RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 UBE2Q2LH0YL09 131 aa12.23□□□□□ -0.45
LINC00939-203ENST00000545784 HLA-DOAP06340 250 aa12.23□□□□□ -0.45
LINC00939-203ENST00000545784 NF2P35240 595 aa12.23□□□□□ -0.45
LINC00939-203ENST00000545784 APLP1P51693 650 aa12.23□□□□□ -0.45
LINC00939-203ENST00000545784 DCAF15Q66K64 600 aa12.23□□□□□ -0.45
LINC00939-203ENST00000545784 MCTP1Q6DN14 999 aa12.23□□□□□ -0.45
LINC00939-203ENST00000545784 TATDN1Q6P1N9 297 aa12.23□□□□□ -0.45
LINC00939-203ENST00000545784 NBPF3Q9H094 633 aa12.23□□□□□ -0.45
LINC00939-203ENST00000545784 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00939-203ENST00000545784 ANAPC4Q9UJX5 808 aa12.23□□□□□ -0.45
LINC00939-203ENST00000545784 DDX60LQ5H9U9 1706 aaKnown RBP12.23□□□□□ -0.45
LINC00939-203ENST00000545784 TMEM88BA6NKF7 163 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 MINDY4BA8MYZ0 360 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 PPP1R12BO60237 982 aaPredicted RBP12.22□□□□□ -0.45
LINC00939-203ENST00000545784 MBD3O95983 291 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 SHMT1P34896 483 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 PPARAQ07869 468 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 ZSCAN23Q3MJ62 389 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 C2orf69Q8N8R5 385 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00939-203ENST00000545784 ZNF341Q9BYN7 854 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 LMBRD1Q9NUN5 540 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 MCM5P33992 734 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 JAG1P78504 1218 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 MAP3K9P80192 1104 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.22□□□□□ -0.45
LINC00939-203ENST00000545784 C16orf86Q6ZW13 317 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 SAPCD2Q86UD0 394 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 SLC44A5Q8NCS7 719 aa12.22□□□□□ -0.45
LINC00939-203ENST00000545784 ANGEL1Q9UNK9 670 aaKnown RBP12.22□□□□□ -0.45
LINC00939-203ENST00000545784 ROBO3Q96MS0 1386 aa12.21□□□□□ -0.45
LINC00939-203ENST00000545784 EPB41L2O43491 1005 aaKnown RBP12.21□□□□□ -0.45
LINC00939-203ENST00000545784 FGRP09769 529 aa12.21□□□□□ -0.45
LINC00939-203ENST00000545784 MCCP23508 829 aa12.21□□□□□ -0.45
LINC00939-203ENST00000545784 CDK8P49336 464 aa12.21□□□□□ -0.45
LINC00939-203ENST00000545784 KIAA1211Q6ZU35 1233 aa12.21□□□□□ -0.45
LINC00939-203ENST00000545784 ARMC9Q7Z3E5 817 aa12.21□□□□□ -0.45
LINC00939-203ENST00000545784 INCENPQ9NQS7 918 aa12.21□□□□□ -0.45
LINC00939-203ENST00000545784 CTNNA3Q9UI47 895 aa12.21□□□□□ -0.45
LINC00939-203ENST00000545784 TLL2Q9Y6L7 1015 aa12.21□□□□□ -0.45
LINC00939-203ENST00000545784 SIPA1L1O43166 1804 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 UNCXA6NJT0 531 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 OFD1O75665 1012 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 INPP5BP32019 993 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 IREB2P48200 963 aaKnown RBP12.2□□□□□ -0.46
LINC00939-203ENST00000545784 ANAPC15P60006 121 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 CTDSPL2Q05D32 466 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 NECTIN1Q15223 517 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
LINC00939-203ENST00000545784 ZKSCAN4Q969J2 545 aaPredicted RBP12.2□□□□□ -0.46
LINC00939-203ENST00000545784 PDLIM2Q96JY6 352 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 ANO2Q9NQ90 1003 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 SWAP70Q9UH65 585 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00939-203ENST00000545784 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
LINC00939-203ENST00000545784 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
LINC00939-203ENST00000545784 SHROOM1Q2M3G4 852 aaPredicted RBP12.2□□□□□ -0.46
LINC00939-203ENST00000545784 AMOTL1Q8IY63 956 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 CRACR2BQ8N4Y2 399 aaPredicted RBP12.2□□□□□ -0.46
LINC00939-203ENST00000545784 CLMNQ96JQ2 1002 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 WRNIP1Q96S55 665 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 RBM8AQ9Y5S9 174 aaKnown RBP12.2□□□□□ -0.46
LINC00939-203ENST00000545784 TAF6LQ9Y6J9 622 aa12.2□□□□□ -0.46
LINC00939-203ENST00000545784 MYH1P12882 1939 aa12.19□□□□□ -0.46
LINC00939-203ENST00000545784 BAZ2AQ9UIF9 1905 aaKnown RBP12.19□□□□□ -0.46
LINC00939-203ENST00000545784 ZNF213O14771 459 aa12.19□□□□□ -0.46
LINC00939-203ENST00000545784 CTNND1O60716 968 aaKnown RBP12.19□□□□□ -0.46
LINC00939-203ENST00000545784 CAP2P40123 477 aa12.19□□□□□ -0.46
LINC00939-203ENST00000545784 HAND2P61296 217 aa12.19□□□□□ -0.46
LINC00939-203ENST00000545784 VGLL4Q14135 290 aa12.19□□□□□ -0.46
LINC00939-203ENST00000545784 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
LINC00939-203ENST00000545784 TBC1D10CQ8IV04 446 aa12.19□□□□□ -0.46
LINC00939-203ENST00000545784 NKX2-3Q8TAU0 364 aa12.19□□□□□ -0.46
LINC00939-203ENST00000545784 INTS4Q96HW7 963 aaKnown RBP12.19□□□□□ -0.46
LINC00939-203ENST00000545784 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
LINC00939-203ENST00000545784 SNCAIPQ9Y6H5 919 aa12.19□□□□□ -0.46
LINC00939-203ENST00000545784 NAV1Q8NEY1 1877 aa12.19□□□□□ -0.46
LINC00939-203ENST00000545784 CYP21A2P08686 494 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 RASA1P20936 1047 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 HUNKP57058 714 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 CSPP1Q1MSJ5 1256 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 STK11IPQ8N1F8 1099 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
LINC00939-203ENST00000545784 PAPPA2Q9BXP8 1791 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 TRPM7Q96QT4 1865 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 ZNF500O60304 480 aaPredicted RBP12.18□□□□□ -0.46
LINC00939-203ENST00000545784 NCLP19338 710 aaKnown RBP12.18□□□□□ -0.46
LINC00939-203ENST00000545784 GUCY1A2P33402 732 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 HTRA3P83110 453 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
LINC00939-203ENST00000545784 LRSAM1Q6UWE0 723 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 STAG1Q8WVM7 1258 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 KCNB2Q92953 911 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 HHIPL1Q96JK4 782 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC00939-203ENST00000545784 TRIM34Q9BYJ4 488 aa12.18□□□□□ -0.46
LINC00939-203ENST00000545784 SLC27A2O14975 620 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms