RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 CHMP4CQ96CF2 233 aa21.18■□□□□ 0.98
CHERP-202ENST00000544299 MKNK2Q9HBH9 465 aa21.18■□□□□ 0.98
CHERP-202ENST00000544299 IL17RBQ9NRM6 502 aa21.18■□□□□ 0.98
CHERP-202ENST00000544299 TSPY2A6NKD2 308 aa21.18■□□□□ 0.98
CHERP-202ENST00000544299 GOLGA8AA7E2F4 631 aa21.18■□□□□ 0.98
CHERP-202ENST00000544299 HMGN5P82970 282 aaKnown RBP21.18■□□□□ 0.98
CHERP-202ENST00000544299 LARP1BQ659C4 914 aaKnown RBP21.18■□□□□ 0.98
CHERP-202ENST00000544299 RCSD1Q6JBY9 416 aa21.18■□□□□ 0.98
CHERP-202ENST00000544299 TTC6Q86TZ1 520 aa21.18■□□□□ 0.98
CHERP-202ENST00000544299 PPFIA3O75145 1194 aa21.17■□□□□ 0.98
CHERP-202ENST00000544299 ADD1P35611 737 aaKnown RBP21.17■□□□□ 0.98
CHERP-202ENST00000544299 RCAN1P53805 252 aa21.17■□□□□ 0.98
CHERP-202ENST00000544299 SH3BP5LQ7L8J4 393 aa21.17■□□□□ 0.98
CHERP-202ENST00000544299 CCDC144CPQ8IYA2 1237 aa21.17■□□□□ 0.98
CHERP-202ENST00000544299 CHAMP1Q96JM3 812 aa21.17■□□□□ 0.98
CHERP-202ENST00000544299 HDAC9Q9UKV0 1011 aa21.17■□□□□ 0.98
CHERP-202ENST00000544299 FZD9O00144 591 aa21.16■□□□□ 0.98
CHERP-202ENST00000544299 SOCS7O14512 581 aa21.16■□□□□ 0.98
CHERP-202ENST00000544299 DHX16O60231 1041 aaKnown RBP21.16■□□□□ 0.98
CHERP-202ENST00000544299 PDCP20941 246 aa21.16■□□□□ 0.98
CHERP-202ENST00000544299 NTRK3Q16288 839 aa21.16■□□□□ 0.98
CHERP-202ENST00000544299 IFIT1BQ5T764 474 aaKnown RBP21.16■□□□□ 0.98
CHERP-202ENST00000544299 MTMR14Q8NCE2 650 aa21.16■□□□□ 0.98
CHERP-202ENST00000544299 ZBED3Q96IU2 234 aaPredicted RBP21.16■□□□□ 0.98
CHERP-202ENST00000544299 TCP11L1Q9NUJ3 509 aa21.16■□□□□ 0.98
CHERP-202ENST00000544299 SHTN1A0MZ66 631 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 ANKS1AQ92625 1134 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 ZNF287Q9HBT7 754 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 COL2A1P02458 1487 aaPredicted RBP21.15■□□□□ 0.98
CHERP-202ENST00000544299 MYH8P13535 1937 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 DICER1Q9UPY3 1922 aaKnown RBP21.15■□□□□ 0.98
CHERP-202ENST00000544299 F13A1P00488 732 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 TCP10Q12799 353 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 TNIP1Q15025 636 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 SYNE3Q6ZMZ3 975 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 CDC37L1Q7L3B6 337 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 ZNF444Q8N0Y2 327 aaPredicted RBP21.15■□□□□ 0.98
CHERP-202ENST00000544299 EHD4Q9H223 541 aa21.15■□□□□ 0.98
CHERP-202ENST00000544299 PLIN4Q96Q06 1357 aa21.14■□□□□ 0.97
CHERP-202ENST00000544299 DDTLA6NHG4 134 aaPredicted RBP21.14■□□□□ 0.97
CHERP-202ENST00000544299 CPLX1O14810 134 aa21.14■□□□□ 0.97
CHERP-202ENST00000544299 DLGAP5Q15398 846 aa21.14■□□□□ 0.97
CHERP-202ENST00000544299 OGFOD1Q8N543 542 aa21.14■□□□□ 0.97
CHERP-202ENST00000544299 NEDD1Q8NHV4 660 aa21.14■□□□□ 0.97
CHERP-202ENST00000544299 SYT17Q9BSW7 474 aa21.14■□□□□ 0.97
CHERP-202ENST00000544299 ATRNL1Q5VV63 1379 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 GREB1LQ9C091 1923 aaPredicted RBP21.13■□□□□ 0.97
CHERP-202ENST00000544299 VPS37CA5D8V6 355 aaPredicted RBP21.13■□□□□ 0.97
CHERP-202ENST00000544299 ENTPD3O75355 529 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 TSPY3P0CV98 308 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 TSPY8P0CW00 308 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 SHMT1P34896 483 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 TROAPQ12815 778 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 RTN1Q16799 776 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 DNAJC18Q9H819 358 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 ZNF70Q9UC06 446 aaPredicted RBP21.13■□□□□ 0.97
CHERP-202ENST00000544299 SERPINB13Q9UIV8 391 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 SBF1O95248 1867 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 GOLGB1Q14789 3259 aaKnown RBP21.13■□□□□ 0.97
CHERP-202ENST00000544299 SLURP2P0DP57 97 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 PDIA4P13667 645 aaKnown RBP21.13■□□□□ 0.97
CHERP-202ENST00000544299 ZNF280AP59817 542 aaPredicted RBP21.13■□□□□ 0.97
CHERP-202ENST00000544299 SPDYE2Q495Y8 402 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 DGKHQ86XP1 1220 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 FAM184AQ8NB25 1140 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 FANCBQ8NB91 859 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.13■□□□□ 0.97
CHERP-202ENST00000544299 DHX36Q9H2U1 1008 aaKnown RBP21.13■□□□□ 0.97
CHERP-202ENST00000544299 SWAP70Q9UH65 585 aa21.13■□□□□ 0.97
CHERP-202ENST00000544299 ZNF541Q9H0D2 1346 aa21.12■□□□□ 0.97
CHERP-202ENST00000544299 GOLGA6L3A6NEY3 463 aa21.12■□□□□ 0.97
CHERP-202ENST00000544299 DDAH1O94760 285 aa21.12■□□□□ 0.97
CHERP-202ENST00000544299 HLA-DOAP06340 250 aa21.12■□□□□ 0.97
CHERP-202ENST00000544299 RPS12P25398 132 aaKnown RBP21.12■□□□□ 0.97
CHERP-202ENST00000544299 CATIPQ7Z7H3 387 aa21.12■□□□□ 0.97
CHERP-202ENST00000544299 ORC3Q9UBD5 711 aaPredicted RBP21.12■□□□□ 0.97
CHERP-202ENST00000544299 CLRN2A0PK11 232 aa21.11■□□□□ 0.97
CHERP-202ENST00000544299 CCDC178Q5BJE1 867 aa21.11■□□□□ 0.97
CHERP-202ENST00000544299 ARHGAP27Q6ZUM4 889 aa21.11■□□□□ 0.97
CHERP-202ENST00000544299 NUP133Q8WUM0 1156 aa21.11■□□□□ 0.97
CHERP-202ENST00000544299 CNTNAP1P78357 1384 aa21.11■□□□□ 0.97
CHERP-202ENST00000544299 CDKL5O76039 1030 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 AKR1B1P15121 316 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 IFNAR1P17181 557 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 NOVP48745 357 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 GMPSP49915 693 aaPredicted RBP21.1■□□□□ 0.97
CHERP-202ENST00000544299 EIF6P56537 245 aaKnown RBP21.1■□□□□ 0.97
CHERP-202ENST00000544299 PHKBQ93100 1093 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 KIF3AQ9Y496 699 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 IGKV6D-41A0A0C4DH26 115 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 FOSBP53539 338 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 KLHL40Q2TBA0 621 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 NBPF11Q86T75 865 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 METTL16Q86W50 562 aaKnown RBP21.1■□□□□ 0.97
CHERP-202ENST00000544299 MYOZ2Q9NPC6 264 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 STK36Q9NRP7 1315 aa21.1■□□□□ 0.97
CHERP-202ENST00000544299 FSD2A1L4K1 749 aa21.09■□□□□ 0.97
CHERP-202ENST00000544299 CALM1P0DP23 149 aa21.09■□□□□ 0.97
CHERP-202ENST00000544299 CALM2P0DP24 149 aa21.09■□□□□ 0.97
CHERP-202ENST00000544299 CALM3P0DP25 149 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms