RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 PTPRAP18433 802 aa24.75■■□□□ 1.55
SCARB1-211ENST00000546215 STK11IPQ8N1F8 1099 aa24.75■■□□□ 1.55
SCARB1-211ENST00000546215 PICK1Q9NRD5 415 aa24.75■■□□□ 1.55
SCARB1-211ENST00000546215 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.75■■□□□ 1.55
SCARB1-211ENST00000546215 ATAD5Q96QE3 1844 aa24.74■■□□□ 1.55
SCARB1-211ENST00000546215 AOC2O75106 756 aa24.74■■□□□ 1.55
SCARB1-211ENST00000546215 ZBTB48P10074 688 aaPredicted RBP24.74■■□□□ 1.55
SCARB1-211ENST00000546215 NOGQ13253 232 aa24.74■■□□□ 1.55
SCARB1-211ENST00000546215 ZIC5Q96T25 663 aa24.74■■□□□ 1.55
SCARB1-211ENST00000546215 ASNSP08243 561 aa24.73■■□□□ 1.55
SCARB1-211ENST00000546215 CTDSPL2Q05D32 466 aa24.73■■□□□ 1.55
SCARB1-211ENST00000546215 PPATQ06203 517 aa24.73■■□□□ 1.55
SCARB1-211ENST00000546215 MKRN3Q13064 507 aaKnown RBP24.73■■□□□ 1.55
SCARB1-211ENST00000546215 OTUD5Q96G74 571 aa24.73■■□□□ 1.55
SCARB1-211ENST00000546215 GINM1Q9NU53 330 aa24.73■■□□□ 1.55
SCARB1-211ENST00000546215 MYH8P13535 1937 aa24.73■■□□□ 1.55
SCARB1-211ENST00000546215 GH2P01242 217 aa24.72■■□□□ 1.55
SCARB1-211ENST00000546215 ABCB5Q2M3G0 1257 aa24.72■■□□□ 1.55
SCARB1-211ENST00000546215 MAP4K1Q92918 833 aa24.72■■□□□ 1.55
SCARB1-211ENST00000546215 LSG1Q9H089 658 aaKnown RBP24.72■■□□□ 1.55
SCARB1-211ENST00000546215 CTNNA3Q9UI47 895 aa24.72■■□□□ 1.55
SCARB1-211ENST00000546215 ZBTB21Q9ULJ3 1066 aa24.72■■□□□ 1.55
SCARB1-211ENST00000546215 SLC3A2P08195 630 aaKnown RBP24.71■■□□□ 1.55
SCARB1-211ENST00000546215 HAND2P61296 217 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 PPIL2Q13356 520 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 KIAA1211Q6ZU35 1233 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 CCDC84Q86UT8 332 aaPredicted RBP24.71■■□□□ 1.55
SCARB1-211ENST00000546215 MKNK2Q9HBH9 465 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 TACC3Q9Y6A5 838 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 ZHX2Q9Y6X8 837 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 IRF6O14896 467 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 RASA1P20936 1047 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 MAP2K2P36507 400 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 PDE4BQ07343 736 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 CCDC17Q96LX7 622 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 NBPF3Q9H094 633 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 ZNF287Q9HBT7 754 aa24.71■■□□□ 1.55
SCARB1-211ENST00000546215 PHIPQ8WWQ0 1821 aa24.7■■□□□ 1.55
SCARB1-211ENST00000546215 ZNF213O14771 459 aa24.7■■□□□ 1.54
SCARB1-211ENST00000546215 PRDM1O75626 825 aa24.7■■□□□ 1.54
SCARB1-211ENST00000546215 FGRP09769 529 aa24.7■■□□□ 1.54
SCARB1-211ENST00000546215 AKR1B1P15121 316 aa24.7■■□□□ 1.54
SCARB1-211ENST00000546215 INCENPQ9NQS7 918 aa24.7■■□□□ 1.54
SCARB1-211ENST00000546215 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.7■■□□□ 1.541e-7■■■■□ 24.4
SCARB1-211ENST00000546215 AFG3L2Q9Y4W6 797 aa24.7■■□□□ 1.54
SCARB1-211ENST00000546215 USP17L5A8MUK1 530 aa24.69■■□□□ 1.54
SCARB1-211ENST00000546215 GUCY1A2P33402 732 aa24.69■■□□□ 1.54
SCARB1-211ENST00000546215 KIF23Q02241 960 aaPredicted RBP24.69■■□□□ 1.54
SCARB1-211ENST00000546215 CABP5Q9NP86 173 aa24.69■■□□□ 1.54
SCARB1-211ENST00000546215 ANO2Q9NQ90 1003 aa24.69■■□□□ 1.54
SCARB1-211ENST00000546215 U3KPZ7 1027 aaPredicted RBP24.69■■□□□ 1.54
SCARB1-211ENST00000546215 THSD7BQ9C0I4 1608 aa24.68■■□□□ 1.54
SCARB1-211ENST00000546215 IMMTQ16891 758 aaKnown RBP24.68■■□□□ 1.54
SCARB1-211ENST00000546215 MS4A4AQ96JQ5 239 aa24.68■■□□□ 1.54
SCARB1-211ENST00000546215 KCNH4Q9UQ05 1017 aa24.68■■□□□ 1.54
SCARB1-211ENST00000546215 LAMA4Q16363 1823 aa24.68■■□□□ 1.54
SCARB1-211ENST00000546215 MPHOSPH10O00566 681 aaKnown RBP24.67■■□□□ 1.54
SCARB1-211ENST00000546215 TBC1D10CQ8IV04 446 aa24.67■■□□□ 1.54
SCARB1-211ENST00000546215 ZNF444Q8N0Y2 327 aaPredicted RBP24.67■■□□□ 1.54
SCARB1-211ENST00000546215 TBC1D2Q9BYX2 928 aa24.67■■□□□ 1.54
SCARB1-211ENST00000546215 SEPT2Q15019 361 aa24.67■■□□□ 1.54
SCARB1-211ENST00000546215 RAB3GAP1Q15042 981 aa24.67■■□□□ 1.54
SCARB1-211ENST00000546215 AKNAD1Q5T1N1 836 aa24.67■■□□□ 1.54
SCARB1-211ENST00000546215 TMEM179Q6ZVK1 233 aa24.67■■□□□ 1.54
SCARB1-211ENST00000546215 STAG1Q8WVM7 1258 aa24.67■■□□□ 1.54
SCARB1-211ENST00000546215 WDR18Q9BV38 432 aa24.67■■□□□ 1.54
SCARB1-211ENST00000546215 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.67■■□□□ 1.54
SCARB1-211ENST00000546215 RBM8AQ9Y5S9 174 aaKnown RBP24.67■■□□□ 1.54
SCARB1-211ENST00000546215 MANSC4A6NHS7 340 aaPredicted RBP24.66■■□□□ 1.54
SCARB1-211ENST00000546215 CXCL11O14625 94 aa24.66■■□□□ 1.54
SCARB1-211ENST00000546215 ORC4O43929 436 aa24.66■■□□□ 1.54
SCARB1-211ENST00000546215 GTF2A2P52657 109 aa24.66■■□□□ 1.54
SCARB1-211ENST00000546215 ZNF280CQ8ND82 737 aa24.66■■□□□ 1.54
SCARB1-211ENST00000546215 CYP21A2P08686 494 aa24.65■■□□□ 1.54
SCARB1-211ENST00000546215 PCP11498 1178 aaKnown RBP24.65■■□□□ 1.54
SCARB1-211ENST00000546215 SPP2Q13103 211 aa24.65■■□□□ 1.54
SCARB1-211ENST00000546215 SNAPC2Q13487 334 aa24.65■■□□□ 1.54
SCARB1-211ENST00000546215 JMYQ8N9B5 988 aa24.65■■□□□ 1.54
SCARB1-211ENST00000546215 AS3MTQ9HBK9 375 aa24.65■■□□□ 1.54
SCARB1-211ENST00000546215 TESPA1A2RU30 521 aaPredicted RBP24.64■■□□□ 1.54
SCARB1-211ENST00000546215 TRIM75PA6NK02 468 aa24.64■■□□□ 1.54
SCARB1-211ENST00000546215 TM4SF4P48230 202 aa24.64■■□□□ 1.54
SCARB1-211ENST00000546215 MFSD6Q6ZSS7 791 aa24.64■■□□□ 1.54
SCARB1-211ENST00000546215 GREB1LQ9C091 1923 aaPredicted RBP24.64■■□□□ 1.53
SCARB1-211ENST00000546215 INHBEP58166 350 aa24.63■■□□□ 1.53
SCARB1-211ENST00000546215 FAM47AQ5JRC9 791 aa24.63■■□□□ 1.53
SCARB1-211ENST00000546215 REM2Q8IYK8 340 aaPredicted RBP24.63■■□□□ 1.53
SCARB1-211ENST00000546215 RNF41Q9H4P4 317 aaPredicted RBP24.63■■□□□ 1.53
SCARB1-211ENST00000546215 PTPRFP10586 1907 aa24.63■■□□□ 1.53
SCARB1-211ENST00000546215 TFAP4Q01664 338 aa24.63■■□□□ 1.53
SCARB1-211ENST00000546215 SREBF2Q12772 1141 aa24.63■■□□□ 1.53
SCARB1-211ENST00000546215 NECTIN1Q15223 517 aa24.63■■□□□ 1.53
SCARB1-211ENST00000546215 SIAH1Q8IUQ4 282 aa24.63■■□□□ 1.53
SCARB1-211ENST00000546215 IGKV6D-41A0A0C4DH26 115 aa24.62■■□□□ 1.53
SCARB1-211ENST00000546215 A0A0G2JLL6 359 aaPredicted RBP24.62■■□□□ 1.53
SCARB1-211ENST00000546215 CETPP11597 493 aa24.62■■□□□ 1.53
SCARB1-211ENST00000546215 MOGSQ13724 837 aa24.62■■□□□ 1.53
SCARB1-211ENST00000546215 PRRT2Q7Z6L0 340 aaPredicted RBP24.62■■□□□ 1.53
SCARB1-211ENST00000546215 NEDD1Q8NHV4 660 aa24.62■■□□□ 1.53
SCARB1-211ENST00000546215 NKX2-3Q8TAU0 364 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms