RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 PLCD1P51178 756 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 JAG1P78504 1218 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 SP3Q02447 781 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 NUCB1Q02818 461 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 GABPAQ06546 454 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 SPP2Q13103 211 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 SH3D19Q5HYK7 790 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 CHD1LQ86WJ1 897 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 PROCA1Q8NCQ7 364 aaPredicted RBP7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 OSBP2Q969R2 916 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 ERO1AQ96HE7 468 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 ABHD8Q96I13 439 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 STRBPQ96SI9 672 aaKnown RBP7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 PARK7Q99497 189 aaKnown RBP7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 FSD1Q9BTV5 496 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 WDR18Q9BV38 432 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 LNPKQ9C0E8 428 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 SLC45A1Q9Y2W3 748 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 SLC4A4Q9Y6R1 1079 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 HTTP42858 3142 aa7.54□□□□□ -1.2
LRTOMT-220ENST00000542846 ZSWIM8A7E2V4 1837 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 GPAA1O43292 621 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 CYP2D6P10635 497 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 IRX6P78412 446 aaPredicted RBP7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 EVX2Q03828 476 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 PKN2Q16513 984 aaKnown RBP7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 SHROOM1Q2M3G4 852 aaPredicted RBP7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 CERKLQ49MI3 558 aaPredicted RBP7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 ZMYM1Q5SVZ6 1142 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 C12orf60Q5U649 245 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 B4GALNT3Q6L9W6 998 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 GIMAP6Q6P9H5 292 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 C17orf99Q6UX52 265 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 GADL1Q6ZQY3 521 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 TICAM2Q86XR7 235 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 AMOTL1Q8IY63 956 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 EVI5LQ96CN4 794 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 DDRGK1Q96HY6 314 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 OSBPL3Q9H4L5 887 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 ARPP21Q9UBL0 812 aaPredicted RBP7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 SWAP70Q9UH65 585 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 AGTPBP1Q9UPW5 1226 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 MGAMO43451 1857 aa7.53□□□□□ -1.2
LRTOMT-220ENST00000542846 GREB1LQ9C091 1923 aaPredicted RBP7.52□□□□□ -1.2
LRTOMT-220ENST00000542846 ROBO3Q96MS0 1386 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 GSG1L2A8MUP6 293 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 C19orf81C9J6K1 198 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L10C9JJH3 530 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L12C9JPN9 530 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 USP17L21D6R901 530 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 M0R2C6 588 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 GH2P01242 217 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 BCRP11274 1271 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 GNAT2P19087 354 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 HMGCS2P54868 508 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 BACE1P56817 501 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 PABPC4Q13310 644 aaKnown RBP eCLIP7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 MTMR2Q13614 643 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 ARHGEF6Q15052 776 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 ABCB5Q2M3G0 1257 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 SBK1Q52WX2 424 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 TREML2Q5T2D2 321 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 FBXO46Q6PJ61 603 aaPredicted RBP7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 OTOP1Q7RTM1 612 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 CD99L2Q8TCZ2 262 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 CABP5Q9NP86 173 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 PNMA3Q9UL41 463 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 TRIM17Q9Y577 477 aa7.52□□□□□ -1.21
LRTOMT-220ENST00000542846 CYP2D7A0A087X1C5 515 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 CAPN15O75808 1086 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 CYP2C8P10632 490 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 GUCY1A2P33402 732 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 LACTBP83111 547 aaPredicted RBP7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 CAP1Q01518 475 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 CTR9Q6PD62 1173 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 TMEM179Q6ZVK1 233 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 C16orf86Q6ZW13 317 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 PLEKHM2Q8IWE5 1019 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 SLC44A5Q8NCS7 719 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 DYNLL2Q96FJ2 89 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 C12orf42Q96LP6 360 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 SEC62Q99442 399 aaKnown RBP7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 EFCC1Q9HA90 598 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 EPB41L4AQ9HCS5 686 aaPredicted RBP7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 TMOD4Q9NZQ9 345 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 CPA4Q9UI42 421 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 HPS5Q9UPZ3 1129 aa7.51□□□□□ -1.21
LRTOMT-220ENST00000542846 CENPFP49454 3210 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 PATL2C9JE40 543 aaKnown RBP7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 SMIM22K7EJ46 135 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 GNRH1P01148 92 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 AKR1B1P15121 316 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 OSBPP22059 807 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 HOXA7P31268 230 aaPredicted RBP7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 TDO2P48775 406 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 CDK8P49336 464 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 USP14P54578 494 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 KIF22Q14807 665 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 SEPT2Q15019 361 aa7.5□□□□□ -1.21
LRTOMT-220ENST00000542846 RAB3GAP1Q15042 981 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms