RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 LDHAL6AQ6ZMR3 332 aa10.23□□□□□ -0.77
VPS29-203ENST00000546588 ZNF594Q96JF6 807 aaPredicted RBP10.23□□□□□ -0.77
VPS29-203ENST00000546588 NLRP3Q96P20 1036 aa10.23□□□□□ -0.77
VPS29-203ENST00000546588 OCSTAMPQ9BR26 566 aa10.23□□□□□ -0.77
VPS29-203ENST00000546588 TLR7Q9NYK1 1049 aaKnown RBP10.23□□□□□ -0.77
VPS29-203ENST00000546588 TFCP2L1Q9NZI6 479 aa10.23□□□□□ -0.77
VPS29-203ENST00000546588 GNEQ9Y223 722 aaKnown RBP10.23□□□□□ -0.77
VPS29-203ENST00000546588 ZNF804BA4D1E1 1349 aa10.23□□□□□ -0.77
VPS29-203ENST00000546588 IRS2Q9Y4H2 1338 aa10.23□□□□□ -0.77
VPS29-203ENST00000546588 SLX4Q8IY92 1834 aa10.22□□□□□ -0.77
VPS29-203ENST00000546588 CDK5RAP2Q96SN8 1893 aa10.22□□□□□ -0.77
VPS29-203ENST00000546588 MAGEB6P1A0A0J9YX57 407 aa10.22□□□□□ -0.77
VPS29-203ENST00000546588 A0A1B0GUL7 405 aa10.22□□□□□ -0.77
VPS29-203ENST00000546588 SERPINB2P05120 415 aa10.22□□□□□ -0.77
VPS29-203ENST00000546588 ARID4AP29374 1257 aaPredicted RBP10.22□□□□□ -0.77
VPS29-203ENST00000546588 MCCD1P59942 119 aaPredicted RBP10.22□□□□□ -0.77
VPS29-203ENST00000546588 TBC1D32Q96NH3 1257 aa10.22□□□□□ -0.77
VPS29-203ENST00000546588 HAUS7Q99871 368 aa10.22□□□□□ -0.77
VPS29-203ENST00000546588 CHMP3Q9Y3E7 222 aa10.22□□□□□ -0.77
VPS29-203ENST00000546588 PDS5AQ29RF7 1337 aaKnown RBP10.22□□□□□ -0.77
VPS29-203ENST00000546588 RAD50Q92878 1312 aa10.22□□□□□ -0.77
VPS29-203ENST00000546588 VSIG8P0DPA2 414 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 IGHMBP2P38935 993 aaKnown RBP10.21□□□□□ -0.77
VPS29-203ENST00000546588 PUM3Q15397 648 aaKnown RBP10.21□□□□□ -0.77
VPS29-203ENST00000546588 C15orf52Q6ZUT6 534 aaKnown RBP10.21□□□□□ -0.77
VPS29-203ENST00000546588 TMC4Q7Z404 712 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 ANKMY2Q8IV38 441 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 CNTROBQ8N137 903 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 OGFOD1Q8N543 542 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 EVI5LQ96CN4 794 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 CDK15Q96Q40 435 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 BRIP1Q9BX63 1249 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 SEC31BQ9NQW1 1179 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 STK32BQ9NY57 414 aa10.21□□□□□ -0.77
VPS29-203ENST00000546588 FER1L6Q2WGJ9 1857 aa10.21□□□□□ -0.78
VPS29-203ENST00000546588 LAMB1P07942 1786 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 CHMLP26374 656 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 ST5P78524 1137 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 DPYDQ12882 1025 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 SF3B2Q13435 895 aaKnown RBP10.2□□□□□ -0.78
VPS29-203ENST00000546588 GRAPQ13588 217 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 UBE4AQ14139 1066 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 AGERQ15109 404 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 ATP2B3Q16720 1220 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 PHLDB3Q6NSJ2 640 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 ANKRD18AQ8IVF6 992 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 PHTF2Q8N3S3 785 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 GRAPLQ8TC17 118 aaPredicted RBP10.2□□□□□ -0.78
VPS29-203ENST00000546588 LPIN2Q92539 896 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 CRAMP1Q96RY5 1269 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 DBNDD2Q9BQY9 259 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 MED23Q9ULK4 1368 aa10.2□□□□□ -0.78
VPS29-203ENST00000546588 DDX60LQ5H9U9 1706 aaKnown RBP10.19□□□□□ -0.78
VPS29-203ENST00000546588 HIP1O00291 1037 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 ADH1CP00326 375 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 RPS8P62241 208 aaKnown RBP10.19□□□□□ -0.78
VPS29-203ENST00000546588 CHRNDQ07001 517 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 OXLD1Q5BKU9 147 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 METTL24Q5JXM2 366 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 TSHZ3Q63HK5 1081 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 CASC1Q6TDU7 716 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 BICDL1Q6ZP65 573 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 CELF1Q92879 486 aaKnown RBP10.19□□□□□ -0.78
VPS29-203ENST00000546588 XAGE2Q96GT9 111 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 MPHOSPH8Q99549 860 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 CCDC8Q9H0W5 538 aaPredicted RBP10.19□□□□□ -0.78
VPS29-203ENST00000546588 CNNM1Q9NRU3 951 aa10.19□□□□□ -0.78
VPS29-203ENST00000546588 COL1A1P02452 1464 aaPredicted RBP10.18□□□□□ -0.78
VPS29-203ENST00000546588 LZTS3O60299 673 aaPredicted RBP10.18□□□□□ -0.78
VPS29-203ENST00000546588 WDR4P57081 412 aaKnown RBP10.18□□□□□ -0.78
VPS29-203ENST00000546588 TMED8Q6PL24 325 aaPredicted RBP10.18□□□□□ -0.78
VPS29-203ENST00000546588 TRIM50Q86XT4 487 aa10.18□□□□□ -0.78
VPS29-203ENST00000546588 DNAAF2Q9NVR5 837 aaKnown RBP10.18□□□□□ -0.78
VPS29-203ENST00000546588 MINPP1Q9UNW1 487 aa10.18□□□□□ -0.78
VPS29-203ENST00000546588 DOLKQ9UPQ8 538 aa10.18□□□□□ -0.78
VPS29-203ENST00000546588 NOD1Q9Y239 953 aa10.18□□□□□ -0.78
VPS29-203ENST00000546588 ECM29Q5VYK3 1845 aa10.18□□□□□ -0.78
VPS29-203ENST00000546588 TIAM2Q8IVF5 1701 aa10.18□□□□□ -0.78
VPS29-203ENST00000546588 SGSM2O43147 1006 aa10.17□□□□□ -0.78
VPS29-203ENST00000546588 REC8O95072 547 aa10.17□□□□□ -0.78
VPS29-203ENST00000546588 SRGNP10124 158 aa10.17□□□□□ -0.78
VPS29-203ENST00000546588 ATP2B4P23634 1241 aa10.17□□□□□ -0.78
VPS29-203ENST00000546588 GTF2E1P29083 439 aaPredicted RBP10.17□□□□□ -0.78
VPS29-203ENST00000546588 TIMM10P62072 90 aa10.17□□□□□ -0.78
VPS29-203ENST00000546588 DDX46Q7L014 1031 aaKnown RBP10.17□□□□□ -0.78
VPS29-203ENST00000546588 KBTBD3Q8NAB2 608 aa10.17□□□□□ -0.78
VPS29-203ENST00000546588 CCDC85AQ96PX6 553 aaPredicted RBP10.17□□□□□ -0.78
VPS29-203ENST00000546588 PURBQ96QR8 312 aaKnown RBP10.17□□□□□ -0.78
VPS29-203ENST00000546588 ESYT1Q9BSJ8 1104 aa10.17□□□□□ -0.78
VPS29-203ENST00000546588 ANKRD2Q9GZV1 360 aa10.17□□□□□ -0.78
VPS29-203ENST00000546588 FAM177BA6PVY3 158 aa10.16□□□□□ -0.78
VPS29-203ENST00000546588 BBOX1O75936 387 aa10.16□□□□□ -0.78
VPS29-203ENST00000546588 CLSTN1O94985 981 aa10.16□□□□□ -0.78
VPS29-203ENST00000546588 MMP10P09238 476 aa10.16□□□□□ -0.78
VPS29-203ENST00000546588 UQCRFS1P1P0C7P4 283 aa10.16□□□□□ -0.78
VPS29-203ENST00000546588 SLC5A1P13866 664 aa10.16□□□□□ -0.78
VPS29-203ENST00000546588 PDE6BP35913 854 aa10.16□□□□□ -0.78
VPS29-203ENST00000546588 ATP1A2P50993 1020 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms