RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 INHAP05111 366 aa22.77■■□□□ 1.24
CHERP-204ENST00000546538 RHPN1Q8TCX5 695 aa22.77■■□□□ 1.24
CHERP-204ENST00000546538 PXYLP1Q8TE99 480 aa22.77■■□□□ 1.24
CHERP-204ENST00000546538 BIN2Q9UBW5 565 aaPredicted RBP22.77■■□□□ 1.24
CHERP-204ENST00000546538 TRIOBPQ9H2D6 2365 aa22.77■■□□□ 1.24
CHERP-204ENST00000546538 H0YGN5 161 aa22.76■■□□□ 1.23
CHERP-204ENST00000546538 EVX2Q03828 476 aa22.76■■□□□ 1.23
CHERP-204ENST00000546538 U2AF1L4Q8WU68 220 aaKnown RBP22.76■■□□□ 1.23
CHERP-204ENST00000546538 GCC1Q96CN9 775 aa22.76■■□□□ 1.23
CHERP-204ENST00000546538 RIOK1Q9BRS2 568 aaKnown RBP22.76■■□□□ 1.23
CHERP-204ENST00000546538 AS3MTQ9HBK9 375 aa22.76■■□□□ 1.23
CHERP-204ENST00000546538 TXNRD2Q9NNW7 524 aa22.76■■□□□ 1.23
CHERP-204ENST00000546538 ZBTB40Q9NUA8 1239 aa22.76■■□□□ 1.23
CHERP-204ENST00000546538 GJD2Q9UKL4 321 aa22.76■■□□□ 1.23
CHERP-204ENST00000546538 GCLCP48506 637 aaPredicted RBP22.75■■□□□ 1.23
CHERP-204ENST00000546538 UBXN2AP68543 259 aa22.75■■□□□ 1.23
CHERP-204ENST00000546538 ERC1Q8IUD2 1116 aa22.75■■□□□ 1.23
CHERP-204ENST00000546538 CRACR2BQ8N4Y2 399 aaPredicted RBP22.75■■□□□ 1.23
CHERP-204ENST00000546538 P2RX7Q99572 595 aaKnown RBP22.75■■□□□ 1.23
CHERP-204ENST00000546538 MORF4L1Q9UBU8 362 aa22.75■■□□□ 1.23
CHERP-204ENST00000546538 COG6Q9Y2V7 657 aa22.75■■□□□ 1.23
CHERP-204ENST00000546538 HOXA7P31268 230 aaPredicted RBP22.74■■□□□ 1.23
CHERP-204ENST00000546538 TATDN1Q6P1N9 297 aa22.74■■□□□ 1.23
CHERP-204ENST00000546538 EMILIN3Q9NT22 766 aa22.74■■□□□ 1.23
CHERP-204ENST00000546538 COLQQ9Y215 455 aaPredicted RBP22.74■■□□□ 1.23
CHERP-204ENST00000546538 PAK6Q9NQU5 681 aaPredicted RBP22.74■■□□□ 1.23
CHERP-204ENST00000546538 LAMA3Q16787 3333 aa22.73■■□□□ 1.23
CHERP-204ENST00000546538 SGPL1O95470 568 aa22.73■■□□□ 1.23
CHERP-204ENST00000546538 GH2P01242 217 aa22.73■■□□□ 1.23
CHERP-204ENST00000546538 MAP3K12Q12852 859 aa22.73■■□□□ 1.23
CHERP-204ENST00000546538 TRIM32Q13049 653 aa22.73■■□□□ 1.23
CHERP-204ENST00000546538 PABPC4Q13310 644 aaKnown RBP eCLIP22.73■■□□□ 1.23
CHERP-204ENST00000546538 NKX2-3Q8TAU0 364 aa22.73■■□□□ 1.23
CHERP-204ENST00000546538 COA7Q96BR5 231 aa22.73■■□□□ 1.23
CHERP-204ENST00000546538 EDC3Q96F86 508 aaKnown RBP22.73■■□□□ 1.23
CHERP-204ENST00000546538 TAOK2Q9UL54 1235 aa22.73■■□□□ 1.23
CHERP-204ENST00000546538 USP17L10C9JJH3 530 aa22.72■■□□□ 1.23
CHERP-204ENST00000546538 APBB1O00213 710 aa22.72■■□□□ 1.23
CHERP-204ENST00000546538 HLA-DOAP06340 250 aa22.72■■□□□ 1.23
CHERP-204ENST00000546538 PLCD1P51178 756 aa22.72■■□□□ 1.23
CHERP-204ENST00000546538 EHD4Q9H223 541 aa22.72■■□□□ 1.23
CHERP-204ENST00000546538 GINM1Q9NU53 330 aa22.72■■□□□ 1.23
CHERP-204ENST00000546538 RBPJLQ9UBG7 517 aa22.72■■□□□ 1.23
CHERP-204ENST00000546538 NAV1Q8NEY1 1877 aa22.71■■□□□ 1.23
CHERP-204ENST00000546538 TCRBV5S4A2TA0A5A2 114 aa22.71■■□□□ 1.23
CHERP-204ENST00000546538 C19orf81C9J6K1 198 aa22.71■■□□□ 1.23
CHERP-204ENST00000546538 PDE6AP16499 860 aa22.71■■□□□ 1.23
CHERP-204ENST00000546538 SHMT1P34896 483 aa22.71■■□□□ 1.23
CHERP-204ENST00000546538 USP5P45974 858 aa22.71■■□□□ 1.23
CHERP-204ENST00000546538 HERVK_113P62684 666 aa22.71■■□□□ 1.23
CHERP-204ENST00000546538 DEFB118Q96PH6 123 aa22.71■■□□□ 1.23
CHERP-204ENST00000546538 FXR1P51114 621 aaKnown RBP eCLIP22.7■■□□□ 1.22
CHERP-204ENST00000546538 IRX3P78415 501 aaPredicted RBP22.7■■□□□ 1.22
CHERP-204ENST00000546538 SLFNL1Q499Z3 407 aa22.7■■□□□ 1.22
CHERP-204ENST00000546538 RPAP2Q8IXW5 612 aaPredicted RBP22.7■■□□□ 1.22
CHERP-204ENST00000546538 TRIM34Q9BYJ4 488 aa22.7■■□□□ 1.22
CHERP-204ENST00000546538 CRISPLD2Q9H0B8 497 aa22.7■■□□□ 1.22
CHERP-204ENST00000546538 TMOD4Q9NZQ9 345 aa22.7■■□□□ 1.22
CHERP-204ENST00000546538 SERPINB13Q9UIV8 391 aa22.7■■□□□ 1.22
CHERP-204ENST00000546538 FARP2O94887 1054 aaPredicted RBP22.69■■□□□ 1.22
CHERP-204ENST00000546538 GUCY1A2P33402 732 aa22.69■■□□□ 1.22
CHERP-204ENST00000546538 Q3C1V9 767 aa22.69■■□□□ 1.22
CHERP-204ENST00000546538 HSP90AB4PQ58FF6 505 aa22.69■■□□□ 1.22
CHERP-204ENST00000546538 C20orf194Q5TEA3 1177 aa22.69■■□□□ 1.22
CHERP-204ENST00000546538 KIF1BPQ96EK5 621 aa22.69■■□□□ 1.22
CHERP-204ENST00000546538 DDX19BQ9UMR2 479 aa22.69■■□□□ 1.22
CHERP-204ENST00000546538 CHGBP05060 677 aa22.68■■□□□ 1.22
CHERP-204ENST00000546538 GABPAQ06546 454 aa22.68■■□□□ 1.22
CHERP-204ENST00000546538 SLC9C2Q5TAH2 1124 aa22.68■■□□□ 1.22
CHERP-204ENST00000546538 CERS3Q8IU89 383 aa22.68■■□□□ 1.22
CHERP-204ENST00000546538 ACER1Q8TDN7 264 aa22.68■■□□□ 1.22
CHERP-204ENST00000546538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.68■■□□□ 1.22
CHERP-204ENST00000546538 PORCNQ9H237 461 aa22.68■■□□□ 1.22
CHERP-204ENST00000546538 PCDH10Q9P2E7 1040 aa22.68■■□□□ 1.22
CHERP-204ENST00000546538 ALPK3Q96L96 1907 aa22.68■■□□□ 1.22
CHERP-204ENST00000546538 ZNF532Q9HCE3 1301 aa22.68■■□□□ 1.22
CHERP-204ENST00000546538 GOLIM4O00461 696 aa22.67■■□□□ 1.22
CHERP-204ENST00000546538 TRIB2Q92519 343 aa22.67■■□□□ 1.22
CHERP-204ENST00000546538 C12orf42Q96LP6 360 aa22.67■■□□□ 1.22
CHERP-204ENST00000546538 MAGEB6P1A0A0J9YX57 407 aa22.66■■□□□ 1.22
CHERP-204ENST00000546538 CNMDO75829 334 aa22.66■■□□□ 1.22
CHERP-204ENST00000546538 MS4A1P11836 297 aa22.66■■□□□ 1.22
CHERP-204ENST00000546538 ZYXQ15942 572 aaKnown RBP22.66■■□□□ 1.22
CHERP-204ENST00000546538 TMED8Q6PL24 325 aaPredicted RBP22.66■■□□□ 1.22
CHERP-204ENST00000546538 USP17L2Q6R6M4 530 aa22.66■■□□□ 1.22
CHERP-204ENST00000546538 CLASRPQ8N2M8 674 aaKnown RBP22.66■■□□□ 1.22
CHERP-204ENST00000546538 LCORLQ8N3X6 602 aa22.66■■□□□ 1.22
CHERP-204ENST00000546538 DPF3Q92784 378 aa22.66■■□□□ 1.22
CHERP-204ENST00000546538 DNAJC2Q99543 621 aaKnown RBP22.66■■□□□ 1.22
CHERP-204ENST00000546538 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.66■■□□□ 1.22
CHERP-204ENST00000546538 SMIM22K7EJ46 135 aa22.65■■□□□ 1.22
CHERP-204ENST00000546538 HMGCRP04035 888 aa22.65■■□□□ 1.22
CHERP-204ENST00000546538 MNX1P50219 401 aaPredicted RBP22.65■■□□□ 1.22
CHERP-204ENST00000546538 GPRC5AQ8NFJ5 357 aa22.65■■□□□ 1.22
CHERP-204ENST00000546538 DIS3LQ8TF46 1054 aaKnown RBP22.65■■□□□ 1.22
CHERP-204ENST00000546538 SDR42E1Q8WUS8 393 aa22.65■■□□□ 1.22
CHERP-204ENST00000546538 USP6NLQ92738 828 aa22.65■■□□□ 1.22
CHERP-204ENST00000546538 RCAN3Q9UKA8 241 aa22.65■■□□□ 1.22
CHERP-204ENST00000546538 CYP2D6P10635 497 aa22.65■■□□□ 1.22
CHERP-204ENST00000546538 ERVK-9P63128 1117 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms