RNA–Protein interactions for RNA: ENST00000548365.5

TGFBR1-205, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 3

Gene TGFBR1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-205ENST00000548365 ARMC10Q8N2F6 343 aa6.29□□□□□ -1.4
TGFBR1-205ENST00000548365 UBE2Q2Q8WVN8 375 aa6.29□□□□□ -1.4
TGFBR1-205ENST00000548365 SNX21Q969T3 373 aa6.29□□□□□ -1.4
TGFBR1-205ENST00000548365 NSD3Q9BZ95 1437 aa6.29□□□□□ -1.4
TGFBR1-205ENST00000548365 DNAJC25Q9H1X3 360 aa6.29□□□□□ -1.4
TGFBR1-205ENST00000548365 DDX19BQ9UMR2 479 aa6.29□□□□□ -1.4
TGFBR1-205ENST00000548365 PIK3R4Q99570 1358 aa6.29□□□□□ -1.4
TGFBR1-205ENST00000548365 POGZQ7Z3K3 1410 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 APAF1O14727 1248 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 H2AFB1P0C5Y9 115 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 H2AFB2P0C5Z0 115 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 ITPKAP23677 461 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 MRE11P49959 708 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 RARSP54136 660 aaKnown RBP6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 IKBKEQ14164 716 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 ENOX2Q16206 610 aaKnown RBP6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 ALDH1L2Q3SY69 923 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 TRIM56Q9BRZ2 755 aaKnown RBP6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 ZNF576Q9H609 170 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 CHMP5Q9NZZ3 219 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 WWC3Q9ULE0 1092 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 ARHGEF40Q8TER5 1519 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 TULP4Q9NRJ4 1543 aa6.28□□□□□ -1.4
TGFBR1-205ENST00000548365 ECEL1O95672 775 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 CANXP27824 592 aaKnown RBP6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 RBM25P49756 843 aaKnown RBP6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 FMR1Q06787 632 aaKnown RBP eCLIP6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 PCDH1Q08174 1060 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 C19orf57Q0VDD7 668 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 FAAP100Q0VG06 881 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 MVPQ14764 893 aaKnown RBP6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 DUOXA2Q1HG44 320 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 GLIPR1L2Q4G1C9 344 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 PRSS36Q5K4E3 855 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 ZKSCAN2Q63HK3 967 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 PRPF40BQ6NWY9 871 aaKnown RBP6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 SMC5Q8IY18 1101 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 FAM46AQ96IP4 442 aaKnown RBP6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 C14orf93Q9H972 538 aaKnown RBP6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 ERCC6L2Q5T890 1561 aa6.27□□□□□ -1.41
TGFBR1-205ENST00000548365 PTCH1Q13635 1447 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 NPATQ14207 1427 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 PNMA6FA0A0J9YX94 578 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 LOC100289279A0A1B0GTE1 492 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 FRAT2O75474 233 aaPredicted RBP6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 TERF1P54274 439 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 CABP4P57796 275 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 PLCB3Q01970 1234 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 CALD1Q05682 793 aaKnown RBP6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 FAM117BQ6P1L5 589 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 CLEC17AQ6ZS10 378 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 ARHGAP45Q92619 1136 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 ASB16Q96NS5 453 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 EHD4Q9H223 541 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 CLEC4MQ9H2X3 399 aaPredicted RBP6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 SOX17Q9H6I2 414 aaPredicted RBP6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 PNPLA6Q8IY17 1366 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 ATP7BP35670 1465 aa6.26□□□□□ -1.41
TGFBR1-205ENST00000548365 EVC2Q86UK5 1308 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 TMEM238LA0A1B0GVL6 79 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 GOLGA6L3A6NEY3 463 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 IPO8O15397 1037 aaKnown RBP6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 B3GALT4O96024 378 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 GLB1P16278 677 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 XP32Q5T750 250 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 PRR23CQ6ZRP0 262 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 GBP4Q96PP9 640 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 TMPRSS13Q9BYE2 586 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 RNF19AQ9NV58 838 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 KNDC1Q76NI1 1749 aa6.25□□□□□ -1.41
TGFBR1-205ENST00000548365 CDK12Q9NYV4 1490 aaPredicted RBP6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 P4HBP07237 508 aaKnown RBP6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 MCM4P33991 863 aa6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 DDIT3P35638 169 aa6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 PREPP48147 710 aa6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 RGS3P49796 1198 aa6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 HS1BP3Q53T59 392 aa6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 MORC1Q86VD1 984 aa6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 AEBP1Q8IUX7 1158 aa6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 HSCBQ8IWL3 235 aa6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 GCC1Q96CN9 775 aa6.24□□□□□ -1.41
TGFBR1-205ENST00000548365 PREX1Q8TCU6 1659 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 MEGF11A6BM72 1044 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 RRP9O43818 475 aaKnown RBP6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 BCAR3O75815 825 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 IGHDP01880 384 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 GSTM4Q03013 218 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 BMP2KLQ5H9B9 411 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 NXPE4Q6UWF7 544 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 TCP11L2Q8N4U5 519 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 C3orf58Q8NDZ4 430 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 BCO2Q9BYV7 579 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 C22orf23Q9BZE7 217 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 OSBPL7Q9BZF2 842 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 N4BP2Q86UW6 1770 aaPredicted RBP6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 NRKQ7Z2Y5 1582 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 DIP2CQ9Y2E4 1556 aa6.23□□□□□ -1.41
TGFBR1-205ENST00000548365 SIGLEC1Q9BZZ2 1709 aa6.22□□□□□ -1.41
TGFBR1-205ENST00000548365 TMEM131LA2VDJ0 1609 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms