RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SGMS1Q86VZ5 419 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 NOSTRINQ8IVI9 506 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 FMR1NBQ8N0W7 255 aaPredicted RBP14.65□□□□□ -0.06
SCAF11-209ENST00000547018 ZNF444Q8N0Y2 327 aaPredicted RBP14.65□□□□□ -0.06
SCAF11-209ENST00000547018 GRAPLQ8TC17 118 aaPredicted RBP14.65□□□□□ -0.06
SCAF11-209ENST00000547018 NWD2Q9ULI1 1742 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 MYH2Q9UKX2 1941 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 CCDC196A0A1B0GTZ2 297 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 NLRP5P59047 1200 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 EARS2Q5JPH6 523 aaKnown RBP14.65□□□□□ -0.06
SCAF11-209ENST00000547018 RASSF8Q8NHQ8 419 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 ANO10Q9NW15 660 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 TRMT1Q9NXH9 659 aaKnown RBP14.65□□□□□ -0.06
SCAF11-209ENST00000547018 PNPLA7Q6ZV29 1317 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 FMNL1O95466 1100 aaPredicted RBP14.65□□□□□ -0.06
SCAF11-209ENST00000547018 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 IFNAR1P17181 557 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 RBM5P52756 815 aaKnown RBP eCLIP14.65□□□□□ -0.06
SCAF11-209ENST00000547018 PDE4BQ07343 736 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 LONRF3Q496Y0 759 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 SHC4Q6S5L8 630 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 NBPF11Q86T75 865 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 GGA1Q9UJY5 639 aa14.65□□□□□ -0.06
SCAF11-209ENST00000547018 CACNB3P54284 484 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 SLC39A14Q15043 492 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 SLC10A5Q5PT55 438 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 RC3H1Q5TC82 1133 aaKnown RBP14.64□□□□□ -0.07
SCAF11-209ENST00000547018 ZNF804AQ7Z570 1209 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 STAG2Q8N3U4 1231 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 MCM7P33993 719 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 PIK3AP1Q6ZUJ8 805 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 TEX11Q8IYF3 940 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 ENGASEQ8NFI3 743 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 DHX58Q96C10 678 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 C16orf45Q96MC5 204 aaPredicted RBP14.64□□□□□ -0.07
SCAF11-209ENST00000547018 KAT14Q9H8E8 782 aa14.64□□□□□ -0.07
SCAF11-209ENST00000547018 GOLGA6L6A8MZA4 724 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 DEXIO95424 95 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 BTDP43251 543 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 NOLC1Q14978 699 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCAF11-209ENST00000547018 TXNRD1Q16881 649 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 POLR3EQ9NVU0 708 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 ADAMTS3O15072 1205 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 DDR1Q08345 913 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 AXDND1Q5T1B0 1012 aaPredicted RBP14.63□□□□□ -0.07
SCAF11-209ENST00000547018 KIAA1468Q9P260 1216 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 KCNH3Q9ULD8 1083 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 WNT7AO00755 349 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 MMP1P03956 469 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 GOLGA8FQ08AF8 430 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 GOLGA8DPQ0D2H9 430 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 CCDC144BQ3MJ40 725 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 AMOTL1Q8IY63 956 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 TRMT44Q8IYL2 757 aaKnown RBP14.63□□□□□ -0.07
SCAF11-209ENST00000547018 JMYQ8N9B5 988 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 KCNF1Q9H3M0 494 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 POLLQ9UGP5 575 aa14.63□□□□□ -0.07
SCAF11-209ENST00000547018 VWA3AA6NCI4 1184 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 FAM196BA6NMK8 535 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 YEATS4O95619 227 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 TOB1P50616 345 aaPredicted RBP14.62□□□□□ -0.07
SCAF11-209ENST00000547018 ZNF75DP51815 510 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 TCP10Q12799 353 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 HEATR3Q7Z4Q2 680 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 TMTC2Q8N394 836 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 EPSTI1Q96J88 318 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 CD209Q9NNX6 404 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 XDHP47989 1333 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 ATP1A3P13637 1013 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 SRBD1Q8N5C6 995 aaKnown RBP14.62□□□□□ -0.07
SCAF11-209ENST00000547018 WASF1Q92558 559 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 DBNDD1Q9H9R9 158 aa14.62□□□□□ -0.07
SCAF11-209ENST00000547018 XBP1P17861 261 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 STX17P56962 302 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 DHX8Q14562 1220 aaKnown RBP14.61□□□□□ -0.07
SCAF11-209ENST00000547018 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.61□□□□□ -0.07
SCAF11-209ENST00000547018 KCNQ5Q9NR82 932 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 IFNKQ9P0W0 207 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 SERTAD1Q9UHV2 236 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 MPHOSPH10O00566 681 aaKnown RBP14.61□□□□□ -0.07
SCAF11-209ENST00000547018 BAG3O95817 575 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 MYH7P12883 1935 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 SEC23AQ15436 765 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 KRI1Q8N9T8 703 aaKnown RBP14.61□□□□□ -0.07
SCAF11-209ENST00000547018 PNMA1Q8ND90 353 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 UBA5Q9GZZ9 404 aa14.61□□□□□ -0.07
SCAF11-209ENST00000547018 UQCRHLA0A096LP55 91 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 A0A0U1RQG5 324 aaPredicted RBP14.6□□□□□ -0.07
SCAF11-209ENST00000547018 CTAGE5O15320 804 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 OFD1O75665 1012 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 UQCRHP07919 91 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 SPTY2D1Q68D10 685 aaPredicted RBP14.6□□□□□ -0.07
SCAF11-209ENST00000547018 WDR66Q8TBY9 1149 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 ZC3H12CQ9C0D7 883 aaKnown RBP14.6□□□□□ -0.07
SCAF11-209ENST00000547018 SERPINC1P01008 464 aa14.6□□□□□ -0.07
SCAF11-209ENST00000547018 CDK11BP21127 795 aaKnown RBP14.6□□□□□ -0.07
SCAF11-209ENST00000547018 ZSCAN29Q8IWY8 852 aaPredicted RBP14.6□□□□□ -0.07
SCAF11-209ENST00000547018 SMYD4Q8IYR2 804 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms