RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 BAG3O95817 575 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 PRSS12P56730 875 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 RASA3Q14644 834 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 TICAM2Q86XR7 235 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 CERS3Q8IU89 383 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 TEX11Q8IYF3 940 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 DEFB129Q9H1M3 183 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 ZSWIM6Q9HCJ5 1215 aa12.71□□□□□ -0.37
DDX11-225ENST00000543511 A0A0D9SFI3 127 aa12.7□□□□□ -0.38
DDX11-225ENST00000543511 LRRFIP1Q32MZ4 808 aaKnown RBP12.7□□□□□ -0.38
DDX11-225ENST00000543511 BMP2KLQ5H9B9 411 aa12.7□□□□□ -0.38
DDX11-225ENST00000543511 PRAMEF18Q5VWM3 479 aa12.7□□□□□ -0.38
DDX11-225ENST00000543511 ZFPM1Q8IX07 1006 aa12.7□□□□□ -0.38
DDX11-225ENST00000543511 FAM151AQ8WW52 585 aa12.7□□□□□ -0.38
DDX11-225ENST00000543511 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
DDX11-225ENST00000543511 SEC62Q99442 399 aaKnown RBP12.7□□□□□ -0.38
DDX11-225ENST00000543511 TMEM39BQ9GZU3 492 aa12.7□□□□□ -0.38
DDX11-225ENST00000543511 ARMT1Q9H993 441 aa12.7□□□□□ -0.38
DDX11-225ENST00000543511 ATRNL1Q5VV63 1379 aa12.69□□□□□ -0.38
DDX11-225ENST00000543511 FLT1P17948 1338 aa12.69□□□□□ -0.38
DDX11-225ENST00000543511 TNNI2P48788 182 aa12.69□□□□□ -0.38
DDX11-225ENST00000543511 TCP10Q12799 353 aa12.69□□□□□ -0.38
DDX11-225ENST00000543511 NMIQ13287 307 aaPredicted RBP12.69□□□□□ -0.38
DDX11-225ENST00000543511 PICALMQ13492 652 aa12.69□□□□□ -0.38
DDX11-225ENST00000543511 SH3BP5LQ7L8J4 393 aa12.69□□□□□ -0.38
DDX11-225ENST00000543511 TGFBRAP1Q8WUH2 860 aa12.69□□□□□ -0.38
DDX11-225ENST00000543511 AIDAQ96BJ3 306 aa12.69□□□□□ -0.38
DDX11-225ENST00000543511 STRBPQ96SI9 672 aaKnown RBP12.69□□□□□ -0.38
DDX11-225ENST00000543511 OSBPL5Q9H0X9 879 aaPredicted RBP12.69□□□□□ -0.38
DDX11-225ENST00000543511 MKRN1Q9UHC7 482 aaKnown RBP12.69□□□□□ -0.38
DDX11-225ENST00000543511 LAMA4Q16363 1823 aa12.69□□□□□ -0.38
DDX11-225ENST00000543511 MYH8P13535 1937 aa12.68□□□□□ -0.38
DDX11-225ENST00000543511 ATAD5Q96QE3 1844 aa12.68□□□□□ -0.38
DDX11-225ENST00000543511 GPAA1O43292 621 aa12.68□□□□□ -0.38
DDX11-225ENST00000543511 PRKAB2O43741 272 aa12.68□□□□□ -0.38
DDX11-225ENST00000543511 C1QTNF8P60827 252 aa12.68□□□□□ -0.38
DDX11-225ENST00000543511 NBPF12Q5TAG4 269 aaPredicted RBP12.68□□□□□ -0.38
DDX11-225ENST00000543511 CST9Q5W186 159 aa12.68□□□□□ -0.38
DDX11-225ENST00000543511 CCDC129Q6ZRS4 1044 aa12.68□□□□□ -0.38
DDX11-225ENST00000543511 MAPKAPK5Q8IW41 473 aa12.68□□□□□ -0.38
DDX11-225ENST00000543511 CRNKL1Q9BZJ0 848 aaKnown RBP12.68□□□□□ -0.38
DDX11-225ENST00000543511 HELLSQ9NRZ9 838 aa12.68□□□□□ -0.38
DDX11-225ENST00000543511 DDTLA6NHG4 134 aaPredicted RBP12.67□□□□□ -0.38
DDX11-225ENST00000543511 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
DDX11-225ENST00000543511 FOXP2O15409 715 aa12.67□□□□□ -0.38
DDX11-225ENST00000543511 CELF2O95319 508 aaKnown RBP12.67□□□□□ -0.38
DDX11-225ENST00000543511 ZNF589Q86UQ0 364 aaPredicted RBP12.67□□□□□ -0.38
DDX11-225ENST00000543511 PROCA1Q8NCQ7 364 aaPredicted RBP12.67□□□□□ -0.38
DDX11-225ENST00000543511 SDR42E1Q8WUS8 393 aa12.67□□□□□ -0.38
DDX11-225ENST00000543511 IL25Q9H293 177 aa12.67□□□□□ -0.38
DDX11-225ENST00000543511 DOCK1Q14185 1865 aa12.67□□□□□ -0.38
DDX11-225ENST00000543511 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
DDX11-225ENST00000543511 HIP1O00291 1037 aa12.66□□□□□ -0.38
DDX11-225ENST00000543511 CHMLP26374 656 aa12.66□□□□□ -0.38
DDX11-225ENST00000543511 USP5P45974 858 aa12.66□□□□□ -0.38
DDX11-225ENST00000543511 ZNF408Q9H9D4 720 aa12.66□□□□□ -0.38
DDX11-225ENST00000543511 EPB41L4AQ9HCS5 686 aaPredicted RBP12.66□□□□□ -0.38
DDX11-225ENST00000543511 DCP1AQ9NPI6 582 aaPredicted RBP12.66□□□□□ -0.38
DDX11-225ENST00000543511 DIAPH3Q9NSV4 1193 aa12.66□□□□□ -0.38
DDX11-225ENST00000543511 LHX6Q9UPM6 363 aa12.66□□□□□ -0.38
DDX11-225ENST00000543511 CCDC171Q6TFL3 1326 aa12.65□□□□□ -0.38
DDX11-225ENST00000543511 APLP1P51693 650 aa12.65□□□□□ -0.38
DDX11-225ENST00000543511 SUPT20HL1Q3ZLR7 823 aa12.65□□□□□ -0.38
DDX11-225ENST00000543511 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
DDX11-225ENST00000543511 CWC27Q6UX04 472 aaKnown RBP12.65□□□□□ -0.38
DDX11-225ENST00000543511 GBA2Q9HCG7 927 aaPredicted RBP12.65□□□□□ -0.38
DDX11-225ENST00000543511 ATP8A2Q9NTI2 1148 aa12.65□□□□□ -0.38
DDX11-225ENST00000543511 POLR3EQ9NVU0 708 aa12.65□□□□□ -0.38
DDX11-225ENST00000543511 SAP30BPQ9UHR5 308 aaKnown RBP12.65□□□□□ -0.38
DDX11-225ENST00000543511 PALD1Q9ULE6 856 aa12.65□□□□□ -0.38
DDX11-225ENST00000543511 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
DDX11-225ENST00000543511 SLC4A4Q9Y6R1 1079 aa12.65□□□□□ -0.38
DDX11-225ENST00000543511 RAD50Q92878 1312 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 TMEM88BA6NKF7 163 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 SLURP2P0DP57 97 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 GNAT2P19087 354 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 NF2P35240 595 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 MAP3K10Q02779 954 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 MAP3K11Q16584 847 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 MYSM1Q5VVJ2 828 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 MOB2Q70IA6 237 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 CSRNP1Q96S65 589 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 DNAJC18Q9H819 358 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 PHIPQ8WWQ0 1821 aa12.64□□□□□ -0.39
DDX11-225ENST00000543511 USP2O75604 605 aaPredicted RBP12.63□□□□□ -0.39
DDX11-225ENST00000543511 CYP2D6P10635 497 aa12.63□□□□□ -0.39
DDX11-225ENST00000543511 HSPA6P17066 643 aa12.63□□□□□ -0.39
DDX11-225ENST00000543511 COL9A1P20849 921 aa12.63□□□□□ -0.39
DDX11-225ENST00000543511 FKBP1BP68106 108 aa12.63□□□□□ -0.39
DDX11-225ENST00000543511 VPS53Q5VIR6 699 aa12.63□□□□□ -0.39
DDX11-225ENST00000543511 GIMAP6Q6P9H5 292 aa12.63□□□□□ -0.39
DDX11-225ENST00000543511 METTL16Q86W50 562 aaKnown RBP12.63□□□□□ -0.39
DDX11-225ENST00000543511 ZSCAN29Q8IWY8 852 aaPredicted RBP12.63□□□□□ -0.39
DDX11-225ENST00000543511 ZNF710Q8N1W2 664 aa12.63□□□□□ -0.39
DDX11-225ENST00000543511 DHX36Q9H2U1 1008 aaKnown RBP12.63□□□□□ -0.39
DDX11-225ENST00000543511 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
DDX11-225ENST00000543511 TLL2Q9Y6L7 1015 aa12.63□□□□□ -0.39
DDX11-225ENST00000543511 THSD7BQ9C0I4 1608 aa12.62□□□□□ -0.39
DDX11-225ENST00000543511 GREB1LQ9C091 1923 aaPredicted RBP12.62□□□□□ -0.39
DDX11-225ENST00000543511 ROBO3Q96MS0 1386 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms