RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 KIF22Q14807 665 aa15.89■□□□□ 0.13
TNFRSF1A-215ENST00000543359 LCORLQ8N3X6 602 aa15.89■□□□□ 0.13
TNFRSF1A-215ENST00000543359 ZNF333Q96JL9 665 aa15.89■□□□□ 0.13
TNFRSF1A-215ENST00000543359 SERPINB13Q9UIV8 391 aa15.89■□□□□ 0.13
TNFRSF1A-215ENST00000543359 ZBTB21Q9ULJ3 1066 aa15.89■□□□□ 0.13
TNFRSF1A-215ENST00000543359 MGAMO43451 1857 aa15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 RBBP6Q7Z6E9 1792 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 POTEFA5A3E0 1075 aa15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 OSBPP22059 807 aa15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 SHMT1P34896 483 aa15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 PRMT2P55345 433 aa15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 DCP1AQ9NPI6 582 aaPredicted RBP15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 ECHDC1Q9NTX5 307 aa15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 SRRDQ9UH36 339 aa15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 DOCK3Q8IZD9 2030 aa15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 MYH7P12883 1935 aa15.88■□□□□ 0.13
TNFRSF1A-215ENST00000543359 NAV1Q8NEY1 1877 aa15.87■□□□□ 0.13
TNFRSF1A-215ENST00000543359 ECM2O94769 699 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-215ENST00000543359 UBE3CQ15386 1083 aa15.87■□□□□ 0.13
TNFRSF1A-215ENST00000543359 TTC6Q86TZ1 520 aa15.87■□□□□ 0.13
TNFRSF1A-215ENST00000543359 SDR42E1Q8WUS8 393 aa15.87■□□□□ 0.13
TNFRSF1A-215ENST00000543359 CRNKL1Q9BZJ0 848 aaKnown RBP15.87■□□□□ 0.13
TNFRSF1A-215ENST00000543359 ARMT1Q9H993 441 aa15.87■□□□□ 0.13
TNFRSF1A-215ENST00000543359 AS3MTQ9HBK9 375 aa15.87■□□□□ 0.13
TNFRSF1A-215ENST00000543359 PRKAB2O43741 272 aa15.86■□□□□ 0.13
TNFRSF1A-215ENST00000543359 GH2P01242 217 aa15.86■□□□□ 0.13
TNFRSF1A-215ENST00000543359 HOXA7P31268 230 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-215ENST00000543359 MTMR2Q13614 643 aa15.86■□□□□ 0.13
TNFRSF1A-215ENST00000543359 SLC9C1Q4G0N8 1177 aa15.86■□□□□ 0.13
TNFRSF1A-215ENST00000543359 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
TNFRSF1A-215ENST00000543359 TRIM34Q9BYJ4 488 aa15.86■□□□□ 0.13
TNFRSF1A-215ENST00000543359 ASCC2Q9H1I8 757 aaPredicted RBP15.86■□□□□ 0.13
TNFRSF1A-215ENST00000543359 EMILIN3Q9NT22 766 aa15.86■□□□□ 0.13
TNFRSF1A-215ENST00000543359 USP17L10C9JJH3 530 aa15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 MBD4O95243 580 aa15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 FMNL1O95466 1100 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 CYP2D6P10635 497 aa15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 GUCY1A2P33402 732 aa15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 TSHZ3Q63HK5 1081 aa15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 SH3TC2Q8TF17 1288 aa15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 YTHDC1Q96MU7 727 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 PUS7LQ9H0K6 701 aaKnown RBP15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 MCM9Q9NXL9 1143 aa15.85■□□□□ 0.13
TNFRSF1A-215ENST00000543359 C19orf81C9J6K1 198 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 SMIM22K7EJ46 135 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 POLR3DP05423 398 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 FCGRTP55899 365 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 PRKCZQ05513 592 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 FAM110CQ1W6H9 321 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 CERKLQ49MI3 558 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 POTEEQ6S8J3 1075 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 NBPF11Q86T75 865 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 ANKRD13CQ8N6S4 541 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 OTUD7AQ8TE49 926 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 SMCR8Q8TEV9 937 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 P2RX7Q99572 595 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 PNMA3Q9UL41 463 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 GABRQQ9UN88 632 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 MYPNQ86TC9 1320 aa15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 BAZ2AQ9UIF9 1905 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-215ENST00000543359 EN2P19622 333 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-215ENST00000543359 HOXD10P28358 340 aa15.83■□□□□ 0.12
TNFRSF1A-215ENST00000543359 GCLCP48506 637 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-215ENST00000543359 PABPC4Q13310 644 aaKnown RBP eCLIP15.83■□□□□ 0.12
TNFRSF1A-215ENST00000543359 ABCB5Q2M3G0 1257 aa15.83■□□□□ 0.12
TNFRSF1A-215ENST00000543359 KBTBD3Q8NAB2 608 aa15.83■□□□□ 0.12
TNFRSF1A-215ENST00000543359 C12orf42Q96LP6 360 aa15.83■□□□□ 0.12
TNFRSF1A-215ENST00000543359 ATP8A2Q9NTI2 1148 aa15.83■□□□□ 0.12
TNFRSF1A-215ENST00000543359 CEP290O15078 2479 aa15.82■□□□□ 0.12
TNFRSF1A-215ENST00000543359 USP17L2Q6R6M4 530 aa15.82■□□□□ 0.12
TNFRSF1A-215ENST00000543359 SLC44A5Q8NCS7 719 aa15.82■□□□□ 0.12
TNFRSF1A-215ENST00000543359 PI4K2BQ8TCG2 481 aa15.82■□□□□ 0.12
TNFRSF1A-215ENST00000543359 ACER1Q8TDN7 264 aa15.82■□□□□ 0.12
TNFRSF1A-215ENST00000543359 DYNLL2Q96FJ2 89 aa15.82■□□□□ 0.12
TNFRSF1A-215ENST00000543359 MORF4L1Q9UBU8 362 aa15.82■□□□□ 0.12
TNFRSF1A-215ENST00000543359 SALL3Q9BXA9 1300 aa15.82■□□□□ 0.12
TNFRSF1A-215ENST00000543359 PEX10O60683 326 aa15.81■□□□□ 0.12
TNFRSF1A-215ENST00000543359 RAB3GAP1Q15042 981 aa15.81■□□□□ 0.12
TNFRSF1A-215ENST00000543359 MTFR1Q15390 333 aa15.81■□□□□ 0.12
TNFRSF1A-215ENST00000543359 C12orf60Q5U649 245 aa15.81■□□□□ 0.12
TNFRSF1A-215ENST00000543359 ZSCAN25Q6NSZ9 544 aa15.81■□□□□ 0.12
TNFRSF1A-215ENST00000543359 STRBPQ96SI9 672 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1A-215ENST00000543359 TXNRD2Q9NNW7 524 aa15.81■□□□□ 0.12
TNFRSF1A-215ENST00000543359 TMOD4Q9NZQ9 345 aa15.81■□□□□ 0.12
TNFRSF1A-215ENST00000543359 TAOK2Q9UL54 1235 aa15.81■□□□□ 0.12
TNFRSF1A-215ENST00000543359 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 CYP2D7A0A087X1C5 515 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 A0A1W2PRG0 241 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 GRK4P32298 578 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 FLT3LGP49771 235 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 HERVK_113P62684 666 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 SEPT2Q15019 361 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 SIAH1Q8IUQ4 282 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 RAET1EQ8TD07 263 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 OSBP2Q969R2 916 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 KIAA1683Q9H0B3 1180 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 RBPJLQ9UBG7 517 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 GJD2Q9UKL4 321 aa15.8■□□□□ 0.12
TNFRSF1A-215ENST00000543359 USP17L12C9JPN9 530 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms