RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 MLECQ14165 292 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 TMEM201Q5SNT2 666 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 ZBTB37Q5TC79 503 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 UNC5AQ6ZN44 842 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 SPATC1Q76KD6 591 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 LRP10Q7Z4F1 713 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 FBXO11Q86XK2 927 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 C19orf47Q8N9M1 422 aaKnown RBP5.45□□□□□ -1.54
SCFD1-207ENST00000544052 FANCD2OSQ96PS1 177 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 FBRSQ9HAH7 460 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 DISC1Q9NRI5 854 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 CRIM1Q9NZV1 1036 aa5.45□□□□□ -1.54
SCFD1-207ENST00000544052 HCLS1P14317 486 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-207ENST00000544052 CHMP4BP1P59074 171 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 ERVK-24P63145 666 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 RASGRF1Q13972 1273 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 NKG7Q16617 165 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 CDCP2Q5VXM1 449 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 KIAA1211Q6ZU35 1233 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 UBE3DQ7Z6J8 389 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 FAM178BQ8IXR5 827 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 DTWD1Q8N5C7 304 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 DPH2Q9BQC3 489 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-207ENST00000544052 RUSC1Q9BVN2 902 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 PLVAPQ9BX97 442 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 CNNM2Q9H8M5 875 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 TJP2Q9UDY2 1190 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 PFDN2Q9UHV9 154 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 AP4E1Q9UPM8 1137 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 C1QTNF9BB2RNN3 333 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 TTLL4Q14679 1199 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 HP1BP3Q5SSJ5 553 aaPredicted RBP5.44□□□□□ -1.54
SCFD1-207ENST00000544052 NUTM2GQ5VZR2 741 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 ACAD11Q709F0 780 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 TACC3Q9Y6A5 838 aa5.44□□□□□ -1.54
SCFD1-207ENST00000544052 PPM1GO15355 546 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-207ENST00000544052 HNRNPUQ00839 825 aaKnown RBP eCLIP5.43□□□□□ -1.54
SCFD1-207ENST00000544052 IFRD2Q12894 506 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-207ENST00000544052 MTERF2Q49AM1 385 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 INTS3Q68E01 1043 aaKnown RBP5.43□□□□□ -1.54
SCFD1-207ENST00000544052 VHLLQ6RSH7 139 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 MCATQ8IVS2 390 aaKnown RBP5.43□□□□□ -1.54
SCFD1-207ENST00000544052 AGGF1Q8N302 714 aaeCLIP5.43□□□□□ -1.54
SCFD1-207ENST00000544052 FAM13CQ8NE31 585 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 FAM86C1Q9NVL1 165 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 ADAM30Q9UKF2 790 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 TNFRSF10CO14798 259 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 FANCGO15287 622 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 DIAPH1O60610 1272 aaKnown RBP5.43□□□□□ -1.54
SCFD1-207ENST00000544052 NEFMP07197 916 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 ADH5P11766 374 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 RAG1P15918 1043 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 HSD3B2P26439 372 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 SHISA2Q6UWI4 295 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 CD163Q86VB7 1156 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 TAB3Q8N5C8 712 aaPredicted RBP5.43□□□□□ -1.54
SCFD1-207ENST00000544052 RNF214Q8ND24 703 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 TMEM87BQ96K49 555 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 FANCLQ9NW38 375 aa5.43□□□□□ -1.54
SCFD1-207ENST00000544052 ESYT3A0FGR9 886 aa5.42□□□□□ -1.54
SCFD1-207ENST00000544052 RAC1P63000 192 aa5.42□□□□□ -1.54
SCFD1-207ENST00000544052 DYMQ7RTS9 669 aa5.42□□□□□ -1.54
SCFD1-207ENST00000544052 C12orf50Q8NA57 414 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-207ENST00000544052 RNF208Q9H0X6 261 aa5.42□□□□□ -1.54
SCFD1-207ENST00000544052 LEMD3Q9Y2U8 911 aa5.42□□□□□ -1.54
SCFD1-207ENST00000544052 SYNGAP1Q96PV0 1343 aa5.42□□□□□ -1.54
SCFD1-207ENST00000544052 MEGF11A6BM72 1044 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 ENPP3O14638 875 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 SOX4Q06945 474 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-207ENST00000544052 SQSTM1Q13501 440 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 GRIK4Q16099 956 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 KIAA1211LQ6NV74 962 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 SLFN12Q8IYM2 578 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 PHACTR4Q8IZ21 702 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 KLHL6Q8WZ60 621 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 KIF2CQ99661 725 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 CYP4F12Q9HCS2 524 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 KDM2BQ8NHM5 1336 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 UNC13AQ9UPW8 1703 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 ALX3O95076 343 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 CHRNA4P43681 627 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 IGF2-ASQ6U949 168 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.41□□□□□ -1.54
SCFD1-207ENST00000544052 HID1Q8IV36 788 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 MRPL41Q8IXM3 137 aaKnown RBP5.41□□□□□ -1.54
SCFD1-207ENST00000544052 TMEM192Q8IY95 271 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 Q8N3U1 123 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 XAGE3Q8WTP9 111 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 ISL2Q96A47 359 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 SUGCTQ9HAC7 445 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 FAM105AQ9NUU6 356 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 ACTL7BQ9Y614 415 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 SLC12A7Q9Y666 1083 aa5.41□□□□□ -1.54
SCFD1-207ENST00000544052 RBAK-RBAKDNI3L0D1 243 aa5.4□□□□□ -1.54
SCFD1-207ENST00000544052 NCLP19338 710 aaKnown RBP5.4□□□□□ -1.54
SCFD1-207ENST00000544052 YARSP54577 528 aaKnown RBP5.4□□□□□ -1.54
SCFD1-207ENST00000544052 TRIM28Q13263 835 aaKnown RBP5.4□□□□□ -1.54
SCFD1-207ENST00000544052 SLBPQ14493 270 aaKnown RBP eCLIP5.4□□□□□ -1.54
SCFD1-207ENST00000544052 GNPTABQ3T906 1256 aa5.4□□□□□ -1.54
SCFD1-207ENST00000544052 PRAMEF13Q5VWM6 474 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms