RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 ZNF280CQ8ND82 737 aa12.53□□□□□ -0.4
BEST3-208ENST00000547208 ZNF333Q96JL9 665 aa12.53□□□□□ -0.4
BEST3-208ENST00000547208 TBC1D2Q9BYX2 928 aa12.53□□□□□ -0.4
BEST3-208ENST00000547208 PARP14Q460N5 1801 aa12.53□□□□□ -0.4
BEST3-208ENST00000547208 USP17L5A8MUK1 530 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 SMARCA5O60264 1052 aaPredicted RBP12.52□□□□□ -0.41
BEST3-208ENST00000547208 PSMC4P43686 418 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 KIF22Q14807 665 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 SLC4A8Q2Y0W8 1093 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 SH3D19Q5HYK7 790 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 PROCA1Q8NCQ7 364 aaPredicted RBP12.52□□□□□ -0.41
BEST3-208ENST00000547208 DNAJC2Q99543 621 aaKnown RBP12.52□□□□□ -0.41
BEST3-208ENST00000547208 HAUS7Q99871 368 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 WDR18Q9BV38 432 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 LRRCC1Q9C099 1032 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 EHD4Q9H223 541 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 DCTPP1Q9H773 170 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 ZNF532Q9HCE3 1301 aa12.52□□□□□ -0.41
BEST3-208ENST00000547208 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
BEST3-208ENST00000547208 GDF11O95390 407 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 MYCP01106 439 aaPredicted RBP12.51□□□□□ -0.41
BEST3-208ENST00000547208 CHGBP05060 677 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 HLA-DOAP06340 250 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 ASNSP08243 561 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 OSBPP22059 807 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 USP5P45974 858 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 HMGCS2P54868 508 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 PRMT2P55345 433 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 SLFNL1Q499Z3 407 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 CRACR2BQ8N4Y2 399 aaPredicted RBP12.51□□□□□ -0.41
BEST3-208ENST00000547208 BCL11AQ9H165 835 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 BOLA2Q9H3K6 86 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 GINM1Q9NU53 330 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 PAG1Q9NWQ8 432 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 ZBTB21Q9ULJ3 1066 aa12.51□□□□□ -0.41
BEST3-208ENST00000547208 COLQQ9Y215 455 aaPredicted RBP12.51□□□□□ -0.41
BEST3-208ENST00000547208 RLFQ13129 1914 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 ADD2P35612 726 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 PLCD1P51178 756 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 EVX2Q03828 476 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 MTMR2Q13614 643 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 SLC9C1Q4G0N8 1177 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 LCORLQ8N3X6 602 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 SH3TC2Q8TF17 1288 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 SRRDQ9UH36 339 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 SERPINB13Q9UIV8 391 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 PCDHB15Q9Y5E8 787 aa12.5□□□□□ -0.41
BEST3-208ENST00000547208 GREB1LQ9C091 1923 aaPredicted RBP12.5□□□□□ -0.41
BEST3-208ENST00000547208 SHMT1P34896 483 aa12.49□□□□□ -0.41
BEST3-208ENST00000547208 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
BEST3-208ENST00000547208 BACE1P56817 501 aa12.49□□□□□ -0.41
BEST3-208ENST00000547208 GABPAQ06546 454 aa12.49□□□□□ -0.41
BEST3-208ENST00000547208 TRIM34Q9BYJ4 488 aa12.49□□□□□ -0.41
BEST3-208ENST00000547208 MYPNQ86TC9 1320 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 FMNL1O95466 1100 aaPredicted RBP12.48□□□□□ -0.41
BEST3-208ENST00000547208 GH2P01242 217 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 FCGRTP55899 365 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 PRKCZQ05513 592 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 NBPF11Q86T75 865 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 TTC6Q86TZ1 520 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 ANKRD13CQ8N6S4 541 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 SMCR8Q8TEV9 937 aaPredicted RBP12.48□□□□□ -0.41
BEST3-208ENST00000547208 SDR42E1Q8WUS8 393 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 CRNKL1Q9BZJ0 848 aaKnown RBP12.48□□□□□ -0.41
BEST3-208ENST00000547208 ASCC2Q9H1I8 757 aaPredicted RBP12.48□□□□□ -0.41
BEST3-208ENST00000547208 ARMT1Q9H993 441 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 DCP1AQ9NPI6 582 aaPredicted RBP12.48□□□□□ -0.41
BEST3-208ENST00000547208 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 GABRQQ9UN88 632 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 A0A0G2JMZ2 1700 aa12.48□□□□□ -0.41
BEST3-208ENST00000547208 C19orf81C9J6K1 198 aa12.47□□□□□ -0.41
BEST3-208ENST00000547208 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
BEST3-208ENST00000547208 HOXA7P31268 230 aaPredicted RBP12.47□□□□□ -0.41
BEST3-208ENST00000547208 GUCY1A2P33402 732 aa12.47□□□□□ -0.41
BEST3-208ENST00000547208 UBE3CQ15386 1083 aa12.47□□□□□ -0.41
BEST3-208ENST00000547208 FAM110CQ1W6H9 321 aa12.47□□□□□ -0.41
BEST3-208ENST00000547208 EMILIN3Q9NT22 766 aa12.47□□□□□ -0.41
BEST3-208ENST00000547208 ECHDC1Q9NTX5 307 aa12.47□□□□□ -0.41
BEST3-208ENST00000547208 COL11A1P12107 1806 aaPredicted RBP12.46□□□□□ -0.41
BEST3-208ENST00000547208 PRKAB2O43741 272 aa12.46□□□□□ -0.41
BEST3-208ENST00000547208 MBD4O95243 580 aa12.46□□□□□ -0.41
BEST3-208ENST00000547208 CYP2D6P10635 497 aa12.46□□□□□ -0.41
BEST3-208ENST00000547208 HOXD10P28358 340 aa12.46□□□□□ -0.41
BEST3-208ENST00000547208 GCLCP48506 637 aaPredicted RBP12.46□□□□□ -0.41
BEST3-208ENST00000547208 PABPC4Q13310 644 aaKnown RBP eCLIP12.46□□□□□ -0.41
BEST3-208ENST00000547208 CERKLQ49MI3 558 aaPredicted RBP12.46□□□□□ -0.41
BEST3-208ENST00000547208 TSHZ3Q63HK5 1081 aa12.46□□□□□ -0.41
BEST3-208ENST00000547208 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
BEST3-208ENST00000547208 C12orf42Q96LP6 360 aa12.46□□□□□ -0.41
BEST3-208ENST00000547208 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.46□□□□□ -0.41
BEST3-208ENST00000547208 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.41
BEST3-208ENST00000547208 MYH4Q9Y623 1939 aa12.45□□□□□ -0.42
BEST3-208ENST00000547208 SMIM22K7EJ46 135 aa12.45□□□□□ -0.42
BEST3-208ENST00000547208 POLR3DP05423 398 aaPredicted RBP12.45□□□□□ -0.42
BEST3-208ENST00000547208 GRK4P32298 578 aa12.45□□□□□ -0.42
BEST3-208ENST00000547208 MTFR1Q15390 333 aa12.45□□□□□ -0.42
BEST3-208ENST00000547208 ABCB5Q2M3G0 1257 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms