RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 ABCF2Q9UG63 623 aa8.29□□□□□ -1.08
SPPL3-209ENST00000545209 LEMD3Q9Y2U8 911 aa8.29□□□□□ -1.08
SPPL3-209ENST00000545209 ZDHHC9Q9Y397 364 aa8.29□□□□□ -1.08
SPPL3-209ENST00000545209 A0A1B0GUL6 1792 aa8.29□□□□□ -1.08
SPPL3-209ENST00000545209 CASZ1Q86V15 1759 aa8.29□□□□□ -1.08
SPPL3-209ENST00000545209 DOCK2Q92608 1830 aa8.29□□□□□ -1.08
SPPL3-209ENST00000545209 XDHP47989 1333 aa8.29□□□□□ -1.08
SPPL3-209ENST00000545209 PNPLA7Q6ZV29 1317 aa8.29□□□□□ -1.08
SPPL3-209ENST00000545209 WDR19Q8NEZ3 1342 aa8.29□□□□□ -1.08
SPPL3-209ENST00000545209 TNRC6CQ9HCJ0 1690 aaKnown RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 PATL2C9JE40 543 aaKnown RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 FOXP2O15409 715 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 STX6O43752 255 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 ZSCAN22P10073 491 aaPredicted RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 CYP7A1P22680 504 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 GJB2P29033 226 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 TDO2P48775 406 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 WNT7BP56706 349 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 HAND2P61296 217 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 EXOSC10Q01780 885 aaKnown RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 CRY2Q49AN0 593 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 FOXD4L5Q5VV16 416 aaPredicted RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 SPTY2D1Q68D10 685 aaPredicted RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 TMC4Q7Z404 712 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 ZNF804AQ7Z570 1209 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 FBXL16Q8N461 479 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 NECAB1Q8N987 351 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 FOXD4L4Q8WXT5 416 aaPredicted RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 BRF1Q92994 677 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 GTF3C6Q969F1 213 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 FAM84BQ96KN1 310 aaPredicted RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 LLPHQ9BRT6 129 aaKnown RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 UNC93B1Q9H1C4 597 aa8.28□□□□□ -1.08
SPPL3-209ENST00000545209 IQSEC3Q9UPP2 1182 aaPredicted RBP8.28□□□□□ -1.08
SPPL3-209ENST00000545209 COL4A1P02462 1669 aa8.27□□□□□ -1.08
SPPL3-209ENST00000545209 MAGEB6P1A0A0J9YX57 407 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 POLRMTO00411 1230 aaKnown RBP8.27□□□□□ -1.09
SPPL3-209ENST00000545209 WNT7AO00755 349 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 PRC1O43663 620 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 DHX16O60231 1041 aaKnown RBP8.27□□□□□ -1.09
SPPL3-209ENST00000545209 PFKFB2O60825 505 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 BBOX1O75936 387 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 F12P00748 615 aaPredicted RBP8.27□□□□□ -1.09
SPPL3-209ENST00000545209 NCLP19338 710 aaKnown RBP8.27□□□□□ -1.09
SPPL3-209ENST00000545209 SYT1P21579 422 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 HMGN5P82970 282 aaKnown RBP8.27□□□□□ -1.09
SPPL3-209ENST00000545209 SKOR1P84550 965 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 CTDSPL2Q05D32 466 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 DDR1Q08345 913 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 STK3Q13188 491 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 NAA16Q6N069 864 aaPredicted RBP8.27□□□□□ -1.09
SPPL3-209ENST00000545209 CRAMP1Q96RY5 1269 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 AGXT2Q9BYV1 514 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 CNNM2Q9H8M5 875 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 ARMT1Q9H993 441 aa8.27□□□□□ -1.09
SPPL3-209ENST00000545209 NAP1L2Q9ULW6 460 aaPredicted RBP8.27□□□□□ -1.09
SPPL3-209ENST00000545209 DDX49Q9Y6V7 483 aaKnown RBP8.27□□□□□ -1.09
SPPL3-209ENST00000545209 VPS37CA5D8V6 355 aaPredicted RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 MBD3O95983 291 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 HOXA10P31260 410 aaPredicted RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 CHAF1AQ13111 956 aaPredicted RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 ZNF827Q17R98 1081 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 KLHL40Q2TBA0 621 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 LARP1BQ659C4 914 aaKnown RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 C15orf52Q6ZUT6 534 aaKnown RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 MB21D2Q8IYB1 491 aaPredicted RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 IFNL3Q8IZI9 196 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 FAM184AQ8NB25 1140 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 WDR66Q8TBY9 1149 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 ZNF274Q96GC6 653 aaPredicted RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 LRRC2Q9BYS8 371 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 KRT23Q9C075 422 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 TMX4Q9H1E5 349 aaPredicted RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 RNF41Q9H4P4 317 aaPredicted RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 MAP10Q9P2G4 905 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 GGA1Q9UJY5 639 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 SLC4A4Q9Y6R1 1079 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 TAF1P21675 1872 aa8.26□□□□□ -1.09
SPPL3-209ENST00000545209 COL1A1P02452 1464 aaPredicted RBP8.26□□□□□ -1.09
SPPL3-209ENST00000545209 LAMA4Q16363 1823 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 A0A0G2JLW4 131 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 KLRG2A4D1S0 409 aaPredicted RBP8.25□□□□□ -1.09
SPPL3-209ENST00000545209 GOLGA8BA8MQT2 603 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 GSG1L2A8MUP6 293 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 PRPF40AO75400 957 aaKnown RBP8.25□□□□□ -1.09
SPPL3-209ENST00000545209 AP1G2O75843 785 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 UFL1O94874 794 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 F13A1P00488 732 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 KLRK1P26718 216 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 GSTO1P78417 241 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 APOBRQ0VD83 1088 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 ST3GAL1Q11201 340 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 COL9A3Q14050 684 aaPredicted RBP8.25□□□□□ -1.09
SPPL3-209ENST00000545209 SART3Q15020 963 aaKnown RBP8.25□□□□□ -1.09
SPPL3-209ENST00000545209 L1TD1Q5T7N2 865 aaKnown RBP8.25□□□□□ -1.09
SPPL3-209ENST00000545209 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 Q6ZNB5 142 aa8.25□□□□□ -1.09
SPPL3-209ENST00000545209 DZIP1Q86YF9 867 aaKnown RBP8.25□□□□□ -1.09
SPPL3-209ENST00000545209 TBC1D10CQ8IV04 446 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms