5VTE6 544 aaKnown RBP16.61■□□□□ 0.25
CACNB3-211ENST00000549226 TATDN1Q6P1N9 297 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 SYNE3Q6ZMZ3 975 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 STK11IPQ8N1F8 1099 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 ANKS1AQ92625 1134 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 TCEANC2Q96MN5 208 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 DEFB129Q9H1M3 183 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 INCENPQ9NQS7 918 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 GINM1Q9NU53 330 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 GGA3Q9NZ52 723 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 TNKSO95271 1327 aa16.61■□□□□ 0.25
CACNB3-211ENST00000549226 MYH1P12882 1939 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 SMIM22K7EJ46 135 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 CHST3Q7LGC8 479 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 SLC44A5Q8NCS7 719 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 LRRC2Q9BYS8 371 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 TMEM39BQ9GZU3 492 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 PGAP2Q9UHJ9 254 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
CACNB3-211ENST00000549226 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-211ENST00000549226 DHX16O60231 1041 aaKnown RBP16.59■□□□□ 0.25
CACNB3-211ENST00000549226 CALM1P0DP23 149 aa16.59■□□□□ 0.25
CACNB3-211ENST00000549226 CALM2P0DP24 149 aa16.59■□□□□ 0.25
CACNB3-211ENST00000549226 CALM3P0DP25 149 aa16.59■□□□□ 0.25
CACNB3-211ENST00000549226 HIRAP54198 1017 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-211ENST00000549226 EVX2Q03828 476 aa16.59■□□□□ 0.25
CACNB3-211ENST00000549226 COL9A3Q14050 684 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-211ENST00000549226 SEC23AQ15436 765 aa16.59■□□□□ 0.25
CACNB3-211ENST00000549226 CERKLQ49MI3 558 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-211ENST00000549226 IFIT1BQ5T764 474 aaKnown RBP16.59■□□□□ 0.25
CACNB3-211ENST00000549226 DCAF15Q66K64 600 aa16.59■□□□□ 0.25
CACNB3-211ENST00000549226 NFXL1Q6ZNB6 911 aa16.59■□□□□ 0.25
CACNB3-211ENST00000549226 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
CACNB3-211ENST00000549226 TAF1DQ9H5J8 278 aaPredicted RBP16.59■□□□□ 0.25
CACNB3-211ENST00000549226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNB3-211ENST00000549226 SLC12A7Q9Y666 1083 aa16.59■□□□□ 0.25
CACNB3-211ENST00000549226 WDR90Q96KV7 1748 aa16.59■□□□□ 0.25
CACNB3-211ENST00000549226 KLF18A0A0U1RQI7 1052 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 PFKFB2O60825 505 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 NOVP48745 357 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 SUPT20HL1Q3ZLR7 823 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 FAM47AQ5JRC9 791 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 SULF1Q8IWU6 871 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 ENAHQ8N8S7 591 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-211ENST00000549226 GTF3C6Q969F1 213 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 TEPSINQ96N21 525 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 SLKQ9H2G2 1235 aaPredicted RBP16.58■□□□□ 0.24
CACNB3-211ENST00000549226 DNAJC18Q9H819 358 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 CWC22Q9HCG8 908 aaKnown RBP16.58■□□□□ 0.24
CACNB3-211ENST00000549226 SYNPO2Q9UMS6 1093 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 NID2Q14112 1375 aa16.58■□□□□ 0.24
CACNB3-211ENST00000549226 SCN4AP35499 1836 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 CCDC196A0A1B0GTZ2 297 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 GOLGA8BA8MQT2 603 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 DDAH1O94760 285 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 ME3Q16798 604 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 APOA5Q6Q788 366 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 NOL8Q76FK4 1167 aaKnown RBP16.57■□□□□ 0.24
CACNB3-211ENST00000549226 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 MAP3K14Q99558 947 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
CACNB3-211ENST00000549226 CABP5Q9NP86 173 aa16.57■□□□□ 0.24
CACNB3-211ENST00000549226 IGKV6D-41A0A0C4DH26 115 aa16.56■□□□□ 0.24
CACNB3-211ENST00000549226 ZBTB43O43298 467 aa16.56■□□□□ 0.24
CACNB3-211ENST00000549226 PDIA3P30101 505 aaKnown RBP16.56■□□□□ 0.24
CACNB3-211ENST00000549226 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
CACNB3-211ENST00000549226 KAT14Q9H8E8 782 aa16.56■□□□□ 0.24
CACNB3-211ENST00000549226 KANSL2Q9H9L4 492 aa16.56■□□□□ 0.24
CACNB3-211ENST00000549226 ASTN2O75129 1339 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-211ENST00000549226 CDKL5O76039 1030 aa16.55■□□□□ 0.24
CACNB3-211ENST00000549226 TTLL1O95922 423 aa16.55■□□□□ 0.24
CACNB3-211ENST00000549226 TOP1P11387 765 aaKnown RBP16.55■□□□□ 0.24
CACNB3-211ENST00000549226 PDIA4P13667 645 aaKnown RBP16.55■□□□□ 0.24
CACNB3-211ENST00000549226 AKR1B1P15121 316 aa16.55■□□□□ 0.24
CACNB3-211ENST00000549226 VEGFAP15692 232 aaPredicted RBP16.55■□□□□ 0.24
CACNB3-211ENST00000549226 METAP2P50579 478 aaKnown RBP eCLIP16.55■□□□□ 0.24
CACNB3-211ENST00000549226 ABCB5Q2M3G0 1257 aa16.55■□□□□ 0.24
CACNB3-211ENST00000549226 NKX2-3Q8TAU0 364 aa16.55■□□□□ 0.24
CACNB3-211ENST00000549226 ZKSCAN3Q9BRR0 538 aa16.55■□□□□ 0.24
CACNB3-211ENST00000549226 ZNF341Q9BYN7 854 aa16.55■□□□□ 0.24
CACNB3-211ENST00000549226 IL17RBQ9NRM6 502 aa16.55■□□□□ 0.24
CACNB3-211ENST00000549226 MTMR4Q9NYA4 1195 aa16.55■□□□□ 0.24
CACNB3-211ENST00000549226 MPHOSPH10O00566 681 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms