RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 WDR18Q9BV38 432 aa25.67■■□□□ 1.7
SCARB1-210ENST00000545493 BCL11AQ9H165 835 aa25.67■■□□□ 1.7
SCARB1-210ENST00000545493 PNMA3Q9UL41 463 aa25.67■■□□□ 1.7
SCARB1-210ENST00000545493 PRPF38BQ5VTL8 546 aaKnown RBP25.66■■□□□ 1.7
SCARB1-210ENST00000545493 TMEM106CQ9BVX2 250 aa25.66■■□□□ 1.7
SCARB1-210ENST00000545493 TCRBV5S4A2TA0A5A2 114 aa25.65■■□□□ 1.7
SCARB1-210ENST00000545493 HOXD10P28358 340 aa25.65■■□□□ 1.7
SCARB1-210ENST00000545493 FAM110CQ1W6H9 321 aa25.65■■□□□ 1.7
SCARB1-210ENST00000545493 SLC9C2Q5TAH2 1124 aa25.65■■□□□ 1.7
SCARB1-210ENST00000545493 ANKRD13CQ8N6S4 541 aa25.65■■□□□ 1.7
SCARB1-210ENST00000545493 RAET1EQ8TD07 263 aa25.65■■□□□ 1.7
SCARB1-210ENST00000545493 EHD4Q9H223 541 aa25.65■■□□□ 1.7
SCARB1-210ENST00000545493 GABRQQ9UN88 632 aa25.65■■□□□ 1.7
SCARB1-210ENST00000545493 ZNF532Q9HCE3 1301 aa25.64■■□□□ 1.7
SCARB1-210ENST00000545493 BACE1P56817 501 aa25.64■■□□□ 1.7
SCARB1-210ENST00000545493 GINM1Q9NU53 330 aa25.64■■□□□ 1.7
SCARB1-210ENST00000545493 MAGEB6P1A0A0J9YX57 407 aa25.63■■□□□ 1.69
SCARB1-210ENST00000545493 GRK4P32298 578 aa25.63■■□□□ 1.69
SCARB1-210ENST00000545493 MTFR1Q15390 333 aa25.63■■□□□ 1.69
SCARB1-210ENST00000545493 TATDN1Q6P1N9 297 aa25.63■■□□□ 1.69
SCARB1-210ENST00000545493 ASCC2Q9H1I8 757 aaPredicted RBP25.63■■□□□ 1.69
SCARB1-210ENST00000545493 BOLA2Q9H3K6 86 aa25.63■■□□□ 1.69
SCARB1-210ENST00000545493 SERPINB13Q9UIV8 391 aa25.63■■□□□ 1.69
SCARB1-210ENST00000545493 EVX2Q03828 476 aa25.62■■□□□ 1.69
SCARB1-210ENST00000545493 PABPC4Q13310 644 aaKnown RBP eCLIP25.62■■□□□ 1.69
SCARB1-210ENST00000545493 LCORLQ8N3X6 602 aa25.62■■□□□ 1.69
SCARB1-210ENST00000545493 PAG1Q9NWQ8 432 aa25.62■■□□□ 1.69
SCARB1-210ENST00000545493 TNPO2O14787 897 aaKnown RBP25.61■■□□□ 1.69
SCARB1-210ENST00000545493 SMARCA5O60264 1052 aaPredicted RBP25.61■■□□□ 1.69
SCARB1-210ENST00000545493 GH2P01242 217 aa25.61■■□□□ 1.69
SCARB1-210ENST00000545493 ATP5JP18859 108 aa25.61■■□□□ 1.69
SCARB1-210ENST00000545493 PLCD1P51178 756 aa25.61■■□□□ 1.69
SCARB1-210ENST00000545493 SHISA4Q96DD7 197 aa25.61■■□□□ 1.69
SCARB1-210ENST00000545493 LRRCC1Q9C099 1032 aa25.61■■□□□ 1.69
SCARB1-210ENST00000545493 DOCK3Q8IZD9 2030 aa25.6■■□□□ 1.69
SCARB1-210ENST00000545493 SHMT1P34896 483 aa25.6■■□□□ 1.69
SCARB1-210ENST00000545493 SLFNL1Q499Z3 407 aa25.6■■□□□ 1.69
SCARB1-210ENST00000545493 HAUS7Q99871 368 aa25.6■■□□□ 1.69
SCARB1-210ENST00000545493 PLXNB2O15031 1838 aa25.6■■□□□ 1.69
SCARB1-210ENST00000545493 USP17L10C9JJH3 530 aa25.59■■□□□ 1.69
SCARB1-210ENST00000545493 CHGBP05060 677 aa25.59■■□□□ 1.69
SCARB1-210ENST00000545493 ADD2P35612 726 aa25.59■■□□□ 1.69
SCARB1-210ENST00000545493 GCLCP48506 637 aaPredicted RBP25.59■■□□□ 1.69
SCARB1-210ENST00000545493 FLT3LGP49771 235 aa25.59■■□□□ 1.69
SCARB1-210ENST00000545493 TTC6Q86TZ1 520 aa25.59■■□□□ 1.69
SCARB1-210ENST00000545493 SLAIN1Q8ND83 568 aa25.59■■□□□ 1.69
SCARB1-210ENST00000545493 SDR42E1Q8WUS8 393 aa25.59■■□□□ 1.69
SCARB1-210ENST00000545493 CRNKL1Q9BZJ0 848 aaKnown RBP25.59■■□□□ 1.69
SCARB1-210ENST00000545493 TMOD4Q9NZQ9 345 aa25.59■■□□□ 1.69
SCARB1-210ENST00000545493 GABPAQ06546 454 aa25.58■■□□□ 1.69
SCARB1-210ENST00000545493 BAZ2AQ9UIF9 1905 aaKnown RBP25.58■■□□□ 1.69
SCARB1-210ENST00000545493 MYH8P13535 1937 aa25.57■■□□□ 1.68
SCARB1-210ENST00000545493 C19orf81C9J6K1 198 aa25.57■■□□□ 1.68
SCARB1-210ENST00000545493 HOXA7P31268 230 aaPredicted RBP25.57■■□□□ 1.68
SCARB1-210ENST00000545493 IRX3P78415 501 aaPredicted RBP25.57■■□□□ 1.68
SCARB1-210ENST00000545493 ARMT1Q9H993 441 aa25.57■■□□□ 1.68
SCARB1-210ENST00000545493 DCP1AQ9NPI6 582 aaPredicted RBP25.57■■□□□ 1.68
SCARB1-210ENST00000545493 EMILIN3Q9NT22 766 aa25.57■■□□□ 1.68
SCARB1-210ENST00000545493 IRF5Q13568 498 aa25.56■■□□□ 1.68
SCARB1-210ENST00000545493 MORF4L1Q9UBU8 362 aa25.56■■□□□ 1.68
SCARB1-210ENST00000545493 ADCY3O60266 1144 aa25.55■■□□□ 1.68
SCARB1-210ENST00000545493 PEX10O60683 326 aa25.55■■□□□ 1.68
SCARB1-210ENST00000545493 MBD4O95243 580 aa25.55■■□□□ 1.68
SCARB1-210ENST00000545493 POLR3DP05423 398 aaPredicted RBP25.55■■□□□ 1.68
SCARB1-210ENST00000545493 CCL5P13501 91 aa25.55■■□□□ 1.68
SCARB1-210ENST00000545493 ELNP15502 786 aa25.55■■□□□ 1.68
SCARB1-210ENST00000545493 CERKLQ49MI3 558 aaPredicted RBP25.55■■□□□ 1.68
SCARB1-210ENST00000545493 C12orf42Q96LP6 360 aa25.55■■□□□ 1.68
SCARB1-210ENST00000545493 MCM9Q9NXL9 1143 aa25.55■■□□□ 1.68
SCARB1-210ENST00000545493 CYP2D6P10635 497 aa25.54■■□□□ 1.68
SCARB1-210ENST00000545493 GUCY1A2P33402 732 aa25.54■■□□□ 1.68
SCARB1-210ENST00000545493 HERVK_113P62684 666 aa25.54■■□□□ 1.68
SCARB1-210ENST00000545493 UBXN2AP68543 259 aa25.54■■□□□ 1.68
SCARB1-210ENST00000545493 RAB3GAP1Q15042 981 aa25.54■■□□□ 1.68
SCARB1-210ENST00000545493 ABCB5Q2M3G0 1257 aa25.54■■□□□ 1.68
SCARB1-210ENST00000545493 P2RX7Q99572 595 aaKnown RBP25.54■■□□□ 1.68
SCARB1-210ENST00000545493 TXNRD2Q9NNW7 524 aa25.54■■□□□ 1.68
SCARB1-210ENST00000545493 PRKAB2O43741 272 aa25.53■■□□□ 1.68
SCARB1-210ENST00000545493 INHAP05111 366 aa25.53■■□□□ 1.68
SCARB1-210ENST00000545493 ZYXQ15942 572 aaKnown RBP25.53■■□□□ 1.68
SCARB1-210ENST00000545493 USP17L2Q6R6M4 530 aa25.53■■□□□ 1.68
SCARB1-210ENST00000545493 PXYLP1Q8TE99 480 aa25.53■■□□□ 1.68
SCARB1-210ENST00000545493 COA7Q96BR5 231 aa25.53■■□□□ 1.68
SCARB1-210ENST00000545493 UNC93B1Q9H1C4 597 aa25.53■■□□□ 1.68
SCARB1-210ENST00000545493 DCTPP1Q9H773 170 aa25.53■■□□□ 1.68
SCARB1-210ENST00000545493 POTEEQ6S8J3 1075 aa25.52■■□□□ 1.68
SCARB1-210ENST00000545493 SLC44A5Q8NCS7 719 aa25.52■■□□□ 1.68
SCARB1-210ENST00000545493 ACER1Q8TDN7 264 aa25.52■■□□□ 1.68
SCARB1-210ENST00000545493 FEZ1Q99689 392 aa25.52■■□□□ 1.68
SCARB1-210ENST00000545493 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.52■■□□□ 1.685e-8■■■■■ 28.3
SCARB1-210ENST00000545493 BIN2Q9UBW5 565 aaPredicted RBP25.52■■□□□ 1.68
SCARB1-210ENST00000545493 SLC34A2O95436 690 aa25.51■■□□□ 1.67
SCARB1-210ENST00000545493 UBE3CQ15386 1083 aa25.51■■□□□ 1.67
SCARB1-210ENST00000545493 TSHZ3Q63HK5 1081 aa25.51■■□□□ 1.67
SCARB1-210ENST00000545493 RNF208Q9H0X6 261 aa25.51■■□□□ 1.67
SCARB1-210ENST00000545493 ECHDC1Q9NTX5 307 aa25.51■■□□□ 1.67
SCARB1-210ENST00000545493 TAOK2Q9UL54 1235 aa25.51■■□□□ 1.67
SCARB1-210ENST00000545493 A0A0G2JMZ2 1700 aa25.5■■□□□ 1.67
SCARB1-210ENST00000545493 GJB1P08034 283 aa25.5■■□□□ 1.67
SCARB1-210ENST00000545493 GJA8P48165 433 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms