RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 CRY2Q49AN0 593 aa10.72□□□□□ -0.69
SLC38A1-205ENST00000548979 CCDC93Q567U6 631 aa10.72□□□□□ -0.69
SLC38A1-205ENST00000548979 DUSP27Q5VZP5 1158 aa10.72□□□□□ -0.69
SLC38A1-205ENST00000548979 STAG2Q8N3U4 1231 aa10.72□□□□□ -0.69
SLC38A1-205ENST00000548979 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
SLC38A1-205ENST00000548979 XAGE3Q8WTP9 111 aa10.72□□□□□ -0.69
SLC38A1-205ENST00000548979 RPGRQ92834 1020 aaKnown RBP10.72□□□□□ -0.69
SLC38A1-205ENST00000548979 TAOK3Q9H2K8 898 aa10.72□□□□□ -0.69
SLC38A1-205ENST00000548979 DLEC1Q9Y238 1755 aa10.72□□□□□ -0.69
SLC38A1-205ENST00000548979 ARHGEF15O94989 841 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 HSP90B1P14625 803 aaKnown RBP10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 CD33P20138 364 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 RASSF7Q02833 373 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 AIMP1Q12904 312 aaKnown RBP10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 RIC1Q4ADV7 1423 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 SLC10A5Q5PT55 438 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 C1orf53Q5VUE5 145 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 SUSD4Q5VX71 490 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 FIGNL1Q6PIW4 674 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 C1orf229Q6ZS94 237 aaPredicted RBP10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 RBM17Q96I25 401 aaKnown RBP10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 PHF24Q9UPV7 400 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
SLC38A1-205ENST00000548979 IL16Q14005 1332 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 GLTPD2A6NH11 291 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 NFKBIEO00221 500 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 PRMT3O60678 531 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 NTSR2O95665 410 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 HOXA10P31260 410 aaPredicted RBP10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 PROSER3Q2NL68 480 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 CCDC30Q5VVM6 783 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 CRAMP1Q96RY5 1269 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 CHPF2Q9P2E5 772 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 CHMP3Q9Y3E7 222 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 ANKRD31Q8N7Z5 1873 aa10.7□□□□□ -0.7
SLC38A1-205ENST00000548979 UBN2Q6ZU65 1347 aa10.69□□□□□ -0.7
SLC38A1-205ENST00000548979 EFSO43281 561 aa10.69□□□□□ -0.7
SLC38A1-205ENST00000548979 DDX58O95786 925 aaKnown RBP10.69□□□□□ -0.7
SLC38A1-205ENST00000548979 ANXA1P04083 346 aa10.69□□□□□ -0.7
SLC38A1-205ENST00000548979 VEGFAP15692 232 aaPredicted RBP10.69□□□□□ -0.7
SLC38A1-205ENST00000548979 FKBP4Q02790 459 aaKnown RBP eCLIP10.69□□□□□ -0.7
SLC38A1-205ENST00000548979 KRT24Q2M2I5 525 aa10.69□□□□□ -0.7
SLC38A1-205ENST00000548979 SUSD3Q96L08 255 aa10.69□□□□□ -0.7
SLC38A1-205ENST00000548979 NUP98P52948 1817 aa10.69□□□□□ -0.7
SLC38A1-205ENST00000548979 SH3TC1Q8TE82 1336 aa10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 FAM157BP0CG42 384 aa10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 BMP4P12644 408 aa10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 FSTL1Q12841 308 aa10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 TRIM28Q13263 835 aaKnown RBP10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 FKBP5Q13451 457 aaPredicted RBP10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 OCLNQ16625 522 aa10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 SAMD5Q5TGI4 173 aa10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 NLRP10Q86W26 655 aa10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 WDR63Q8IWG1 891 aa10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 NMRK2Q9NPI5 230 aa10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 TRMT112Q9UI30 125 aaKnown RBP10.68□□□□□ -0.7
SLC38A1-205ENST00000548979 BBOX1O75936 387 aa10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 HSPA6P17066 643 aa10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 SFSWAPQ12872 951 aaKnown RBP10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 CCDC184Q52MB2 194 aa10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 CAPN12Q6ZSI9 719 aa10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 PSMD1Q99460 953 aa10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 STK31Q9BXU1 1019 aa10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 VPS33BQ9H267 617 aa10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 RRAGCQ9HB90 399 aa10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 SBF1O95248 1867 aa10.67□□□□□ -0.7
SLC38A1-205ENST00000548979 ABCC12Q96J65 1359 aa10.66□□□□□ -0.7
SLC38A1-205ENST00000548979 ELL2O00472 640 aaPredicted RBP10.66□□□□□ -0.7
SLC38A1-205ENST00000548979 DDX46Q7L014 1031 aaKnown RBP10.66□□□□□ -0.7
SLC38A1-205ENST00000548979 TMC4Q7Z404 712 aa10.66□□□□□ -0.7
SLC38A1-205ENST00000548979 JDP2Q8WYK2 163 aa10.66□□□□□ -0.7
SLC38A1-205ENST00000548979 ISCA1Q9BUE6 129 aa10.66□□□□□ -0.7
SLC38A1-205ENST00000548979 OXCT2Q9BYC2 517 aaPredicted RBP10.66□□□□□ -0.7
SLC38A1-205ENST00000548979 KLF15Q9UIH9 416 aa10.66□□□□□ -0.7
SLC38A1-205ENST00000548979 SLX4Q8IY92 1834 aa10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 MAP2K3P46734 347 aa10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 SWI5Q1ZZU3 235 aa10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 SYNE4Q8N205 404 aa10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 C8orf58Q8NAV2 365 aa10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 SMC1BQ8NDV3 1235 aa10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 SUPT20HQ8NEM7 779 aa10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 NEUROD4Q9HD90 331 aa10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 KLK14Q9P0G3 267 aa10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 GPC6Q9Y625 555 aaPredicted RBP10.65□□□□□ -0.7
SLC38A1-205ENST00000548979 ARFGEF2Q9Y6D5 1785 aa10.65□□□□□ -0.71
SLC38A1-205ENST00000548979 COL11A2P13942 1736 aaPredicted RBP10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 FER1L6Q2WGJ9 1857 aa10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 CARNS1A5YM72 827 aa10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 IQCA1LA6NCM1 817 aa10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 BCRP11274 1271 aa10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 IARSP41252 1262 aaKnown RBP10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 PRELPP51888 382 aa10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 TWISTNBQ3B726 338 aaPredicted RBP10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 CCDC191Q8NCU4 936 aa10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 LRFN2Q9ULH4 789 aa10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 NSFL1CQ9UNZ2 370 aaKnown RBP10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 ATP6V0A2Q9Y487 856 aa10.64□□□□□ -0.71
SLC38A1-205ENST00000548979 FAM181BA6NEQ2 426 aa10.63□□□□□ -0.71
SLC38A1-205ENST00000548979 SHISA8B8ZZ34 492 aa10.63□□□□□ -0.71
SLC38A1-205ENST00000548979 HCLS1P14317 486 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms