RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 BACE1P56817 501 aa27.59■■■□□ 2.01
CHD4-214ENST00000545942 MTMR2Q13614 643 aa27.59■■■□□ 2.01
CHD4-214ENST00000545942 ZBTB21Q9ULJ3 1066 aa27.59■■■□□ 2.01
CHD4-214ENST00000545942 KIAA0100Q14667 2235 aaKnown RBP27.58■■■□□ 2.01
CHD4-214ENST00000545942 MKI67P46013 3256 aaKnown RBP27.58■■■□□ 2.01
CHD4-214ENST00000545942 LOC285556D6RIA3 1793 aa27.58■■■□□ 2.01
CHD4-214ENST00000545942 MAGEB6P1A0A0J9YX57 407 aa27.58■■■□□ 2.01
CHD4-214ENST00000545942 FAM110CQ1W6H9 321 aa27.58■■■□□ 2.01
CHD4-214ENST00000545942 TTC6Q86TZ1 520 aa27.58■■■□□ 2.01
CHD4-214ENST00000545942 EHD4Q9H223 541 aa27.58■■■□□ 2.01
CHD4-214ENST00000545942 TMOD4Q9NZQ9 345 aa27.58■■■□□ 2.01
CHD4-214ENST00000545942 SERPINB13Q9UIV8 391 aa27.58■■■□□ 2.01
CHD4-214ENST00000545942 C19orf81C9J6K1 198 aa27.57■■■□□ 2
CHD4-214ENST00000545942 TNPO2O14787 897 aaKnown RBP27.57■■■□□ 2
CHD4-214ENST00000545942 GCLCP48506 637 aaPredicted RBP27.57■■■□□ 2
CHD4-214ENST00000545942 SHROOM1Q2M3G4 852 aaPredicted RBP27.57■■■□□ 2
CHD4-214ENST00000545942 ASCC2Q9H1I8 757 aaPredicted RBP27.57■■■□□ 2
CHD4-214ENST00000545942 GABRQQ9UN88 632 aa27.57■■■□□ 2
CHD4-214ENST00000545942 TATDN1Q6P1N9 297 aa27.56■■■□□ 2
CHD4-214ENST00000545942 ZNF532Q9HCE3 1301 aa27.56■■■□□ 2
CHD4-214ENST00000545942 USP17L10C9JJH3 530 aa27.55■■■□□ 2
CHD4-214ENST00000545942 ATP5JP18859 108 aa27.55■■■□□ 2
CHD4-214ENST00000545942 MTFR1Q15390 333 aa27.55■■■□□ 2
CHD4-214ENST00000545942 SLAIN1Q8ND83 568 aa27.55■■■□□ 2
CHD4-214ENST00000545942 CRNKL1Q9BZJ0 848 aaKnown RBP27.55■■■□□ 2
CHD4-214ENST00000545942 LRRCC1Q9C099 1032 aa27.55■■■□□ 2
CHD4-214ENST00000545942 GH2P01242 217 aa27.54■■■□□ 2
CHD4-214ENST00000545942 FLT3LGP49771 235 aa27.54■■■□□ 2
CHD4-214ENST00000545942 EDC3Q96F86 508 aaKnown RBP27.54■■■□□ 2
CHD4-214ENST00000545942 BOLA2Q9H3K6 86 aa27.54■■■□□ 2
CHD4-214ENST00000545942 PAG1Q9NWQ8 432 aa27.54■■■□□ 2
CHD4-214ENST00000545942 BIN2Q9UBW5 565 aaPredicted RBP27.54■■■□□ 2
CHD4-214ENST00000545942 TCRBV5S4A2TA0A5A2 114 aa27.53■■■□□ 2
CHD4-214ENST00000545942 HOXA7P31268 230 aaPredicted RBP27.53■■■□□ 2
CHD4-214ENST00000545942 UBXN2AP68543 259 aa27.53■■■□□ 2
CHD4-214ENST00000545942 IRX3P78415 501 aaPredicted RBP27.53■■■□□ 2
CHD4-214ENST00000545942 COA7Q96BR5 231 aa27.53■■■□□ 2
CHD4-214ENST00000545942 POLR3DP05423 398 aaPredicted RBP27.52■■■□□ 2
CHD4-214ENST00000545942 ADCY3O60266 1144 aa27.51■■□□□ 1.99
CHD4-214ENST00000545942 PLCD1P51178 756 aa27.51■■□□□ 1.99
CHD4-214ENST00000545942 IRF5Q13568 498 aa27.51■■□□□ 1.99
CHD4-214ENST00000545942 CERKLQ49MI3 558 aaPredicted RBP27.51■■□□□ 1.99
CHD4-214ENST00000545942 HAUS7Q99871 368 aa27.51■■□□□ 1.99
CHD4-214ENST00000545942 MGAMO43451 1857 aa27.51■■□□□ 1.99
CHD4-214ENST00000545942 MYH1P12882 1939 aa27.51■■□□□ 1.99
CHD4-214ENST00000545942 NKX2-3Q8TAU0 364 aa27.5■■□□□ 1.99
CHD4-214ENST00000545942 PXYLP1Q8TE99 480 aa27.5■■□□□ 1.99
CHD4-214ENST00000545942 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.5■■□□□ 1.99
CHD4-214ENST00000545942 MCM9Q9NXL9 1143 aa27.5■■□□□ 1.99
CHD4-214ENST00000545942 CCL5P13501 91 aa27.49■■□□□ 1.99
CHD4-214ENST00000545942 LCORLQ8N3X6 602 aa27.49■■□□□ 1.99
CHD4-214ENST00000545942 EMILIN3Q9NT22 766 aa27.49■■□□□ 1.99
CHD4-214ENST00000545942 MORF4L1Q9UBU8 362 aa27.49■■□□□ 1.99
CHD4-214ENST00000545942 SMARCA5O60264 1052 aaPredicted RBP27.48■■□□□ 1.99
CHD4-214ENST00000545942 SHMT1P34896 483 aa27.48■■□□□ 1.99
CHD4-214ENST00000545942 ADD2P35612 726 aa27.48■■□□□ 1.99
CHD4-214ENST00000545942 RAB3GAP1Q15042 981 aa27.48■■□□□ 1.99
CHD4-214ENST00000545942 ABCB5Q2M3G0 1257 aa27.48■■□□□ 1.99
CHD4-214ENST00000545942 USP17L2Q6R6M4 530 aa27.48■■□□□ 1.99
CHD4-214ENST00000545942 SDR42E1Q8WUS8 393 aa27.48■■□□□ 1.99
CHD4-214ENST00000545942 P2RX7Q99572 595 aaKnown RBP27.48■■□□□ 1.99
CHD4-214ENST00000545942 RNF208Q9H0X6 261 aa27.48■■□□□ 1.99
CHD4-214ENST00000545942 CABP5Q9NP86 173 aa27.48■■□□□ 1.99
CHD4-214ENST00000545942 GJB1P08034 283 aa27.47■■□□□ 1.99
CHD4-214ENST00000545942 GABPAQ06546 454 aa27.47■■□□□ 1.99
CHD4-214ENST00000545942 FEZ1Q99689 392 aa27.47■■□□□ 1.99
CHD4-214ENST00000545942 DCP1AQ9NPI6 582 aaPredicted RBP27.47■■□□□ 1.99
CHD4-214ENST00000545942 DDX60LQ5H9U9 1706 aaKnown RBP27.47■■□□□ 1.99
CHD4-214ENST00000545942 ELNP15502 786 aa27.46■■□□□ 1.99
CHD4-214ENST00000545942 HERVK_113P62684 666 aa27.46■■□□□ 1.99
CHD4-214ENST00000545942 SHISA4Q96DD7 197 aa27.46■■□□□ 1.99
CHD4-214ENST00000545942 ARMT1Q9H993 441 aa27.46■■□□□ 1.99
CHD4-214ENST00000545942 TAOK2Q9UL54 1235 aa27.46■■□□□ 1.99
CHD4-214ENST00000545942 GJA8P48165 433 aa27.45■■□□□ 1.99
CHD4-214ENST00000545942 C12orf42Q96LP6 360 aa27.45■■□□□ 1.99
CHD4-214ENST00000545942 MBD4O95243 580 aa27.44■■□□□ 1.98
CHD4-214ENST00000545942 SLC34A2O95436 690 aa27.44■■□□□ 1.98
CHD4-214ENST00000545942 INHAP05111 366 aa27.44■■□□□ 1.98
CHD4-214ENST00000545942 USP14P54578 494 aa27.44■■□□□ 1.98
CHD4-214ENST00000545942 ZYXQ15942 572 aaKnown RBP27.44■■□□□ 1.98
CHD4-214ENST00000545942 SLFNL1Q499Z3 407 aa27.44■■□□□ 1.98
CHD4-214ENST00000545942 GPRC5AQ8NFJ5 357 aa27.44■■□□□ 1.98
CHD4-214ENST00000545942 GTF3C2Q8WUA4 911 aaPredicted RBP27.44■■□□□ 1.98
CHD4-214ENST00000545942 UNC93B1Q9H1C4 597 aa27.44■■□□□ 1.98
CHD4-214ENST00000545942 DCTPP1Q9H773 170 aa27.44■■□□□ 1.98
CHD4-214ENST00000545942 UBE3CQ15386 1083 aa27.43■■□□□ 1.98
CHD4-214ENST00000545942 KIAA1683Q9H0B3 1180 aa27.43■■□□□ 1.98
CHD4-214ENST00000545942 ATP8A2Q9NTI2 1148 aa27.43■■□□□ 1.98
CHD4-214ENST00000545942 ECHDC1Q9NTX5 307 aa27.43■■□□□ 1.98
CHD4-214ENST00000545942 NAV1Q8NEY1 1877 aa27.43■■□□□ 1.98
CHD4-214ENST00000545942 EVX2Q03828 476 aa27.42■■□□□ 1.98
CHD4-214ENST00000545942 ZSCAN25Q6NSZ9 544 aa27.42■■□□□ 1.98
CHD4-214ENST00000545942 TXNRD2Q9NNW7 524 aa27.42■■□□□ 1.98
CHD4-214ENST00000545942 GJD2Q9UKL4 321 aa27.42■■□□□ 1.98
CHD4-214ENST00000545942 PRKAB2O43741 272 aa27.41■■□□□ 1.98
CHD4-214ENST00000545942 ACER1Q8TDN7 264 aa27.41■■□□□ 1.98
CHD4-214ENST00000545942 RBPJLQ9UBG7 517 aa27.41■■□□□ 1.98
CHD4-214ENST00000545942 SWAP70Q9UH65 585 aa27.41■■□□□ 1.98
CHD4-214ENST00000545942 USP17L15C9J2P7 530 aa27.41■■□□□ 1.98
CHD4-214ENST00000545942 USP17L13C9JLJ4 530 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms