RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 MAN1B1Q9UKM7 699 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 SCN7AQ01118 1682 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
LETMD1-209ENST00000547318 DDAH1O94760 285 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 ZNF18P17022 549 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 CYP7A1P22680 504 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 CRKLP46109 303 aaKnown RBP16.72■□□□□ 0.27
LETMD1-209ENST00000547318 GABPB1Q06547 395 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-209ENST00000547318 CHRNDQ07001 517 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 SMARCC1Q92922 1105 aaPredicted RBP16.72■□□□□ 0.27
LETMD1-209ENST00000547318 TOMM22Q9NS69 142 aa16.72■□□□□ 0.27
LETMD1-209ENST00000547318 MYH6P13533 1939 aa16.71■□□□□ 0.27
LETMD1-209ENST00000547318 NRAPQ86VF7 1730 aa16.71■□□□□ 0.27
LETMD1-209ENST00000547318 TRIM75PA6NK02 468 aa16.71■□□□□ 0.27
LETMD1-209ENST00000547318 ATP1A3P13637 1013 aa16.71■□□□□ 0.27
LETMD1-209ENST00000547318 KRT2P35908 639 aa16.71■□□□□ 0.27
LETMD1-209ENST00000547318 TBX2Q13207 712 aaPredicted RBP16.71■□□□□ 0.27
LETMD1-209ENST00000547318 RRP12Q5JTH9 1297 aaKnown RBP16.71■□□□□ 0.27
LETMD1-209ENST00000547318 CATIPQ7Z7H3 387 aa16.71■□□□□ 0.27
LETMD1-209ENST00000547318 IQCA1Q86XH1 822 aa16.71■□□□□ 0.27
LETMD1-209ENST00000547318 SYTL4Q96C24 671 aaPredicted RBP16.71■□□□□ 0.27
LETMD1-209ENST00000547318 MAST2Q6P0Q8 1798 aa16.71■□□□□ 0.27
LETMD1-209ENST00000547318 ZSCAN20P17040 1043 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-209ENST00000547318 BCAMP50895 628 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 PLCD1P51178 756 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 CBX1P83916 185 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 FANCLQ9NW38 375 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 TACC3Q9Y6A5 838 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 TNKSO95271 1327 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-209ENST00000547318 POLR2DO15514 142 aaKnown RBP16.7■□□□□ 0.26
LETMD1-209ENST00000547318 ACTN4O43707 911 aaKnown RBP16.7■□□□□ 0.26
LETMD1-209ENST00000547318 SF3B3Q15393 1217 aaKnown RBP16.7■□□□□ 0.26
LETMD1-209ENST00000547318 CAVIN4Q5BKX8 364 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 SPECC1LQ69YQ0 1117 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 HOMER1Q86YM7 354 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-209ENST00000547318 ZSCAN10Q96SZ4 725 aaPredicted RBP16.7■□□□□ 0.26
LETMD1-209ENST00000547318 PHF20Q9BVI0 1012 aa16.7■□□□□ 0.26
LETMD1-209ENST00000547318 NIP7Q9Y221 180 aaKnown RBP eCLIP16.7■□□□□ 0.26
LETMD1-209ENST00000547318 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 ROBO1Q9Y6N7 1651 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 PRKAB2O43741 272 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 GUCY1A2P33402 732 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 ATP6V1AP38606 617 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 ANKRD18AQ8IVF6 992 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 CTAGE1Q96RT6 745 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 SEC31BQ9NQW1 1179 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.69■□□□□ 0.26
LETMD1-209ENST00000547318 LOC102724428A0A0B4J2F2 783 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 SIK1P57059 783 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 SYT10Q6XYQ8 523 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 GSDMAQ96QA5 445 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 NAA15Q9BXJ9 866 aaKnown RBP16.69■□□□□ 0.26
LETMD1-209ENST00000547318 BSDC1Q9NW68 430 aaPredicted RBP16.69■□□□□ 0.26
LETMD1-209ENST00000547318 SERTAD1Q9UHV2 236 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 DNAI1Q9UI46 699 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 KCNJ14Q9UNX9 436 aa16.69■□□□□ 0.26
LETMD1-209ENST00000547318 LAMB1P07942 1786 aa16.68■□□□□ 0.26
LETMD1-209ENST00000547318 KIF20AO95235 890 aa16.68■□□□□ 0.26
LETMD1-209ENST00000547318 SLFN14P0C7P3 912 aa16.68■□□□□ 0.26
LETMD1-209ENST00000547318 CDK11BP21127 795 aaKnown RBP16.68■□□□□ 0.26
LETMD1-209ENST00000547318 RIOK1Q9BRS2 568 aaKnown RBP16.68■□□□□ 0.26
LETMD1-209ENST00000547318 NFE2L3Q9Y4A8 694 aa16.68■□□□□ 0.26
LETMD1-209ENST00000547318 PCDHB6Q9Y5E3 794 aa16.68■□□□□ 0.26
LETMD1-209ENST00000547318 KIAA1551Q9HCM1 1747 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 ORC4O43929 436 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 BMP6P22004 513 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 SEMA3FQ13275 785 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 DDB1Q16531 1140 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
LETMD1-209ENST00000547318 FAM177A1Q8N128 213 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-209ENST00000547318 KRT222Q8N1A0 295 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 NUP133Q8WUM0 1156 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 DPF2Q92785 391 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 INCENPQ9NQS7 918 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 ARGLU1Q9NWB6 273 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-209ENST00000547318 FAM53CQ9NYF3 392 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 RAI14Q9P0K7 980 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 IQSEC3Q9UPP2 1182 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-209ENST00000547318 ISM2Q6H9L7 571 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
LETMD1-209ENST00000547318 BAG1Q99933 345 aaPredicted RBP16.67■□□□□ 0.26
LETMD1-209ENST00000547318 SPATA31A1Q5TZJ5 1347 aa16.66■□□□□ 0.26
LETMD1-209ENST00000547318 H2AFXP16104 143 aaPredicted RBP16.66■□□□□ 0.26
LETMD1-209ENST00000547318 FUT2Q10981 343 aa16.66■□□□□ 0.26
LETMD1-209ENST00000547318 SPATA1Q5VX52 437 aa16.66■□□□□ 0.26
LETMD1-209ENST00000547318 TMEM139Q8IV31 216 aa16.66■□□□□ 0.26
LETMD1-209ENST00000547318 REXO1L1PQ8IX06 675 aa16.66■□□□□ 0.26
LETMD1-209ENST00000547318 ENAHQ8N8S7 591 aaPredicted RBP16.66■□□□□ 0.26
LETMD1-209ENST00000547318 PANX2Q96RD6 677 aa16.66■□□□□ 0.26
LETMD1-209ENST00000547318 ARID3AQ99856 593 aa16.66■□□□□ 0.26
LETMD1-209ENST00000547318 CABP5Q9NP86 173 aa16.66■□□□□ 0.26
LETMD1-209ENST00000547318 A0A1B0GTH6 734 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 EFCAB8A8MWE9 144 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 PDE4BQ07343 736 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 TRIM65Q6PJ69 517 aa16.65■□□□□ 0.26
LETMD1-209ENST00000547318 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms