RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 ZBTB21Q9ULJ3 1066 aa22.53■■□□□ 1.2
TMED3-204ENST00000543455 KIAA0100Q14667 2235 aaKnown RBP22.52■■□□□ 1.2
TMED3-204ENST00000543455 ASNSP08243 561 aa22.52■■□□□ 1.2
TMED3-204ENST00000543455 SDR42E1Q8WUS8 393 aa22.52■■□□□ 1.2
TMED3-204ENST00000543455 ARMC5Q96C12 935 aa22.52■■□□□ 1.2
TMED3-204ENST00000543455 ARMT1Q9H993 441 aa22.52■■□□□ 1.2
TMED3-204ENST00000543455 SERPINB13Q9UIV8 391 aa22.52■■□□□ 1.2
TMED3-204ENST00000543455 GABPAQ06546 454 aa22.51■■□□□ 1.19
TMED3-204ENST00000543455 TRIM34Q9BYJ4 488 aa22.51■■□□□ 1.19
TMED3-204ENST00000543455 CRNKL1Q9BZJ0 848 aaKnown RBP22.51■■□□□ 1.19
TMED3-204ENST00000543455 DCP1AQ9NPI6 582 aaPredicted RBP22.51■■□□□ 1.19
TMED3-204ENST00000543455 RBBP6Q7Z6E9 1792 aaKnown RBP22.51■■□□□ 1.19
TMED3-204ENST00000543455 PRKAB2O43741 272 aa22.5■■□□□ 1.19
TMED3-204ENST00000543455 MBD4O95243 580 aa22.5■■□□□ 1.19
TMED3-204ENST00000543455 SHMT1P34896 483 aa22.5■■□□□ 1.19
TMED3-204ENST00000543455 MTMR2Q13614 643 aa22.5■■□□□ 1.19
TMED3-204ENST00000543455 OTUD7AQ8TE49 926 aaPredicted RBP22.5■■□□□ 1.19
TMED3-204ENST00000543455 AS3MTQ9HBK9 375 aa22.5■■□□□ 1.19
TMED3-204ENST00000543455 DOCK3Q8IZD9 2030 aa22.49■■□□□ 1.19
TMED3-204ENST00000543455 GH2P01242 217 aa22.49■■□□□ 1.19
TMED3-204ENST00000543455 PSMC4P43686 418 aa22.49■■□□□ 1.19
TMED3-204ENST00000543455 KIF22Q14807 665 aa22.49■■□□□ 1.19
TMED3-204ENST00000543455 UBE3CQ15386 1083 aa22.49■■□□□ 1.19
TMED3-204ENST00000543455 TTC6Q86TZ1 520 aa22.49■■□□□ 1.19
TMED3-204ENST00000543455 GINM1Q9NU53 330 aa22.49■■□□□ 1.19
TMED3-204ENST00000543455 CYP2D6P10635 497 aa22.48■■□□□ 1.19
TMED3-204ENST00000543455 OSBPP22059 807 aa22.48■■□□□ 1.19
TMED3-204ENST00000543455 BACE1P56817 501 aa22.48■■□□□ 1.19
TMED3-204ENST00000543455 ARHGEF6Q15052 776 aa22.48■■□□□ 1.19
TMED3-204ENST00000543455 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.48■■□□□ 1.19
TMED3-204ENST00000543455 MCM9Q9NXL9 1143 aa22.48■■□□□ 1.19
TMED3-204ENST00000543455 SMIM22K7EJ46 135 aa22.47■■□□□ 1.19
TMED3-204ENST00000543455 ZNF333Q96JL9 665 aa22.47■■□□□ 1.19
TMED3-204ENST00000543455 PUS7LQ9H0K6 701 aaKnown RBP22.47■■□□□ 1.19
TMED3-204ENST00000543455 POTEFA5A3E0 1075 aa22.47■■□□□ 1.19
TMED3-204ENST00000543455 GNRH1P01148 92 aa22.47■■□□□ 1.19
TMED3-204ENST00000543455 SRRDQ9UH36 339 aa22.47■■□□□ 1.19
TMED3-204ENST00000543455 SALL3Q9BXA9 1300 aa22.46■■□□□ 1.19
TMED3-204ENST00000543455 POLR3DP05423 398 aaPredicted RBP22.46■■□□□ 1.19
TMED3-204ENST00000543455 GUCY1A2P33402 732 aa22.46■■□□□ 1.19
TMED3-204ENST00000543455 PI4K2BQ8TCG2 481 aa22.46■■□□□ 1.19
TMED3-204ENST00000543455 ASCC2Q9H1I8 757 aaPredicted RBP22.46■■□□□ 1.19
TMED3-204ENST00000543455 MYH8P13535 1937 aa22.45■■□□□ 1.18
TMED3-204ENST00000543455 USP17L10C9JJH3 530 aa22.45■■□□□ 1.18
TMED3-204ENST00000543455 CERKLQ49MI3 558 aaPredicted RBP22.45■■□□□ 1.18
TMED3-204ENST00000543455 KBTBD3Q8NAB2 608 aa22.45■■□□□ 1.18
TMED3-204ENST00000543455 SLC44A5Q8NCS7 719 aa22.45■■□□□ 1.18
TMED3-204ENST00000543455 SMCR8Q8TEV9 937 aaPredicted RBP22.45■■□□□ 1.18
TMED3-204ENST00000543455 EMILIN3Q9NT22 766 aa22.45■■□□□ 1.18
TMED3-204ENST00000543455 MKI67P46013 3256 aaKnown RBP22.45■■□□□ 1.18
TMED3-204ENST00000543455 PDE4DIPQ5VU43 2346 aa22.45■■□□□ 1.18
TMED3-204ENST00000543455 FMNL1O95466 1100 aaPredicted RBP22.44■■□□□ 1.18
TMED3-204ENST00000543455 PRMT2P55345 433 aa22.44■■□□□ 1.18
TMED3-204ENST00000543455 SLC9C1Q4G0N8 1177 aa22.44■■□□□ 1.18
TMED3-204ENST00000543455 ANKRD13CQ8N6S4 541 aa22.44■■□□□ 1.18
TMED3-204ENST00000543455 SH3TC2Q8TF17 1288 aa22.44■■□□□ 1.18
TMED3-204ENST00000543455 PNMA3Q9UL41 463 aa22.44■■□□□ 1.18
TMED3-204ENST00000543455 CYP2D7A0A087X1C5 515 aa22.43■■□□□ 1.18
TMED3-204ENST00000543455 C19orf81C9J6K1 198 aa22.43■■□□□ 1.18
TMED3-204ENST00000543455 HOXA7P31268 230 aaPredicted RBP22.43■■□□□ 1.18
TMED3-204ENST00000543455 ABCB5Q2M3G0 1257 aa22.43■■□□□ 1.18
TMED3-204ENST00000543455 DYNLL2Q96FJ2 89 aa22.43■■□□□ 1.18
TMED3-204ENST00000543455 GPATCH3Q96I76 525 aa22.43■■□□□ 1.18
TMED3-204ENST00000543455 ATP8A2Q9NTI2 1148 aa22.43■■□□□ 1.18
TMED3-204ENST00000543455 GABRQQ9UN88 632 aa22.43■■□□□ 1.18
TMED3-204ENST00000543455 TTC41PQ6P2S7 1318 aa22.43■■□□□ 1.18
TMED3-204ENST00000543455 MYPNQ86TC9 1320 aa22.43■■□□□ 1.18
TMED3-204ENST00000543455 FCGRTP55899 365 aa22.42■■□□□ 1.18
TMED3-204ENST00000543455 PRKCZQ05513 592 aa22.42■■□□□ 1.18
TMED3-204ENST00000543455 HDAC1Q13547 482 aaPredicted RBP22.42■■□□□ 1.18
TMED3-204ENST00000543455 FAM110CQ1W6H9 321 aa22.42■■□□□ 1.18
TMED3-204ENST00000543455 ZSCAN25Q6NSZ9 544 aa22.42■■□□□ 1.18
TMED3-204ENST00000543455 POTEEQ6S8J3 1075 aa22.42■■□□□ 1.18
TMED3-204ENST00000543455 ACER1Q8TDN7 264 aa22.42■■□□□ 1.18
TMED3-204ENST00000543455 OSBP2Q969R2 916 aa22.42■■□□□ 1.18
TMED3-204ENST00000543455 PEX10O60683 326 aa22.41■■□□□ 1.18
TMED3-204ENST00000543455 RAB3GAP1Q15042 981 aa22.41■■□□□ 1.18
TMED3-204ENST00000543455 STRBPQ96SI9 672 aaKnown RBP22.41■■□□□ 1.18
TMED3-204ENST00000543455 TMOD4Q9NZQ9 345 aa22.41■■□□□ 1.18
TMED3-204ENST00000543455 PABPC4Q13310 644 aaKnown RBP eCLIP22.41■■□□□ 1.182e-6■■□□□ 12.9
TMED3-204ENST00000543455 SEPT2Q15019 361 aa22.41■■□□□ 1.18
TMED3-204ENST00000543455 C12orf60Q5U649 245 aa22.41■■□□□ 1.18
TMED3-204ENST00000543455 C12orf42Q96LP6 360 aa22.41■■□□□ 1.18
TMED3-204ENST00000543455 P2RX7Q99572 595 aaKnown RBP22.41■■□□□ 1.18
TMED3-204ENST00000543455 SLC4A4Q9Y6R1 1079 aa22.41■■□□□ 1.18
TMED3-204ENST00000543455 PLXNB2O15031 1838 aa22.4■■□□□ 1.18
TMED3-204ENST00000543455 USP17L12C9JPN9 530 aa22.4■■□□□ 1.18
TMED3-204ENST00000543455 USP17L21D6R901 530 aa22.4■■□□□ 1.18
TMED3-204ENST00000543455 ZYXQ15942 572 aaKnown RBP22.4■■□□□ 1.18
TMED3-204ENST00000543455 USP17L2Q6R6M4 530 aa22.4■■□□□ 1.18
TMED3-204ENST00000543455 TXNRD2Q9NNW7 524 aa22.4■■□□□ 1.18
TMED3-204ENST00000543455 RNF113AO15541 343 aaKnown RBP22.39■■□□□ 1.17
TMED3-204ENST00000543455 MX1P20591 662 aa22.39■■□□□ 1.17
TMED3-204ENST00000543455 HOXD10P28358 340 aa22.39■■□□□ 1.17
TMED3-204ENST00000543455 GCLCP48506 637 aaPredicted RBP22.39■■□□□ 1.17
TMED3-204ENST00000543455 CTR9Q6PD62 1173 aa22.39■■□□□ 1.17
TMED3-204ENST00000543455 APPBP2Q92624 585 aa22.39■■□□□ 1.17
TMED3-204ENST00000543455 KIAA1683Q9H0B3 1180 aa22.39■■□□□ 1.17
TMED3-204ENST00000543455 MORF4L1Q9UBU8 362 aa22.39■■□□□ 1.17
TMED3-204ENST00000543455 A0A1W2PRG0 241 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 448.7 ms