RNA–Protein interactions for RNA: ENST00000545964.1

MDM1-215, Transcript of Mdm1 nuclear protein, humanhuman

TSL 2

Gene MDM1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-215ENST00000545964 WDR43Q15061 677 aaKnown RBP eCLIP5.21□□□□□ -1.58
MDM1-215ENST00000545964 TBC1D10BQ4KMP7 808 aaPredicted RBP5.21□□□□□ -1.58
MDM1-215ENST00000545964 HDGFL1Q5TGJ6 251 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 RNF20Q5VTR2 975 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 DUSP27Q5VZP5 1158 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 FIGNL1Q6PIW4 674 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 CYP2U1Q7Z449 544 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 SAPCD2Q86UD0 394 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 RNF135Q8IUD6 432 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 PLBD2Q8NHP8 589 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 GRAPLQ8TC17 118 aaPredicted RBP5.21□□□□□ -1.58
MDM1-215ENST00000545964 CELF1Q92879 486 aaKnown RBP5.21□□□□□ -1.58
MDM1-215ENST00000545964 RUNDC1Q96C34 613 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 RTFDC1Q9BY42 306 aaPredicted RBP5.21□□□□□ -1.58
MDM1-215ENST00000545964 ZC3H12CQ9C0D7 883 aaKnown RBP5.21□□□□□ -1.58
MDM1-215ENST00000545964 POLLQ9UGP5 575 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 PGAP2Q9UHJ9 254 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 SIPA1L3O60292 1781 aaPredicted RBP5.21□□□□□ -1.58
MDM1-215ENST00000545964 SCN7AQ01118 1682 aa5.21□□□□□ -1.58
MDM1-215ENST00000545964 PSMD14O00487 310 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 IRS4O14654 1257 aaPredicted RBP5.2□□□□□ -1.58
MDM1-215ENST00000545964 SF3B3Q15393 1217 aaKnown RBP5.2□□□□□ -1.58
MDM1-215ENST00000545964 TMEM259Q4ZIN3 620 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 KRT26Q7Z3Y9 468 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 TMC4Q7Z404 712 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 C2orf69Q8N8R5 385 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 TRPM4Q8TD43 1214 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 DCPSQ96C86 337 aaKnown RBP5.2□□□□□ -1.58
MDM1-215ENST00000545964 CCDC85AQ96PX6 553 aaPredicted RBP5.2□□□□□ -1.58
MDM1-215ENST00000545964 ZIC5Q96T25 663 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 HYPKQ9NX55 129 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 ANKIB1Q9P2G1 1089 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 DBF4Q9UBU7 674 aaPredicted RBP5.2□□□□□ -1.58
MDM1-215ENST00000545964 DICER1Q9UPY3 1922 aaKnown RBP5.2□□□□□ -1.58
MDM1-215ENST00000545964 CACNA1SQ13698 1873 aa5.2□□□□□ -1.58
MDM1-215ENST00000545964 IBTKQ9P2D0 1353 aaPredicted RBP5.19□□□□□ -1.58
MDM1-215ENST00000545964 COL4A5P29400 1685 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 SCN4AP35499 1836 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 ADM5C9JUS6 153 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 APAF1O14727 1248 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 ECE2O60344 883 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 TRPA1O75762 1119 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 EGFRP00533 1210 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 H2AFB1P0C5Y9 115 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 H2AFB2P0C5Z0 115 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 FGFR3P22607 806 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 ZNF157P51786 506 aaPredicted RBP5.19□□□□□ -1.58
MDM1-215ENST00000545964 MLLT1Q03111 559 aaPredicted RBP5.19□□□□□ -1.58
MDM1-215ENST00000545964 DGKZQ13574 1117 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 RGMBQ6NW40 437 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 CHSY3Q70JA7 882 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 TBC1D16Q8TBP0 767 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 DPF2Q92785 391 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 EYA3Q99504 573 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 MYD88Q99836 296 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 ISCA1Q9BUE6 129 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 TRIM34Q9BYJ4 488 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 PHAXQ9H814 394 aaKnown RBP5.19□□□□□ -1.58
MDM1-215ENST00000545964 CYLDQ9NQC7 956 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 SEC31BQ9NQW1 1179 aa5.19□□□□□ -1.58
MDM1-215ENST00000545964 SNED1Q8TER0 1413 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 CA12O43570 354 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 UFL1O94874 794 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 HSP90B1P14625 803 aaKnown RBP5.18□□□□□ -1.58
MDM1-215ENST00000545964 ADH6P28332 368 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 KIF23Q02241 960 aaPredicted RBP5.18□□□□□ -1.58
MDM1-215ENST00000545964 NOGQ13253 232 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 TRIM28Q13263 835 aaKnown RBP5.18□□□□□ -1.58
MDM1-215ENST00000545964 PRSS36Q5K4E3 855 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 ZBTB38Q8NAP3 1195 aaPredicted RBP5.18□□□□□ -1.58
MDM1-215ENST00000545964 HHIPL1Q96JK4 782 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 OCSTAMPQ9BR26 566 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 MCOLN1Q9GZU1 580 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 GBA2Q9HCG7 927 aaPredicted RBP5.18□□□□□ -1.58
MDM1-215ENST00000545964 SCAF8Q9UPN6 1271 aaKnown RBP5.18□□□□□ -1.58
MDM1-215ENST00000545964 BCORQ6W2J9 1755 aa5.18□□□□□ -1.58
MDM1-215ENST00000545964 MYBBP1AQ9BQG0 1328 aaKnown RBP5.18□□□□□ -1.58
MDM1-215ENST00000545964 RIC1Q4ADV7 1423 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 WTIPA6NIX2 430 aaPredicted RBP5.17□□□□□ -1.58
MDM1-215ENST00000545964 DDX58O95786 925 aaKnown RBP5.17□□□□□ -1.58
MDM1-215ENST00000545964 VIL1P09327 827 aaKnown RBP5.17□□□□□ -1.58
MDM1-215ENST00000545964 HOXB7P09629 217 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 RPS12P25398 132 aaKnown RBP5.17□□□□□ -1.58
MDM1-215ENST00000545964 MCCD1P59942 119 aaPredicted RBP5.17□□□□□ -1.58
MDM1-215ENST00000545964 GNAI1P63096 354 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 KIF4BQ2VIQ3 1234 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 FOXD4L6Q3SYB3 417 aaPredicted RBP5.17□□□□□ -1.58
MDM1-215ENST00000545964 CCDC152Q4G0S7 254 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 PRAMEF18Q5VWM3 479 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 MCTP1Q6DN14 999 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 FOXD4L3Q6VB84 417 aaPredicted RBP5.17□□□□□ -1.58
MDM1-215ENST00000545964 C8orf58Q8NAV2 365 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 PLVAPQ9BX97 442 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 TPSG1Q9NRR2 321 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 CWC25Q9NXE8 425 aaPredicted RBP5.17□□□□□ -1.58
MDM1-215ENST00000545964 RNF186Q9NXI6 227 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 NUP98P52948 1817 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 ASTN2O75129 1339 aaPredicted RBP5.17□□□□□ -1.58
MDM1-215ENST00000545964 CDHR2Q9BYE9 1310 aa5.17□□□□□ -1.58
MDM1-215ENST00000545964 ARID1BQ8NFD5 2236 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms