RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 FXR1P51114 621 aaKnown RBP eCLIP24.87■■□□□ 1.57
SSH1-207ENST00000547862 PPP4CP60510 307 aa24.87■■□□□ 1.57
SSH1-207ENST00000547862 CEP85Q6P2H3 762 aa24.87■■□□□ 1.57
SSH1-207ENST00000547862 MAGEB6Q8N7X4 407 aa24.87■■□□□ 1.57
SSH1-207ENST00000547862 PANK1Q8TE04 598 aa24.87■■□□□ 1.57
SSH1-207ENST00000547862 HTATIP2Q9BUP3 242 aa24.87■■□□□ 1.57
SSH1-207ENST00000547862 BCL11AQ9H165 835 aa24.87■■□□□ 1.57
SSH1-207ENST00000547862 NOP58Q9Y2X3 529 aaKnown RBP24.87■■□□□ 1.57
SSH1-207ENST00000547862 PEX10O60683 326 aa24.86■■□□□ 1.57
SSH1-207ENST00000547862 USP5P45974 858 aa24.86■■□□□ 1.57
SSH1-207ENST00000547862 SH3D19Q5HYK7 790 aa24.86■■□□□ 1.57
SSH1-207ENST00000547862 AACSQ86V21 672 aa24.86■■□□□ 1.57
SSH1-207ENST00000547862 PXYLP1Q8TE99 480 aa24.86■■□□□ 1.57
SSH1-207ENST00000547862 ZNF512BQ96KM6 892 aaPredicted RBP24.86■■□□□ 1.57
SSH1-207ENST00000547862 ZBTB21Q9ULJ3 1066 aa24.86■■□□□ 1.57
SSH1-207ENST00000547862 DDX60LQ5H9U9 1706 aaKnown RBP24.86■■□□□ 1.57
SSH1-207ENST00000547862 TRIOBPQ9H2D6 2365 aa24.85■■□□□ 1.57
SSH1-207ENST00000547862 SGPL1O95470 568 aa24.85■■□□□ 1.57
SSH1-207ENST00000547862 TFRCP02786 760 aaKnown RBP24.85■■□□□ 1.57
SSH1-207ENST00000547862 BACE1P56817 501 aa24.84■■□□□ 1.57
SSH1-207ENST00000547862 UBE2Q1Q7Z7E8 422 aa24.84■■□□□ 1.57
SSH1-207ENST00000547862 WDR18Q9BV38 432 aa24.84■■□□□ 1.57
SSH1-207ENST00000547862 ANTXR1Q9H6X2 564 aa24.84■■□□□ 1.57
SSH1-207ENST00000547862 ZYXQ15942 572 aaKnown RBP24.83■■□□□ 1.57
SSH1-207ENST00000547862 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.83■■□□□ 1.57
SSH1-207ENST00000547862 IL1RAPL2Q9NP60 686 aa24.83■■□□□ 1.57
SSH1-207ENST00000547862 APBB1O00213 710 aa24.82■■□□□ 1.56
SSH1-207ENST00000547862 FOXP4Q8IVH2 680 aaPredicted RBP24.82■■□□□ 1.56
SSH1-207ENST00000547862 PAGR1Q9BTK6 254 aa24.82■■□□□ 1.56
SSH1-207ENST00000547862 MYH8P13535 1937 aa24.82■■□□□ 1.56
SSH1-207ENST00000547862 USP17L10C9JJH3 530 aa24.81■■□□□ 1.56
SSH1-207ENST00000547862 GH2P01242 217 aa24.81■■□□□ 1.56
SSH1-207ENST00000547862 HMGCRP04035 888 aa24.81■■□□□ 1.56
SSH1-207ENST00000547862 TRIM32Q13049 653 aa24.81■■□□□ 1.56
SSH1-207ENST00000547862 DIEXFQ68CQ4 756 aaKnown RBP24.81■■□□□ 1.56
SSH1-207ENST00000547862 P2RX7Q99572 595 aaKnown RBP24.81■■□□□ 1.56
SSH1-207ENST00000547862 FEZ1Q99689 392 aa24.81■■□□□ 1.56
SSH1-207ENST00000547862 HERVK_113P62684 666 aa24.8■■□□□ 1.56
SSH1-207ENST00000547862 MAP3K12Q12852 859 aa24.8■■□□□ 1.56
SSH1-207ENST00000547862 ERC1Q8IUD2 1116 aa24.8■■□□□ 1.56
SSH1-207ENST00000547862 TXNRD2Q9NNW7 524 aa24.8■■□□□ 1.56
SSH1-207ENST00000547862 PAK6Q9NQU5 681 aaPredicted RBP24.8■■□□□ 1.56
SSH1-207ENST00000547862 MORF4L1Q9UBU8 362 aa24.8■■□□□ 1.56
SSH1-207ENST00000547862 ZBED9Q6R2W3 1325 aa24.8■■□□□ 1.56
SSH1-207ENST00000547862 CYP2B6P20813 491 aa24.79■■□□□ 1.56
SSH1-207ENST00000547862 METTL16Q86W50 562 aaKnown RBP24.79■■□□□ 1.56
SSH1-207ENST00000547862 DIS3LQ8TF46 1054 aaKnown RBP24.79■■□□□ 1.56
SSH1-207ENST00000547862 RBM27Q9P2N5 1060 aaKnown RBP24.79■■□□□ 1.56
SSH1-207ENST00000547862 NR2E3Q9Y5X4 410 aa24.79■■□□□ 1.56
SSH1-207ENST00000547862 C19orf81C9J6K1 198 aa24.78■■□□□ 1.56
SSH1-207ENST00000547862 EVI5O60447 810 aa24.77■■□□□ 1.56
SSH1-207ENST00000547862 HOXA7P31268 230 aaPredicted RBP24.77■■□□□ 1.56
SSH1-207ENST00000547862 RAB3GAP1Q15042 981 aa24.77■■□□□ 1.56
SSH1-207ENST00000547862 USP17L2Q6R6M4 530 aa24.77■■□□□ 1.56
SSH1-207ENST00000547862 CCAR1Q8IX12 1150 aaKnown RBP24.77■■□□□ 1.56
SSH1-207ENST00000547862 TRIB2Q92519 343 aa24.77■■□□□ 1.56
SSH1-207ENST00000547862 PAWRQ96IZ0 340 aaKnown RBP24.77■■□□□ 1.56
SSH1-207ENST00000547862 CWC22Q9HCG8 908 aaKnown RBP24.77■■□□□ 1.56
SSH1-207ENST00000547862 GJD2Q9UKL4 321 aa24.77■■□□□ 1.56
SSH1-207ENST00000547862 GPRC5AQ8NFJ5 357 aa24.76■■□□□ 1.55
SSH1-207ENST00000547862 DNAJC2Q99543 621 aaKnown RBP24.76■■□□□ 1.55
SSH1-207ENST00000547862 EMILIN3Q9NT22 766 aa24.76■■□□□ 1.55
SSH1-207ENST00000547862 GINM1Q9NU53 330 aa24.76■■□□□ 1.55
SSH1-207ENST00000547862 SERPINB13Q9UIV8 391 aa24.76■■□□□ 1.55
SSH1-207ENST00000547862 FRMPD3Q5JV73 1810 aa24.76■■□□□ 1.55
SSH1-207ENST00000547862 MYH7P12883 1935 aa24.75■■□□□ 1.55
SSH1-207ENST00000547862 IGSF3O75054 1194 aa24.75■■□□□ 1.55
SSH1-207ENST00000547862 ERVK-9P63128 1117 aa24.75■■□□□ 1.55
SSH1-207ENST00000547862 ERVK-24P63145 666 aa24.75■■□□□ 1.55
SSH1-207ENST00000547862 PDE3AQ14432 1141 aa24.75■■□□□ 1.55
SSH1-207ENST00000547862 CERS3Q8IU89 383 aa24.75■■□□□ 1.55
SSH1-207ENST00000547862 RHPN1Q8TCX5 695 aa24.75■■□□□ 1.55
SSH1-207ENST00000547862 CRISPLD2Q9H0B8 497 aa24.75■■□□□ 1.55
SSH1-207ENST00000547862 HMX1Q9NP08 348 aaPredicted RBP24.75■■□□□ 1.55
SSH1-207ENST00000547862 BAZ2AQ9UIF9 1905 aaKnown RBP24.74■■□□□ 1.55
SSH1-207ENST00000547862 MAGEB6P1A0A0J9YX57 407 aa24.74■■□□□ 1.55
SSH1-207ENST00000547862 SOCS4Q8WXH5 440 aa24.74■■□□□ 1.55
SSH1-207ENST00000547862 NUDT12Q9BQG2 462 aa24.74■■□□□ 1.55
SSH1-207ENST00000547862 PORCNQ9H237 461 aa24.74■■□□□ 1.55
SSH1-207ENST00000547862 RPTORQ8N122 1335 aa24.73■■□□□ 1.55
SSH1-207ENST00000547862 POLR3DP05423 398 aaPredicted RBP24.73■■□□□ 1.55
SSH1-207ENST00000547862 ABCB5Q2M3G0 1257 aa24.73■■□□□ 1.55
SSH1-207ENST00000547862 CERKLQ49MI3 558 aaPredicted RBP24.73■■□□□ 1.55
SSH1-207ENST00000547862 HSP90AB4PQ58FF6 505 aa24.73■■□□□ 1.55
SSH1-207ENST00000547862 NECAB2Q7Z6G3 386 aa24.73■■□□□ 1.55
SSH1-207ENST00000547862 TTC6Q86TZ1 520 aa24.73■■□□□ 1.55
SSH1-207ENST00000547862 RBPJLQ9UBG7 517 aa24.73■■□□□ 1.55
SSH1-207ENST00000547862 GOLIM4O00461 696 aa24.72■■□□□ 1.55
SSH1-207ENST00000547862 PRKAR2AP13861 404 aaKnown RBP24.72■■□□□ 1.55
SSH1-207ENST00000547862 PDE6AP16499 860 aa24.72■■□□□ 1.55
SSH1-207ENST00000547862 ZKSCAN1P17029 563 aaPredicted RBP24.72■■□□□ 1.55
SSH1-207ENST00000547862 WDR78Q5VTH9 848 aa24.72■■□□□ 1.55
SSH1-207ENST00000547862 TATDN1Q6P1N9 297 aa24.72■■□□□ 1.55
SSH1-207ENST00000547862 RIOK1Q9BRS2 568 aaKnown RBP24.72■■□□□ 1.55
SSH1-207ENST00000547862 EHD4Q9H223 541 aa24.72■■□□□ 1.55
SSH1-207ENST00000547862 COG6Q9Y2V7 657 aa24.72■■□□□ 1.55
SSH1-207ENST00000547862 MAPK4P31152 587 aa24.71■■□□□ 1.55
SSH1-207ENST00000547862 PLCD1P51178 756 aa24.71■■□□□ 1.55
SSH1-207ENST00000547862 EVX2Q03828 476 aa24.71■■□□□ 1.55
SSH1-207ENST00000547862 TTF1Q15361 905 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms