RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 GH2P01242 217 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 PDE1AP54750 535 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 HMGCS2P54868 508 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 SP3Q02447 781 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 NOM1Q5C9Z4 860 aaKnown RBP18.99■□□□□ 0.63
DDX54-205ENST00000548786 SLC44A5Q8NCS7 719 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 ZNF280CQ8ND82 737 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 DYNLL2Q96FJ2 89 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 EHD4Q9H223 541 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 CPA4Q9UI42 421 aa18.99■□□□□ 0.63
DDX54-205ENST00000548786 ASNSP08243 561 aa18.98■□□□□ 0.63
DDX54-205ENST00000548786 SHMT1P34896 483 aa18.98■□□□□ 0.63
DDX54-205ENST00000548786 CAP1Q01518 475 aa18.98■□□□□ 0.63
DDX54-205ENST00000548786 MTMR2Q13614 643 aa18.98■□□□□ 0.63
DDX54-205ENST00000548786 TREML2Q5T2D2 321 aa18.98■□□□□ 0.63
DDX54-205ENST00000548786 FASTKD5Q7L8L6 764 aaKnown RBP18.98■□□□□ 0.63
DDX54-205ENST00000548786 APPBP2Q92624 585 aa18.98■□□□□ 0.63
DDX54-205ENST00000548786 TRIM17Q9Y577 477 aa18.98■□□□□ 0.63
DDX54-205ENST00000548786 TLR2O60603 784 aa18.97■□□□□ 0.63
DDX54-205ENST00000548786 RAB3GAP1Q15042 981 aa18.97■□□□□ 0.63
DDX54-205ENST00000548786 CERKLQ49MI3 558 aaPredicted RBP18.97■□□□□ 0.63
DDX54-205ENST00000548786 CHD1LQ86WJ1 897 aa18.97■□□□□ 0.63
DDX54-205ENST00000548786 ERO1AQ96HE7 468 aa18.97■□□□□ 0.63
DDX54-205ENST00000548786 DDRGK1Q96HY6 314 aa18.97■□□□□ 0.63
DDX54-205ENST00000548786 SEC62Q99442 399 aaKnown RBP18.97■□□□□ 0.63
DDX54-205ENST00000548786 AS3MTQ9HBK9 375 aa18.97■□□□□ 0.63
DDX54-205ENST00000548786 ZCCHC17Q9NP64 241 aaKnown RBP18.97■□□□□ 0.63
DDX54-205ENST00000548786 ZSWIM8A7E2V4 1837 aa18.97■□□□□ 0.63
DDX54-205ENST00000548786 USP17L12C9JPN9 530 aa18.96■□□□□ 0.63
DDX54-205ENST00000548786 USP17L21D6R901 530 aa18.96■□□□□ 0.63
DDX54-205ENST00000548786 MPHOSPH10O00566 681 aaKnown RBP18.96■□□□□ 0.63
DDX54-205ENST00000548786 ZFYP08048 801 aaPredicted RBP18.96■□□□□ 0.63
DDX54-205ENST00000548786 NUCB1Q02818 461 aa18.96■□□□□ 0.63
DDX54-205ENST00000548786 ABCB5Q2M3G0 1257 aa18.96■□□□□ 0.63
DDX54-205ENST00000548786 TATDN1Q6P1N9 297 aa18.96■□□□□ 0.63
DDX54-205ENST00000548786 STK11IPQ8N1F8 1099 aa18.96■□□□□ 0.63
DDX54-205ENST00000548786 STRBPQ96SI9 672 aaKnown RBP18.96■□□□□ 0.63
DDX54-205ENST00000548786 PARK7Q99497 189 aaKnown RBP18.96■□□□□ 0.63
DDX54-205ENST00000548786 ARHGAP39Q9C0H5 1083 aa18.96■□□□□ 0.63
DDX54-205ENST00000548786 ATP8A2Q9NTI2 1148 aa18.96■□□□□ 0.63
DDX54-205ENST00000548786 STAP2Q9UGK3 403 aa18.96■□□□□ 0.63
DDX54-205ENST00000548786 GPAA1O43292 621 aa18.95■□□□□ 0.62
DDX54-205ENST00000548786 ZYXQ15942 572 aaKnown RBP18.95■□□□□ 0.62
DDX54-205ENST00000548786 OTOP1Q7RTM1 612 aa18.95■□□□□ 0.62
DDX54-205ENST00000548786 AGTPBP1Q9UPW5 1226 aa18.95■□□□□ 0.62
DDX54-205ENST00000548786 LOC285556D6RIA3 1793 aa18.94■□□□□ 0.62
DDX54-205ENST00000548786 APPP05067 770 aa18.94■□□□□ 0.62
DDX54-205ENST00000548786 GABPAQ06546 454 aa18.94■□□□□ 0.62
DDX54-205ENST00000548786 LRRFIP1Q32MZ4 808 aaKnown RBP18.94■□□□□ 0.62
DDX54-205ENST00000548786 AMOTL1Q8IY63 956 aa18.94■□□□□ 0.62
DDX54-205ENST00000548786 EFCC1Q9HA90 598 aa18.94■□□□□ 0.62
DDX54-205ENST00000548786 ADGRA2Q96PE1 1338 aa18.94■□□□□ 0.62
DDX54-205ENST00000548786 GSG1L2A8MUP6 293 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 TRIM6-TRIM34B2RNG4 842 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 BACE1P56817 501 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 C12orf60Q5U649 245 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 CTR9Q6PD62 1173 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 C17orf99Q6UX52 265 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 CCDC129Q6ZRS4 1044 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 SMCR8Q8TEV9 937 aaPredicted RBP18.93■□□□□ 0.62
DDX54-205ENST00000548786 FEZ1Q99689 392 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 WDR18Q9BV38 432 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 TBC1D2Q9BYX2 928 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 CABP5Q9NP86 173 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 TMOD4Q9NZQ9 345 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 HPS5Q9UPZ3 1129 aa18.93■□□□□ 0.62
DDX54-205ENST00000548786 USP17L10C9JJH3 530 aa18.92■□□□□ 0.62
DDX54-205ENST00000548786 LACTBP83111 547 aaPredicted RBP18.92■□□□□ 0.62
DDX54-205ENST00000548786 SEPT2Q15019 361 aa18.92■□□□□ 0.62
DDX54-205ENST00000548786 PLEKHM2Q8IWE5 1019 aa18.92■□□□□ 0.62
DDX54-205ENST00000548786 PROCA1Q8NCQ7 364 aaPredicted RBP18.92■□□□□ 0.62
DDX54-205ENST00000548786 RILPL2Q969X0 211 aa18.92■□□□□ 0.62
DDX54-205ENST00000548786 EVI5LQ96CN4 794 aa18.92■□□□□ 0.62
DDX54-205ENST00000548786 EPB41L4AQ9HCS5 686 aaPredicted RBP18.92■□□□□ 0.62
DDX54-205ENST00000548786 HTTP42858 3142 aa18.92■□□□□ 0.62
DDX54-205ENST00000548786 MYH8P13535 1937 aa18.92■□□□□ 0.62
DDX54-205ENST00000548786 MINDY4BA8MYZ0 360 aa18.91■□□□□ 0.62
DDX54-205ENST00000548786 TDO2P48775 406 aa18.91■□□□□ 0.62
DDX54-205ENST00000548786 KIF22Q14807 665 aa18.91■□□□□ 0.62
DDX54-205ENST00000548786 PKN2Q16513 984 aaKnown RBP18.91■□□□□ 0.62
DDX54-205ENST00000548786 ZMYM1Q5SVZ6 1142 aa18.91■□□□□ 0.62
DDX54-205ENST00000548786 FBXO46Q6PJ61 603 aaPredicted RBP18.91■□□□□ 0.62
DDX54-205ENST00000548786 CLEC10AQ8IUN9 316 aa18.91■□□□□ 0.62
DDX54-205ENST00000548786 ACER1Q8TDN7 264 aa18.91■□□□□ 0.62
DDX54-205ENST00000548786 GINM1Q9NU53 330 aa18.91■□□□□ 0.62
DDX54-205ENST00000548786 AKR1B1P15121 316 aa18.9■□□□□ 0.62
DDX54-205ENST00000548786 GUCY1A2P33402 732 aa18.9■□□□□ 0.62
DDX54-205ENST00000548786 CDK8P49336 464 aa18.9■□□□□ 0.62
DDX54-205ENST00000548786 SH3D19Q5HYK7 790 aa18.9■□□□□ 0.62
DDX54-205ENST00000548786 ARPP21Q9UBL0 812 aaPredicted RBP18.9■□□□□ 0.62
DDX54-205ENST00000548786 SWAP70Q9UH65 585 aa18.9■□□□□ 0.62
DDX54-205ENST00000548786 SLC45A1Q9Y2W3 748 aa18.9■□□□□ 0.62
DDX54-205ENST00000548786 GNAT2P19087 354 aa18.89■□□□□ 0.61
DDX54-205ENST00000548786 CTGFP29279 349 aa18.89■□□□□ 0.61
DDX54-205ENST00000548786 ANKRD13CQ8N6S4 541 aa18.89■□□□□ 0.61
DDX54-205ENST00000548786 FAM227BQ96M60 508 aa18.89■□□□□ 0.61
DDX54-205ENST00000548786 ASCC2Q9H1I8 757 aaPredicted RBP18.89■□□□□ 0.61
DDX54-205ENST00000548786 EMILIN3Q9NT22 766 aa18.89■□□□□ 0.61
DDX54-205ENST00000548786 PNMA3Q9UL41 463 aa18.89■□□□□ 0.61
DDX54-205ENST00000548786 C19orf81C9J6K1 198 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms