RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 TATDN1Q6P1N9 297 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 ARHGAP39Q9C0H5 1083 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 DNAJC18Q9H819 358 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 ZNF532Q9HCE3 1301 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 ECHDC1Q9NTX5 307 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 TMOD4Q9NZQ9 345 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 SRRDQ9UH36 339 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 PTCH2Q9Y6C5 1203 aa13.77□□□□□ -0.21
BEST3-209ENST00000548658 USP17L10C9JJH3 530 aa13.76□□□□□ -0.21
BEST3-209ENST00000548658 HMGCS2P54868 508 aa13.76□□□□□ -0.21
BEST3-209ENST00000548658 CCDC84Q86UT8 332 aaPredicted RBP13.76□□□□□ -0.21
BEST3-209ENST00000548658 RAET1EQ8TD07 263 aa13.76□□□□□ -0.21
BEST3-209ENST00000548658 ZNF333Q96JL9 665 aa13.76□□□□□ -0.21
BEST3-209ENST00000548658 TRIM47Q96LD4 638 aa13.76□□□□□ -0.21
BEST3-209ENST00000548658 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.76□□□□□ -0.21
BEST3-209ENST00000548658 ZBTB21Q9ULJ3 1066 aa13.76□□□□□ -0.21
BEST3-209ENST00000548658 CDK5RAP2Q96SN8 1893 aa13.76□□□□□ -0.21
BEST3-209ENST00000548658 PHIPQ8WWQ0 1821 aa13.76□□□□□ -0.21
BEST3-209ENST00000548658 PTPRFP10586 1907 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 TCRBV5S4A2TA0A5A2 114 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 ADD2P35612 726 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 UBE3CQ15386 1083 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 FAM110CQ1W6H9 321 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 CERKLQ49MI3 558 aaPredicted RBP13.75□□□□□ -0.21
BEST3-209ENST00000548658 TREML2Q5T2D2 321 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 DDRGK1Q96HY6 314 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 CABP5Q9NP86 173 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 ATP8A2Q9NTI2 1148 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 MCM9Q9NXL9 1143 aa13.75□□□□□ -0.21
BEST3-209ENST00000548658 MYPNQ86TC9 1320 aa13.74□□□□□ -0.21
BEST3-209ENST00000548658 GDF11O95390 407 aa13.74□□□□□ -0.21
BEST3-209ENST00000548658 HOXA7P31268 230 aaPredicted RBP13.74□□□□□ -0.21
BEST3-209ENST00000548658 RRP1P56182 461 aaKnown RBP13.74□□□□□ -0.21
BEST3-209ENST00000548658 MTMR2Q13614 643 aa13.74□□□□□ -0.21
BEST3-209ENST00000548658 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
BEST3-209ENST00000548658 AMOTL1Q8IY63 956 aa13.74□□□□□ -0.21
BEST3-209ENST00000548658 ANKRD13CQ8N6S4 541 aa13.74□□□□□ -0.21
BEST3-209ENST00000548658 MYH1P12882 1939 aa13.74□□□□□ -0.21
BEST3-209ENST00000548658 ATAD5Q96QE3 1844 aa13.74□□□□□ -0.21
BEST3-209ENST00000548658 TNPO2O14787 897 aaKnown RBP13.73□□□□□ -0.21
BEST3-209ENST00000548658 SMARCA5O60264 1052 aaPredicted RBP13.73□□□□□ -0.21
BEST3-209ENST00000548658 GH2P01242 217 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 CTGFP29279 349 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 GRK4P32298 578 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 PLCD1P51178 756 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 USP14P54578 494 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 IRX3P78415 501 aaPredicted RBP13.73□□□□□ -0.21
BEST3-209ENST00000548658 AAMPQ13685 434 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 ABCB5Q2M3G0 1257 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 LRRFIP1Q32MZ4 808 aaKnown RBP13.73□□□□□ -0.21
BEST3-209ENST00000548658 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 COA7Q96BR5 231 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 EDC3Q96F86 508 aaKnown RBP13.73□□□□□ -0.21
BEST3-209ENST00000548658 ASCC2Q9H1I8 757 aaPredicted RBP13.73□□□□□ -0.21
BEST3-209ENST00000548658 DCP1AQ9NPI6 582 aaPredicted RBP13.73□□□□□ -0.21
BEST3-209ENST00000548658 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
BEST3-209ENST00000548658 SWAP70Q9UH65 585 aa13.73□□□□□ -0.21
BEST3-209ENST00000548658 SIPA1L1O43166 1804 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 HTTP42858 3142 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 POTEFA5A3E0 1075 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 ECM2O94769 699 aaPredicted RBP13.72□□□□□ -0.21
BEST3-209ENST00000548658 JAG1P78504 1218 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 RAB3GAP1Q15042 981 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 LCORLQ8N3X6 602 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 SLAIN1Q8ND83 568 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 GTF3C2Q8WUA4 911 aaPredicted RBP13.72□□□□□ -0.21
BEST3-209ENST00000548658 SDR42E1Q8WUS8 393 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 FEZ1Q99689 392 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 ARMT1Q9H993 441 aa13.72□□□□□ -0.21
BEST3-209ENST00000548658 TTC41PQ6P2S7 1318 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 ERC2O15083 957 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 MBD4O95243 580 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 ZFYP08048 801 aaPredicted RBP13.71□□□□□ -0.21
BEST3-209ENST00000548658 SHMT1P34896 483 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 UBXN2AP68543 259 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 PRKCZQ05513 592 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 GABPAQ06546 454 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 IRF5Q13568 498 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 NKX2-3Q8TAU0 364 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 PXYLP1Q8TE99 480 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 SH3TC2Q8TF17 1288 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 BIN2Q9UBW5 565 aaPredicted RBP13.71□□□□□ -0.21
BEST3-209ENST00000548658 PCDHB15Q9Y5E8 787 aa13.71□□□□□ -0.21
BEST3-209ENST00000548658 KIAA0100Q14667 2235 aaKnown RBP13.71□□□□□ -0.22
BEST3-209ENST00000548658 CENPFP49454 3210 aa13.71□□□□□ -0.22
BEST3-209ENST00000548658 LOC285556D6RIA3 1793 aa13.71□□□□□ -0.22
BEST3-209ENST00000548658 CAPN2P17655 700 aa13.7□□□□□ -0.22
BEST3-209ENST00000548658 FLT3LGP49771 235 aa13.7□□□□□ -0.22
BEST3-209ENST00000548658 KBTBD3Q8NAB2 608 aa13.7□□□□□ -0.22
BEST3-209ENST00000548658 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
BEST3-209ENST00000548658 C12orf42Q96LP6 360 aa13.7□□□□□ -0.22
BEST3-209ENST00000548658 KIAA1683Q9H0B3 1180 aa13.7□□□□□ -0.22
BEST3-209ENST00000548658 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
BEST3-209ENST00000548658 MORF4L1Q9UBU8 362 aa13.7□□□□□ -0.22
BEST3-209ENST00000548658 USP17L15C9J2P7 530 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 USP17L13C9JLJ4 530 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 USP17L11C9JVI0 530 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 USP17L18D6R9N7 530 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 USP17L22D6RA61 530 aa13.69□□□□□ -0.22
BEST3-209ENST00000548658 USP17L17D6RBQ6 530 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms