RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 ZNF609O15014 1411 aa1.99□□□□□ -2.09
LGR5-205ENST00000549015 ATRNO75882 1429 aa1.99□□□□□ -2.09
LGR5-205ENST00000549015 COL16A1Q07092 1604 aaPredicted RBP1.99□□□□□ -2.09
LGR5-205ENST00000549015 RTL9Q8NET4 1388 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 WNK3Q9BYP7 1800 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 DUOX1Q9NRD9 1551 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 ARFGEF2Q9Y6D5 1785 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 ZMYM6O95789 1325 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 SH3TC1Q8TE82 1336 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 WDR33Q9C0J8 1336 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 TJP1Q07157 1748 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 NRAPQ86VF7 1730 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 SHANK3Q9BYB0 1731 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 NWD2Q9ULI1 1742 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 TOGARAM1Q9Y4F4 1720 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 POTEB3A0JP26 581 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 FSD2A1L4K1 749 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 GOLGA6L3A6NEY3 463 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 A6NHS1 94 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 ERVV-1B6SEH8 477 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 OPLAHO14841 1288 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 CPNE3O75131 537 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 FRAT2O75474 233 aaPredicted RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 STARD3NLO95772 234 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 IL2RAP01589 272 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 RPLP1P05386 114 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 IGKV5-2P06315 115 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 ZFYP08048 801 aaPredicted RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 CTSHP09668 335 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 IFIT2P09913 472 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 ATP5JP18859 108 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 EIF2S2P20042 333 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 IRS1P35568 1242 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 GGCXP38435 758 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 IL15P40933 162 aaPredicted RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 GRM5P41594 1212 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 CASP7P55210 303 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 WNT7BP56706 349 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 ZNF445P59923 1031 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 SKOR1P84550 965 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 G3BP1Q13283 466 aaKnown RBP eCLIP1.98□□□□□ -2.09
LGR5-205ENST00000549015 CLN3Q13286 438 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 TEAD4Q15561 434 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 TAF1CQ15572 869 aaPredicted RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 HS1BP3Q53T59 392 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 RC3H1Q5TC82 1133 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 SH3PXD2AQ5TCZ1 1133 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 MEI1Q5TIA1 1274 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 VPS53Q5VIR6 699 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 TMEM214Q6NUQ4 689 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 POTEBQ6S5H4 581 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 PI16Q6UXB8 463 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 KIF6Q6ZMV9 814 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 TOM1L2Q6ZVM7 507 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 MCF2L2Q86YR7 1114 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 TREML1Q86YW5 311 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 CKAP2LQ8IYA6 745 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 FBXL16Q8N461 479 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 FAM184AQ8NB25 1140 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 OTUD7AQ8TE49 926 aaPredicted RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 EPS8L3Q8TE67 593 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 ANP32BQ92688 251 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 TNPO1Q92973 898 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 AIDAQ96BJ3 306 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 XAGE2Q96GT9 111 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 MRFAP1L1Q96HT8 127 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 ZNF496Q96IT1 587 aaPredicted RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 TMX3Q96JJ7 454 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 ZNF512BQ96KM6 892 aaPredicted RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 GMLQ99445 158 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 PHACTR1Q9C0D0 580 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 OSBPL2Q9H1P3 480 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 DNAJC25Q9H1X3 360 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 PIF1Q9H611 641 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 BICC1Q9H694 974 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 PHAXQ9H814 394 aaKnown RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 LGR6Q9HBX8 967 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 NEUROD4Q9HD90 331 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 CWC25Q9NXE8 425 aaPredicted RBP1.98□□□□□ -2.09
LGR5-205ENST00000549015 FAM13BQ9NYF5 915 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 TMOD3Q9NYL9 352 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 AKAP2Q9Y2D5 859 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 USP3Q9Y6I4 520 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 LTBP4Q8N2S1 1624 aa1.98□□□□□ -2.09
LGR5-205ENST00000549015 SLIT2O94813 1529 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 ELP1O95163 1332 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 WDR19Q8NEZ3 1342 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 ROBO1Q9Y6N7 1651 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 hCG_2014768A0A024R1R8 64 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 RNF223E7ERA6 249 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 UBAP1LF5GYI3 381 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 H7C1W4 665 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 EYA2O00167 538 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 GIPC1O14908 333 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 KCNQ3O43525 872 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 PHACTR2O75167 634 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 GADD45BO75293 160 aaPredicted RBP1.97□□□□□ -2.09
LGR5-205ENST00000549015 TNFRSF21O75509 655 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 MICAL2O94851 1124 aa1.97□□□□□ -2.09
LGR5-205ENST00000549015 LETM1O95202 739 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms