RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 STARD3NLO95772 234 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 GNAT2P19087 354 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 FGFR2P21802 821 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 TXLNAP40222 546 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 TUBB4BP68371 445 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 CTDSPL2Q05D32 466 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 TUBB2AQ13885 445 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 SMC1AQ14683 1233 aaKnown RBP11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 WTAPQ15007 396 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 PUM3Q15397 648 aaKnown RBP11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 APTXQ7Z2E3 356 aaKnown RBP11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 CADPS2Q86UW7 1296 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 SYNE4Q8N205 404 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 TXLNBQ8N3L3 684 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 DHX58Q96C10 678 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 TUBB2BQ9BVA1 445 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 PARD6BQ9BYG5 372 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 INCENPQ9NQS7 918 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 TMOD3Q9NYL9 352 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 LRP5O75197 1615 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 ANKRD36CQ5JPF3 1778 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 TOGARAM1Q9Y4F4 1720 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 MROH5Q6ZUA9 1318 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 GSG1L2A8MUP6 293 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 IRS4O14654 1257 aaPredicted RBP11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 SEMA3EO15041 775 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 MBD4O95243 580 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 BRD3Q15059 726 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 ZNF827Q17R98 1081 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 DNAJC10Q8IXB1 793 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 CTAGE1Q96RT6 745 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 CARD10Q9BWT7 1032 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 FUT8Q9BYC5 575 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 EPC1Q9H2F5 836 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 STRN4Q9NRL3 753 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 AATFQ9NY61 560 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 TACC3Q9Y6A5 838 aa11.26□□□□□ -0.61
SMARCD1-205ENST00000548573 PNPLA7Q6ZV29 1317 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 ERICH2A1L162 156 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 PDE8AO60658 829 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 OAS2P29728 719 aaKnown RBP11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 PBX1P40424 430 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 GPS2Q13227 327 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 SRGAP1Q7Z6B7 1085 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 MAGEB6Q8N7X4 407 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 HNRNPLLQ8WVV9 542 aaKnown RBP11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 DESI2Q9BSY9 194 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 NACAP1Q9BZK3 213 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 CSRNP2Q9H175 543 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 MRPL44Q9H9J2 332 aaKnown RBP11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 PRDM11Q9NQV5 511 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 ADGRG1Q9Y653 693 aa11.25□□□□□ -0.61
SMARCD1-205ENST00000548573 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 POLR3GO15318 223 aaPredicted RBP11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 NR5A1Q13285 461 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 KARSQ15046 597 aaKnown RBP11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 HLFQ16534 295 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 CDKAL1Q5VV42 579 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 SH3RF1Q7Z6J0 888 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 PPFIBP1Q86W92 1011 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 GRAMD1CQ8IYS0 662 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 CEP112Q8N8E3 955 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 IGSF22Q8N9C0 903 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 FANCBQ8NB91 859 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 CCDC51Q96ER9 411 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 RNF26Q9BY78 433 aaPredicted RBP11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 ADD3Q9UEY8 706 aaKnown RBP11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 ITIH6Q6UXX5 1313 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 SOWAHDA6NJG2 315 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 TULP2O00295 520 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 MAP2K7O14733 419 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 KIF5CO60282 957 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 FECHP22830 423 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 GPTP24298 496 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 HNRNPH2P55795 449 aaKnown RBP11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 CUL4BQ13620 913 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 MTF1Q14872 753 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 FILIP1LQ4L180 1135 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 RASGRP2Q7LDG7 609 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 MSL3Q8N5Y2 521 aaKnown RBP11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 GSDMAQ96QA5 445 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 ARMT1Q9H993 441 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 CABP5Q9NP86 173 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 SEC31BQ9NQW1 1179 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 CDC23Q9UJX2 597 aa11.24□□□□□ -0.61
SMARCD1-205ENST00000548573 SYNRGQ9UMZ2 1314 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 TRIM75PA6NK02 468 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 TEX33O43247 280 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 MFAP3LO75121 409 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 BMP15O95972 392 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 SLC5A1P13866 664 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 XBP1P17861 261 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 TDO2P48775 406 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 CHMP4BP1P59074 171 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms