RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 GABPAQ06546 454 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 NIM1KQ8IY84 436 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 BCS1LQ9Y276 419 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 MYO3BQ8WXR4 1341 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 RBM5P52756 815 aaKnown RBP eCLIP15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 FOSBP53539 338 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 TROAPQ12815 778 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 RESTQ13127 1097 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 RTN1Q16799 776 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 CFAP100Q494V2 611 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 ZFPM1Q8IX07 1006 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 FANCBQ8NB91 859 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 ANKS1AQ92625 1134 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 IDI2Q9BXS1 227 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 TCP11L1Q9NUJ3 509 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 ATP6V1DQ9Y5K8 247 aa15.9■□□□□ 0.14
SMPDL3B-205ENST00000548116 H3BQV1 296 aa15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 PRPF40AO75400 957 aaKnown RBP15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 CDKL5O76039 1030 aa15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 IFNAR1P17181 557 aa15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 CACNB3P54284 484 aa15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 IFFO2Q5TF58 517 aa15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 TTC6Q86TZ1 520 aa15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 ZNF444Q8N0Y2 327 aaPredicted RBP15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 PHKBQ93100 1093 aa15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 FAM198AQ9UFP1 575 aa15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 ARFGEF1Q9Y6D6 1849 aa15.89■□□□□ 0.13
SMPDL3B-205ENST00000548116 DNM1Q05193 864 aaKnown RBP15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 CXCL9Q07325 125 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 CPLX2Q6PUV4 134 aaKnown RBP15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 CATIPQ7Z7H3 387 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 NUP133Q8WUM0 1156 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 PRMT6Q96LA8 375 aaPredicted RBP15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 ZNF287Q9HBT7 754 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 GDPD2Q9HCC8 539 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 CNPY2Q9Y2B0 182 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 ZBTB12Q9Y330 459 aaPredicted RBP15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 SIPA1L1O43166 1804 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 DDAH1O94760 285 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 TSPY3P0CV98 308 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 TSPY8P0CW00 308 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 FAM173BQ6P4H8 233 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 NBPF11Q86T75 865 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 DGKHQ86XP1 1220 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 STK36Q9NRP7 1315 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 LTBP3Q9NS15 1303 aa15.88■□□□□ 0.13
SMPDL3B-205ENST00000548116 UBE2Q2LH0YL09 131 aa15.87■□□□□ 0.13
SMPDL3B-205ENST00000548116 FMNL1O95466 1100 aaPredicted RBP15.87■□□□□ 0.13
SMPDL3B-205ENST00000548116 PRELPP51888 382 aa15.87■□□□□ 0.13
SMPDL3B-205ENST00000548116 GUCY1B3Q02153 619 aa15.87■□□□□ 0.13
SMPDL3B-205ENST00000548116 OTUD7BQ6GQQ9 843 aa15.87■□□□□ 0.13
SMPDL3B-205ENST00000548116 TMEM87AQ8NBN3 555 aa15.87■□□□□ 0.13
SMPDL3B-205ENST00000548116 NEDD1Q8NHV4 660 aa15.87■□□□□ 0.13
SMPDL3B-205ENST00000548116 AIFM3Q96NN9 605 aa15.87■□□□□ 0.13
SMPDL3B-205ENST00000548116 TDRD3Q9H7E2 651 aaKnown RBP15.87■□□□□ 0.13
SMPDL3B-205ENST00000548116 CCDC196A0A1B0GTZ2 297 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 PPP2R5BQ15173 497 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 SKOR2Q2VWA4 1001 aaPredicted RBP15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 SH3BP5LQ7L8J4 393 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 CMTR1Q8N1G2 835 aaKnown RBP15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 CRACR2BQ8N4Y2 399 aaPredicted RBP15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 AGBL3Q8NEM8 1001 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 FBXO18Q8NFZ0 1043 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 C8orf76Q96K31 380 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 SPON1Q9HCB6 807 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 GJB4Q9NTQ9 266 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 SPDYE2BA6NHP3 402 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 SPDYE6P0CI01 402 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 CALM1P0DP23 149 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 CALM2P0DP24 149 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 CALM3P0DP25 149 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 RASSF7Q02833 373 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 SSRP1Q08945 709 aaKnown RBP15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 FUT2Q10981 343 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 CCDC178Q5BJE1 867 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 USP48Q86UV5 1035 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 RGS22Q8NE09 1264 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 ALG1Q9BT22 464 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 SLC26A6Q9BXS9 759 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 ZSCAN16Q9H4T2 348 aaPredicted RBP15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 SERPINB13Q9UIV8 391 aa15.86■□□□□ 0.13
SMPDL3B-205ENST00000548116 PLIN4Q96Q06 1357 aa15.85■□□□□ 0.13
SMPDL3B-205ENST00000548116 DDTLA6NHG4 134 aaPredicted RBP15.85■□□□□ 0.13
SMPDL3B-205ENST00000548116 SHMT1P34896 483 aa15.85■□□□□ 0.13
SMPDL3B-205ENST00000548116 NOVP48745 357 aa15.85■□□□□ 0.13
SMPDL3B-205ENST00000548116 TCP10Q12799 353 aa15.85■□□□□ 0.13
SMPDL3B-205ENST00000548116 JDP2Q8WYK2 163 aa15.85■□□□□ 0.13
SMPDL3B-205ENST00000548116 EHD4Q9H223 541 aa15.85■□□□□ 0.13
SMPDL3B-205ENST00000548116 MYH8P13535 1937 aa15.85■□□□□ 0.13
SMPDL3B-205ENST00000548116 SLURP2P0DP57 97 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 GUCY1A2P33402 732 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 KLHL40Q2TBA0 621 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 CIAPIN1Q6FI81 312 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 GPT2Q8TD30 523 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 DNAJC18Q9H819 358 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 RBM28Q9NW13 759 aaKnown RBP15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 SWAP70Q9UH65 585 aa15.84■□□□□ 0.13
SMPDL3B-205ENST00000548116 MYH15Q9Y2K3 1946 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms