RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 TATDN1Q6P1N9 297 aa18.64■□□□□ 0.57
TRAFD1-203ENST00000547063 HSCBQ8IWL3 235 aa18.64■□□□□ 0.57
TRAFD1-203ENST00000547063 SLC44A5Q8NCS7 719 aa18.64■□□□□ 0.57
TRAFD1-203ENST00000547063 TCP11L1Q9NUJ3 509 aa18.64■□□□□ 0.57
TRAFD1-203ENST00000547063 CLEC11AQ9Y240 323 aa18.64■□□□□ 0.57
TRAFD1-203ENST00000547063 POLR2AP24928 1970 aaKnown RBP18.64■□□□□ 0.57
TRAFD1-203ENST00000547063 CPA1P15085 419 aa18.63■□□□□ 0.57
TRAFD1-203ENST00000547063 SHMT1P34896 483 aa18.63■□□□□ 0.57
TRAFD1-203ENST00000547063 CERKLQ49MI3 558 aaPredicted RBP18.63■□□□□ 0.57
TRAFD1-203ENST00000547063 CYB5R4Q7L1T6 521 aa18.63■□□□□ 0.57
TRAFD1-203ENST00000547063 CDC37L1Q7L3B6 337 aa18.63■□□□□ 0.57
TRAFD1-203ENST00000547063 NEDD1Q8NHV4 660 aa18.63■□□□□ 0.57
TRAFD1-203ENST00000547063 IFIT3O14879 490 aaKnown RBP18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 NF2P35240 595 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 AK2P54819 239 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 ANTXR2P58335 489 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 TMEM67Q5HYA8 995 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 Q6ZUG5 572 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 LDHDQ86WU2 507 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 ZSCAN10Q96SZ4 725 aaPredicted RBP18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 AGXT2Q9BYV1 514 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 DNAJC18Q9H819 358 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 CABP5Q9NP86 173 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 ANGEL1Q9UNK9 670 aaKnown RBP18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 PLIN4Q96Q06 1357 aa18.62■□□□□ 0.57
TRAFD1-203ENST00000547063 LIFRP42702 1097 aa18.61■□□□□ 0.57
TRAFD1-203ENST00000547063 FAM47AQ5JRC9 791 aa18.61■□□□□ 0.57
TRAFD1-203ENST00000547063 CHST3Q7LGC8 479 aa18.61■□□□□ 0.57
TRAFD1-203ENST00000547063 ZSCAN31Q96LW9 406 aaPredicted RBP18.61■□□□□ 0.57
TRAFD1-203ENST00000547063 TCEANC2Q96MN5 208 aa18.61■□□□□ 0.57
TRAFD1-203ENST00000547063 GINM1Q9NU53 330 aa18.61■□□□□ 0.57
TRAFD1-203ENST00000547063 LIMCH1Q9UPQ0 1083 aa18.61■□□□□ 0.57
TRAFD1-203ENST00000547063 TNKSO95271 1327 aa18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 WTAPQ15007 396 aa18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 NBPF12Q5TAG4 269 aaPredicted RBP18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 DGKHQ86XP1 1220 aa18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 IGDCC4Q8TDY8 1250 aa18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 BRF1Q92994 677 aa18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 CHMP4CQ96CF2 233 aa18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 ZNF341Q9BYN7 854 aa18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 DAXXQ9UER7 740 aaPredicted RBP18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 SCAF8Q9UPN6 1271 aaKnown RBP18.6■□□□□ 0.57
TRAFD1-203ENST00000547063 MPHOSPH10O00566 681 aaKnown RBP18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 SH2B2O14492 632 aaPredicted RBP18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 TOB2Q14106 344 aaPredicted RBP18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 ABCB5Q2M3G0 1257 aa18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 TMEM179Q6ZVK1 233 aa18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 MIGA2Q7L4E1 593 aa18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 USP48Q86UV5 1035 aa18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 SGMS1Q86VZ5 419 aa18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 NMRK2Q9NPI5 230 aa18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 SH2B1Q9NRF2 756 aaPredicted RBP18.59■□□□□ 0.57
TRAFD1-203ENST00000547063 CCDC69A6NI79 296 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 FAM196BA6NMK8 535 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 ADM5C9JUS6 153 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 K7ELQ4 463 aaPredicted RBP18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 PPP1R12BO60237 982 aaPredicted RBP18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 AKR1B1P15121 316 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 EVCP57679 992 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 COL9A3Q14050 684 aaPredicted RBP18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 IFIT1BQ5T764 474 aaKnown RBP18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 SYNE3Q6ZMZ3 975 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 NFXL1Q6ZNB6 911 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 CDAN1Q8IWY9 1227 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 ANKS1AQ92625 1134 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 ZKSCAN3Q9BRR0 538 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 LRRC2Q9BYS8 371 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 KANSL2Q9H9L4 492 aa18.58■□□□□ 0.56
TRAFD1-203ENST00000547063 CTNND1O60716 968 aaKnown RBP18.57■□□□□ 0.56
TRAFD1-203ENST00000547063 CAP2P40123 477 aa18.57■□□□□ 0.56
TRAFD1-203ENST00000547063 SEC23AQ15436 765 aa18.57■□□□□ 0.56
TRAFD1-203ENST00000547063 ENAHQ8N8S7 591 aaPredicted RBP18.57■□□□□ 0.56
TRAFD1-203ENST00000547063 ZNF274Q96GC6 653 aaPredicted RBP18.57■□□□□ 0.56
TRAFD1-203ENST00000547063 LY9Q9HBG7 655 aa18.57■□□□□ 0.56
TRAFD1-203ENST00000547063 GPBP1L1Q9HC44 474 aaPredicted RBP18.57■□□□□ 0.56
TRAFD1-203ENST00000547063 UTRNP46939 3433 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 ASNSP08243 561 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 RCAN1P53805 252 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 CDCA5Q96FF9 252 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 TBC1D2Q9BYX2 928 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 GLIS2Q9BZE0 524 aaPredicted RBP18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 KAT14Q9H8E8 782 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 IL17RBQ9NRM6 502 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 MTMR4Q9NYA4 1195 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 ZNF112Q9UJU3 913 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 SLC12A7Q9Y666 1083 aa18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 GREB1LQ9C091 1923 aaPredicted RBP18.56■□□□□ 0.56
TRAFD1-203ENST00000547063 IGKV6D-41A0A0C4DH26 115 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 PHF20L1A8MW92 1017 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 CD2BP2O95400 341 aaKnown RBP18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 TTLL1O95922 423 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 CALM1P0DP23 149 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 CALM2P0DP24 149 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 CALM3P0DP25 149 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 IREB2P48200 963 aaKnown RBP18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 APOBRQ0VD83 1088 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 PRAMEF18Q5VWM3 479 aa18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 NOL8Q76FK4 1167 aaKnown RBP18.55■□□□□ 0.56
TRAFD1-203ENST00000547063 CATIPQ7Z7H3 387 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms