RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 GYS1P13807 737 aa16.05■□□□□ 0.16
MSH2-206ENST00000543555 DPCR1Q3MIW9 517 aa16.05■□□□□ 0.16
MSH2-206ENST00000543555 FOXP1Q9H334 677 aaPredicted RBP16.05■□□□□ 0.16
MSH2-206ENST00000543555 LY75O60449 1722 aa16.05■□□□□ 0.16
MSH2-206ENST00000543555 CUTAO60888 179 aa16.05■□□□□ 0.16
MSH2-206ENST00000543555 CHAF1AQ13111 956 aaPredicted RBP16.05■□□□□ 0.16
MSH2-206ENST00000543555 RESP18Q5W5W9 173 aa16.05■□□□□ 0.16
MSH2-206ENST00000543555 BPIFA3Q9BQP9 254 aa16.05■□□□□ 0.16
MSH2-206ENST00000543555 USP17L12C9JPN9 530 aa16.04■□□□□ 0.16
MSH2-206ENST00000543555 USP17L21D6R901 530 aa16.04■□□□□ 0.16
MSH2-206ENST00000543555 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
MSH2-206ENST00000543555 TNRC6CQ9HCJ0 1690 aaKnown RBP16.04■□□□□ 0.16
MSH2-206ENST00000543555 BAZ2AQ9UIF9 1905 aaKnown RBP16.04■□□□□ 0.16
MSH2-206ENST00000543555 MYH13Q9UKX3 1938 aa16.04■□□□□ 0.16
MSH2-206ENST00000543555 PRDM1O75626 825 aa16.04■□□□□ 0.16
MSH2-206ENST00000543555 PRDX5P30044 214 aa16.04■□□□□ 0.16
MSH2-206ENST00000543555 NLRP12P59046 1061 aa16.04■□□□□ 0.16
MSH2-206ENST00000543555 IQCA1Q86XH1 822 aa16.04■□□□□ 0.16
MSH2-206ENST00000543555 CLIC6Q96NY7 704 aa16.04■□□□□ 0.16
MSH2-206ENST00000543555 CRNKL1Q9BZJ0 848 aaKnown RBP16.04■□□□□ 0.16
MSH2-206ENST00000543555 AATFQ9NY61 560 aaKnown RBP eCLIP16.04■□□□□ 0.16
MSH2-206ENST00000543555 IRS2Q9Y4H2 1338 aa16.04■□□□□ 0.16
MSH2-206ENST00000543555 TAF1LQ8IZX4 1826 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 ZBTB22O15209 634 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 BAG6P46379 1132 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 TOB1P50616 345 aaPredicted RBP16.03■□□□□ 0.16
MSH2-206ENST00000543555 IFIT1BQ5T764 474 aaKnown RBP16.03■□□□□ 0.16
MSH2-206ENST00000543555 TXNRD3Q86VQ6 643 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 RILPL1Q5EBL4 403 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 TMED8Q6PL24 325 aaPredicted RBP16.03■□□□□ 0.16
MSH2-206ENST00000543555 CATIPQ7Z7H3 387 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 DCP1AQ9NPI6 582 aaPredicted RBP16.03■□□□□ 0.16
MSH2-206ENST00000543555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.03■□□□□ 0.16
MSH2-206ENST00000543555 MAST2Q6P0Q8 1798 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 UQCRHLA0A096LP55 91 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 BIN1O00499 593 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 UQCRHP07919 91 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 ATP8A2Q9NTI2 1148 aa16.03■□□□□ 0.16
MSH2-206ENST00000543555 LRMPQ12912 555 aa16.02■□□□□ 0.16
MSH2-206ENST00000543555 KRI1Q8N9T8 703 aaKnown RBP16.02■□□□□ 0.16
MSH2-206ENST00000543555 ORC4O43929 436 aa16.02■□□□□ 0.15
MSH2-206ENST00000543555 AKAP17AQ02040 695 aaKnown RBP16.02■□□□□ 0.15
MSH2-206ENST00000543555 NR5A1Q13285 461 aa16.02■□□□□ 0.15
MSH2-206ENST00000543555 TUBE1Q9UJT0 475 aa16.02■□□□□ 0.15
MSH2-206ENST00000543555 FUT2Q10981 343 aa16.01■□□□□ 0.15
MSH2-206ENST00000543555 RBM28Q9NW13 759 aaKnown RBP16.01■□□□□ 0.15
MSH2-206ENST00000543555 CALM1P0DP23 149 aa16.01■□□□□ 0.15
MSH2-206ENST00000543555 CALM2P0DP24 149 aa16.01■□□□□ 0.15
MSH2-206ENST00000543555 CALM3P0DP25 149 aa16.01■□□□□ 0.15
MSH2-206ENST00000543555 EVX2Q03828 476 aa16.01■□□□□ 0.15
MSH2-206ENST00000543555 TROAPQ12815 778 aa16.01■□□□□ 0.15
MSH2-206ENST00000543555 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
MSH2-206ENST00000543555 ARPP21Q9UBL0 812 aaPredicted RBP16.01■□□□□ 0.15
MSH2-206ENST00000543555 MYH2Q9UKX2 1941 aa16.01■□□□□ 0.15
MSH2-206ENST00000543555 DLEC1Q9Y238 1755 aa16.01■□□□□ 0.15
MSH2-206ENST00000543555 GRAPQ13588 217 aa16■□□□□ 0.15
MSH2-206ENST00000543555 SLC15A2Q16348 729 aa16■□□□□ 0.15
MSH2-206ENST00000543555 PKN1Q16512 942 aa16■□□□□ 0.15
MSH2-206ENST00000543555 SPTY2D1Q68D10 685 aaPredicted RBP16■□□□□ 0.15
MSH2-206ENST00000543555 GRAPLQ8TC17 118 aaPredicted RBP16■□□□□ 0.15
MSH2-206ENST00000543555 CACTINQ8WUQ7 758 aaKnown RBP16■□□□□ 0.15
MSH2-206ENST00000543555 KCNH3Q9ULD8 1083 aa16■□□□□ 0.15
MSH2-206ENST00000543555 JAG2Q9Y219 1238 aa16■□□□□ 0.15
MSH2-206ENST00000543555 PRPF3O43395 683 aaKnown RBP16■□□□□ 0.15
MSH2-206ENST00000543555 DDAH1O94760 285 aa16■□□□□ 0.15
MSH2-206ENST00000543555 XBP1P17861 261 aa16■□□□□ 0.15
MSH2-206ENST00000543555 SBK1Q52WX2 424 aa16■□□□□ 0.15
MSH2-206ENST00000543555 SHISA4Q96DD7 197 aa16■□□□□ 0.15
MSH2-206ENST00000543555 FBXO2Q9UK22 296 aaPredicted RBP16■□□□□ 0.15
MSH2-206ENST00000543555 LAMB1P07942 1786 aa16■□□□□ 0.15
MSH2-206ENST00000543555 PLEKHA8P1O95397 391 aa16■□□□□ 0.15
MSH2-206ENST00000543555 PTPREP23469 700 aa16■□□□□ 0.15
MSH2-206ENST00000543555 DDR1Q08345 913 aa16■□□□□ 0.15
MSH2-206ENST00000543555 DZIP1Q86YF9 867 aaKnown RBP16■□□□□ 0.15
MSH2-206ENST00000543555 PRIMPOLQ96LW4 560 aa16■□□□□ 0.15
MSH2-206ENST00000543555 PCDHB6Q9Y5E3 794 aa16■□□□□ 0.15
MSH2-206ENST00000543555 LONRF3Q496Y0 759 aa15.99■□□□□ 0.15
MSH2-206ENST00000543555 KRBA2Q6ZNG9 492 aa15.99■□□□□ 0.15
MSH2-206ENST00000543555 CNBD1Q8NA66 436 aa15.99■□□□□ 0.15
MSH2-206ENST00000543555 ANKIB1Q9P2G1 1089 aa15.99■□□□□ 0.15
MSH2-206ENST00000543555 LEMD3Q9Y2U8 911 aa15.99■□□□□ 0.15
MSH2-206ENST00000543555 CYP2D6P10635 497 aa15.99■□□□□ 0.15
MSH2-206ENST00000543555 METTL16Q86W50 562 aaKnown RBP15.99■□□□□ 0.15
MSH2-206ENST00000543555 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
MSH2-206ENST00000543555 KIAA1551Q9HCM1 1747 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 PSDA5PKW4 1024 aaPredicted RBP15.98■□□□□ 0.15
MSH2-206ENST00000543555 PNOCQ13519 176 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 NCAPHQ15003 741 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 TMTC3Q6ZXV5 915 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 CNNM3Q8NE01 707 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 PHF20Q9BVI0 1012 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 CABP5Q9NP86 173 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 SMTNL1A8MU46 457 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 CCDC88AQ3V6T2 1871 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 STK32BQ9NY57 414 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 CEP131Q9UPN4 1083 aa15.98■□□□□ 0.15
MSH2-206ENST00000543555 V9GY48 417 aaPredicted RBP15.98■□□□□ 0.15
MSH2-206ENST00000543555 IGSF3O75054 1194 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms