RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 PARP3Q9Y6F1 533 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 ANKRD33BA6NCL7 494 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 E7EWF7 191 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 CCP110O43303 1012 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 TXLNAP40222 546 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 RPS6KA3P51812 740 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 PREPLQ4J6C6 727 aaPredicted RBP12.78□□□□□ -0.36
CDH4-201ENST00000543233 CEP112Q8N8E3 955 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 RABGGTAQ92696 567 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 COL18A1P39060 1754 aa12.78□□□□□ -0.36
CDH4-201ENST00000543233 MAP2K7O14733 419 aa12.77□□□□□ -0.36
CDH4-201ENST00000543233 PPP1R12BO60237 982 aaPredicted RBP12.77□□□□□ -0.36
CDH4-201ENST00000543233 PYGLP06737 847 aa12.77□□□□□ -0.36
CDH4-201ENST00000543233 RHOXF2BP0C7M4 288 aa12.77□□□□□ -0.36
CDH4-201ENST00000543233 EZRP15311 586 aaKnown RBP12.77□□□□□ -0.36
CDH4-201ENST00000543233 GRIK3Q13003 919 aa12.77□□□□□ -0.36
CDH4-201ENST00000543233 BRD3Q15059 726 aa12.77□□□□□ -0.36
CDH4-201ENST00000543233 BCAS4Q8TDM0 211 aa12.77□□□□□ -0.36
CDH4-201ENST00000543233 RHOXF2Q9BQY4 288 aa12.77□□□□□ -0.36
CDH4-201ENST00000543233 ISCA1Q9BUE6 129 aa12.77□□□□□ -0.36
CDH4-201ENST00000543233 PUS7LQ9H0K6 701 aaKnown RBP12.77□□□□□ -0.36
CDH4-201ENST00000543233 IRS4O14654 1257 aaPredicted RBP12.77□□□□□ -0.37
CDH4-201ENST00000543233 KCNQ4P56696 695 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 AOPEPQ8N6M6 819 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
CDH4-201ENST00000543233 DDX19AQ9NUU7 478 aaKnown RBP12.77□□□□□ -0.37
CDH4-201ENST00000543233 DENND2AQ9ULE3 1009 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 MRFAP1Q9Y605 127 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 RXRAP19793 462 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 ZMYM1Q5SVZ6 1142 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 CCDC181Q5TID7 509 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 USPL1Q5W0Q7 1092 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 DHX32Q7L7V1 743 aaKnown RBP12.77□□□□□ -0.37
CDH4-201ENST00000543233 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
CDH4-201ENST00000543233 ABCB6Q9NP58 842 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 A1CFQ9NQ94 594 aaKnown RBP12.77□□□□□ -0.37
CDH4-201ENST00000543233 GJB4Q9NTQ9 266 aa12.77□□□□□ -0.37
CDH4-201ENST00000543233 IQSEC3Q9UPP2 1182 aaPredicted RBP12.77□□□□□ -0.37
CDH4-201ENST00000543233 AFDNP55196 1824 aaKnown RBP12.76□□□□□ -0.37
CDH4-201ENST00000543233 NR1I2O75469 434 aa12.76□□□□□ -0.37
CDH4-201ENST00000543233 NKX1-1Q15270 411 aaPredicted RBP12.76□□□□□ -0.37
CDH4-201ENST00000543233 RNF187Q5TA31 235 aaPredicted RBP12.76□□□□□ -0.37
CDH4-201ENST00000543233 SMIM5Q71RC9 77 aa12.76□□□□□ -0.37
CDH4-201ENST00000543233 CCDC150Q8NCX0 1101 aa12.76□□□□□ -0.37
CDH4-201ENST00000543233 PTPDC1A2A3K4 754 aa12.76□□□□□ -0.37
CDH4-201ENST00000543233 UTP14AQ9BVJ6 771 aaKnown RBP12.76□□□□□ -0.37
CDH4-201ENST00000543233 RANBP1P43487 201 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 MTA1Q13330 715 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 CASP8Q14790 479 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 C1QTNF12Q5T7M4 302 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 NLRP10Q86W26 655 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 DZIP3Q86Y13 1208 aaKnown RBP12.75□□□□□ -0.37
CDH4-201ENST00000543233 SAAL1Q96ER3 474 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 CRACR2AQ9BSW2 395 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 CLSTN2Q9H4D0 955 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 WDHD1O75717 1129 aaPredicted RBP12.75□□□□□ -0.37
CDH4-201ENST00000543233 TUBB4AP04350 444 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 GIGYF2Q6Y7W6 1299 aaKnown RBP12.75□□□□□ -0.37
CDH4-201ENST00000543233 ZBTB38Q8NAP3 1195 aaPredicted RBP12.75□□□□□ -0.37
CDH4-201ENST00000543233 C3orf20Q8ND61 904 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 CERKQ8TCT0 537 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 NUP133Q8WUM0 1156 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 LEO1Q8WVC0 666 aaPredicted RBP12.75□□□□□ -0.37
CDH4-201ENST00000543233 FGAP02671 866 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 HMGB1P09429 215 aaKnown RBP12.75□□□□□ -0.37
CDH4-201ENST00000543233 SLC9C2Q5TAH2 1124 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 ARMCX5Q6P1M9 558 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 KIAA1328Q86T90 577 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 TTLL11Q8NHH1 800 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 HELLSQ9NRZ9 838 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 MYO6Q9UM54 1294 aa12.75□□□□□ -0.37
CDH4-201ENST00000543233 MAP3K15Q6ZN16 1313 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 PCCAP05165 728 aaPredicted RBP12.74□□□□□ -0.37
CDH4-201ENST00000543233 CHMP4BP1P59074 171 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 TMEM132AQ24JP5 1023 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 BEND6Q5SZJ8 279 aaPredicted RBP12.74□□□□□ -0.37
CDH4-201ENST00000543233 MYSM1Q5VVJ2 828 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 CCDC12Q8WUD4 166 aaPredicted RBP12.74□□□□□ -0.37
CDH4-201ENST00000543233 EHD4Q9H223 541 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 INCENPQ9NQS7 918 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 ANKRD18BA2A2Z9 1011 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 TOM1O60784 492 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 KIF4AO95239 1232 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 POLR3DP05423 398 aaPredicted RBP12.74□□□□□ -0.37
CDH4-201ENST00000543233 MCAMP43121 646 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 PHKA1P46020 1223 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 SARM1Q6SZW1 724 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 DHX58Q96C10 678 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 IFNKQ9P0W0 207 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 SH3TC1Q8TE82 1336 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 MRC1P22897 1456 aa12.74□□□□□ -0.37
CDH4-201ENST00000543233 TMCO5BA8MYB1 307 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 GPAA1O43292 621 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 COQ9O75208 318 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 KCNB1Q14721 858 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 PDCD2Q16342 344 aaPredicted RBP12.73□□□□□ -0.37
CDH4-201ENST00000543233 KDM4CQ9H3R0 1056 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 KLC4Q9NSK0 619 aa12.73□□□□□ -0.37
CDH4-201ENST00000543233 CTDNEP1O95476 244 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms