RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 JAG1P78504 1218 aa16.19■□□□□ 0.18
SP140-213ENST00000543928 PDE4BQ07343 736 aa16.19■□□□□ 0.18
SP140-213ENST00000543928 GRM1Q13255 1194 aa16.19■□□□□ 0.18
SP140-213ENST00000543928 IMMTQ16891 758 aaKnown RBP16.19■□□□□ 0.18
SP140-213ENST00000543928 SHROOM1Q2M3G4 852 aaPredicted RBP16.19■□□□□ 0.18
SP140-213ENST00000543928 CYP4F22Q6NT55 531 aa16.19■□□□□ 0.18
SP140-213ENST00000543928 RASAL3Q86YV0 1011 aa16.19■□□□□ 0.18
SP140-213ENST00000543928 MKNK2Q9HBH9 465 aa16.19■□□□□ 0.18
SP140-213ENST00000543928 PICK1Q9NRD5 415 aa16.19■□□□□ 0.18
SP140-213ENST00000543928 RBM8AQ9Y5S9 174 aaKnown RBP16.19■□□□□ 0.18
SP140-213ENST00000543928 MYH8P13535 1937 aa16.19■□□□□ 0.18
SP140-213ENST00000543928 LAMA4Q16363 1823 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 PRDM1O75626 825 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 ABCB5Q2M3G0 1257 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 CCDC102AQ96A19 550 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 OPTNQ96CV9 577 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 CAPNS2Q96L46 248 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 NBPF3Q9H094 633 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 ZNF287Q9HBT7 754 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 INCENPQ9NQS7 918 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.18■□□□□ 0.18
SP140-213ENST00000543928 ZBTB21Q9ULJ3 1066 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
SP140-213ENST00000543928 ATAD5Q96QE3 1844 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 SPDYE5A6NIY4 337 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 MPHOSPH10O00566 681 aaKnown RBP16.17■□□□□ 0.18
SP140-213ENST00000543928 REC8O95072 547 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 GH2P01242 217 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 ASNSP08243 561 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 SLC10A3P09131 477 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 AKR1B1P15121 316 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 PTPRAP18433 802 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 RASA1P20936 1047 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 ECE1P42892 770 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 AKNAD1Q5T1N1 836 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 CCDC84Q86UT8 332 aaPredicted RBP16.17■□□□□ 0.18
SP140-213ENST00000543928 ERO1BQ86YB8 467 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 TBC1D10CQ8IV04 446 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 WNK4Q96J92 1243 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 CCDC17Q96LX7 622 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 CABP5Q9NP86 173 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 GINM1Q9NU53 330 aa16.17■□□□□ 0.18
SP140-213ENST00000543928 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
SP140-213ENST00000543928 FAM155AB1AL88 458 aaPredicted RBP16.16■□□□□ 0.18
SP140-213ENST00000543928 FGRP09769 529 aa16.16■□□□□ 0.18
SP140-213ENST00000543928 GJA5P36382 358 aa16.16■□□□□ 0.18
SP140-213ENST00000543928 VEGFBP49765 207 aa16.16■□□□□ 0.18
SP140-213ENST00000543928 MKRN3Q13064 507 aaKnown RBP16.16■□□□□ 0.18
SP140-213ENST00000543928 SPRYD7Q5W111 196 aa16.16■□□□□ 0.18
SP140-213ENST00000543928 MFSD6Q6ZSS7 791 aa16.16■□□□□ 0.18
SP140-213ENST00000543928 ZNF444Q8N0Y2 327 aaPredicted RBP16.16■□□□□ 0.18
SP140-213ENST00000543928 STAG1Q8WVM7 1258 aa16.16■□□□□ 0.18
SP140-213ENST00000543928 OTUD5Q96G74 571 aa16.16■□□□□ 0.18
SP140-213ENST00000543928 TOMM22Q9NS69 142 aa16.16■□□□□ 0.18
SP140-213ENST00000543928 ZHX2Q9Y6X8 837 aa16.16■□□□□ 0.18
SP140-213ENST00000543928 USP17L5A8MUK1 530 aa16.15■□□□□ 0.18
SP140-213ENST00000543928 ORC4O43929 436 aa16.15■□□□□ 0.18
SP140-213ENST00000543928 CYP21A2P08686 494 aa16.15■□□□□ 0.18
SP140-213ENST00000543928 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
SP140-213ENST00000543928 PPATQ06203 517 aa16.15■□□□□ 0.18
SP140-213ENST00000543928 RAB3GAP1Q15042 981 aa16.15■□□□□ 0.18
SP140-213ENST00000543928 RNF41Q9H4P4 317 aaPredicted RBP16.15■□□□□ 0.18
SP140-213ENST00000543928 WDR33Q9C0J8 1336 aaKnown RBP16.15■□□□□ 0.18
SP140-213ENST00000543928 IRF6O14896 467 aa16.14■□□□□ 0.17
SP140-213ENST00000543928 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.17
SP140-213ENST00000543928 ZBTB48P10074 688 aaPredicted RBP16.14■□□□□ 0.17
SP140-213ENST00000543928 GUCY1A2P33402 732 aa16.14■□□□□ 0.17
SP140-213ENST00000543928 PPIL2Q13356 520 aa16.14■□□□□ 0.17
SP140-213ENST00000543928 SEPT2Q15019 361 aa16.14■□□□□ 0.17
SP140-213ENST00000543928 NECTIN1Q15223 517 aa16.14■□□□□ 0.17
SP140-213ENST00000543928 FAM47AQ5JRC9 791 aa16.14■□□□□ 0.17
SP140-213ENST00000543928 RRP12Q5JTH9 1297 aaKnown RBP16.14■□□□□ 0.17
SP140-213ENST00000543928 CREB3L3Q68CJ9 461 aa16.14■□□□□ 0.17
SP140-213ENST00000543928 TMEM179Q6ZVK1 233 aa16.14■□□□□ 0.17
SP140-213ENST00000543928 NEDD4P46934 1319 aa16.14■□□□□ 0.17
SP140-213ENST00000543928 SLC27A2O14975 620 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 AOC2O75106 756 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 TSPY3P0CV98 308 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 TSPY8P0CW00 308 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 TFAP4Q01664 338 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 NOGQ13253 232 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 C8orf34Q49A92 452 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 ZIC5Q96T25 663 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 AS3MTQ9HBK9 375 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 AFG3L2Q9Y4W6 797 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 TAF6LQ9Y6J9 622 aa16.13■□□□□ 0.17
SP140-213ENST00000543928 TSPY2A6NKD2 308 aa16.12■□□□□ 0.17
SP140-213ENST00000543928 SPP2Q13103 211 aa16.12■□□□□ 0.17
SP140-213ENST00000543928 RNF20Q5VTR2 975 aa16.12■□□□□ 0.17
SP140-213ENST00000543928 CLEC10AQ8IUN9 316 aa16.12■□□□□ 0.17
SP140-213ENST00000543928 DNAJC5GQ8N7S2 189 aa16.12■□□□□ 0.17
SP140-213ENST00000543928 ZNF280CQ8ND82 737 aa16.12■□□□□ 0.17
SP140-213ENST00000543928 NEDD1Q8NHV4 660 aa16.12■□□□□ 0.17
SP140-213ENST00000543928 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.12■□□□□ 0.17
SP140-213ENST00000543928 TBC1D2Q9BYX2 928 aa16.12■□□□□ 0.17
SP140-213ENST00000543928 PHIPQ8WWQ0 1821 aa16.12■□□□□ 0.17
SP140-213ENST00000543928 TRIM75PA6NK02 468 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 B4E1Z4 1266 aa16.11■□□□□ 0.17
SP140-213ENST00000543928 E7EWF7 191 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms