RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 WDR90Q96KV7 1748 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
DDB1-221ENST00000543162 SIPA1L1O43166 1804 aa12.55□□□□□ -0.4
DDB1-221ENST00000543162 MYH8P13535 1937 aa12.55□□□□□ -0.4
DDB1-221ENST00000543162 SH2B2O14492 632 aaPredicted RBP12.55□□□□□ -0.4
DDB1-221ENST00000543162 SHMT1P34896 483 aa12.55□□□□□ -0.4
DDB1-221ENST00000543162 METTL16Q86W50 562 aaKnown RBP12.55□□□□□ -0.4
DDB1-221ENST00000543162 IGDCC4Q8TDY8 1250 aa12.55□□□□□ -0.4
DDB1-221ENST00000543162 DCPSQ96C86 337 aaKnown RBP12.55□□□□□ -0.4
DDB1-221ENST00000543162 TMX3Q96JJ7 454 aa12.55□□□□□ -0.4
DDB1-221ENST00000543162 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
DDB1-221ENST00000543162 CCDC17Q96LX7 622 aa12.55□□□□□ -0.4
DDB1-221ENST00000543162 ZSCAN10Q96SZ4 725 aaPredicted RBP12.55□□□□□ -0.4
DDB1-221ENST00000543162 TAF1DQ9H5J8 278 aaPredicted RBP12.55□□□□□ -0.4
DDB1-221ENST00000543162 DNAJC18Q9H819 358 aa12.55□□□□□ -0.4
DDB1-221ENST00000543162 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDB1-221ENST00000543162 GPHNQ9NQX3 736 aaPredicted RBP12.55□□□□□ -0.4
DDB1-221ENST00000543162 TPCN1Q9ULQ1 816 aa12.55□□□□□ -0.4
DDB1-221ENST00000543162 FAM196BA6NMK8 535 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 SLURP2P0DP57 97 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 LIFRP42702 1097 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 SLC4A3P48751 1232 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 APOBRQ0VD83 1088 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 WTAPQ15007 396 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 NFXL1Q6ZNB6 911 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 PNMA8AQ86V59 439 aaPredicted RBP12.54□□□□□ -0.4
DDB1-221ENST00000543162 CDAN1Q8IWY9 1227 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 TMTC2Q8N394 836 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 NEDD1Q8NHV4 660 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 ZC3H15Q8WU90 426 aaKnown RBP12.54□□□□□ -0.4
DDB1-221ENST00000543162 TEPSINQ96N21 525 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 LY9Q9HBG7 655 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 SH2B1Q9NRF2 756 aaPredicted RBP12.54□□□□□ -0.4
DDB1-221ENST00000543162 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 NAP1L2Q9ULW6 460 aaPredicted RBP12.54□□□□□ -0.4
DDB1-221ENST00000543162 PPP2R3BQ9Y5P8 575 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 TNKSO95271 1327 aa12.54□□□□□ -0.4
DDB1-221ENST00000543162 POTECB2RU33 542 aa12.53□□□□□ -0.4
DDB1-221ENST00000543162 TBC1D12O60347 775 aa12.53□□□□□ -0.4
DDB1-221ENST00000543162 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
DDB1-221ENST00000543162 SEC23AQ15436 765 aa12.53□□□□□ -0.4
DDB1-221ENST00000543162 CERKLQ49MI3 558 aaPredicted RBP12.53□□□□□ -0.4
DDB1-221ENST00000543162 EAPPQ56P03 285 aaPredicted RBP12.53□□□□□ -0.4
DDB1-221ENST00000543162 TATDN1Q6P1N9 297 aa12.53□□□□□ -0.4
DDB1-221ENST00000543162 SULF1Q8IWU6 871 aa12.53□□□□□ -0.4
DDB1-221ENST00000543162 ENAHQ8N8S7 591 aaPredicted RBP12.53□□□□□ -0.4
DDB1-221ENST00000543162 HOOK2Q96ED9 719 aa12.53□□□□□ -0.4
DDB1-221ENST00000543162 TCP11L1Q9NUJ3 509 aa12.53□□□□□ -0.4
DDB1-221ENST00000543162 UTRNP46939 3433 aa12.52□□□□□ -0.4
DDB1-221ENST00000543162 KLF18A0A0U1RQI7 1052 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 CCDC69A6NI79 296 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 MPHOSPH10O00566 681 aaKnown RBP12.52□□□□□ -0.41
DDB1-221ENST00000543162 NMT2O60551 498 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 LARGE1O95461 756 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 AKR1B1P15121 316 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 VEGFAP15692 232 aaPredicted RBP12.52□□□□□ -0.41
DDB1-221ENST00000543162 EVCP57679 992 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 ME3Q16798 604 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.41
DDB1-221ENST00000543162 NBPF12Q5TAG4 269 aaPredicted RBP12.52□□□□□ -0.41
DDB1-221ENST00000543162 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 MIGA2Q7L4E1 593 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 SGMS1Q86VZ5 419 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 ZNF274Q96GC6 653 aaPredicted RBP12.52□□□□□ -0.41
DDB1-221ENST00000543162 SENP2Q9HC62 589 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 IL17RBQ9NRM6 502 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 BRPF3Q9ULD4 1205 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 PLIN4Q96Q06 1357 aa12.52□□□□□ -0.41
DDB1-221ENST00000543162 POLR2AP24928 1970 aaKnown RBP12.52□□□□□ -0.41
DDB1-221ENST00000543162 GOLGA8BA8MQT2 603 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 PDIA3P30101 505 aaKnown RBP12.51□□□□□ -0.41
DDB1-221ENST00000543162 MAP3K10Q02779 954 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 STK3Q13188 491 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 ABCB5Q2M3G0 1257 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 SUPT20HL1Q3ZLR7 823 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 DCAF15Q66K64 600 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 KRT26Q7Z3Y9 468 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 DGKHQ86XP1 1220 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.51□□□□□ -0.41
DDB1-221ENST00000543162 SLKQ9H2G2 1235 aaPredicted RBP12.51□□□□□ -0.41
DDB1-221ENST00000543162 RRAGCQ9HB90 399 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
DDB1-221ENST00000543162 ADM5C9JUS6 153 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 ZBTB43O43298 467 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 PFKFB2O60825 505 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 GDF11O95390 407 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 CUL4AQ13619 759 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 PPP4R3BQ5MIZ7 849 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 PRAMEF18Q5VWM3 479 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 RCSD1Q6JBY9 416 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 APOA5Q6Q788 366 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 TMEM179Q6ZVK1 233 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 CATIPQ7Z7H3 387 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 CCDC83Q8IWF9 413 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 NECAB1Q8N987 351 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 SPRYD3Q8NCJ5 442 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 ANKS1AQ92625 1134 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 CEP95Q96GE4 821 aa12.5□□□□□ -0.41
DDB1-221ENST00000543162 KAT14Q9H8E8 782 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms