RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 SH3BP5LQ7L8J4 393 aa13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 ZGPATQ8N5A5 531 aaKnown RBP13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 PROCA1Q8NCQ7 364 aaPredicted RBP13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 PI4K2BQ8TCG2 481 aa13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 MTMR10Q9NXD2 777 aa13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 ALPK3Q96L96 1907 aa13.95□□□□□ -0.18
SRGAP1-205ENST00000542841 DOCK2Q92608 1830 aa13.94□□□□□ -0.18
SRGAP1-205ENST00000542841 UNC80Q8N2C7 3258 aa13.94□□□□□ -0.18
SRGAP1-205ENST00000542841 PABPC4Q13310 644 aaKnown RBP eCLIP13.94□□□□□ -0.18
SRGAP1-205ENST00000542841 PICALMQ13492 652 aa13.94□□□□□ -0.18
SRGAP1-205ENST00000542841 ATP2B3Q16720 1220 aa13.94□□□□□ -0.18
SRGAP1-205ENST00000542841 CASC1Q6TDU7 716 aa13.94□□□□□ -0.18
SRGAP1-205ENST00000542841 TICAM2Q86XR7 235 aa13.94□□□□□ -0.18
SRGAP1-205ENST00000542841 SLF2Q8IX21 1173 aa13.94□□□□□ -0.18
SRGAP1-205ENST00000542841 UBE2OQ9C0C9 1292 aaKnown RBP13.94□□□□□ -0.18
SRGAP1-205ENST00000542841 GAKO14976 1311 aa13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 SDSP20132 328 aa13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 CCDC84Q86UT8 332 aaPredicted RBP13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 DZIP1Q86YF9 867 aaKnown RBP13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 UPF2Q9HAU5 1272 aaKnown RBP13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 GJD2Q9UKL4 321 aa13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 PTPRFP10586 1907 aa13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 RFX7Q2KHR2 1363 aa13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 DOCK1Q14185 1865 aa13.93□□□□□ -0.18
SRGAP1-205ENST00000542841 CUL9Q8IWT3 2517 aa13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 TBC1D12O60347 775 aa13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 SLURP2P0DP57 97 aa13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 PHKA1P46020 1223 aa13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 TRIM32Q13049 653 aa13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 SPP2Q13103 211 aa13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 ZNF280CQ8ND82 737 aa13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 TBC1D2Q9BYX2 928 aa13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 DDX4Q9NQI0 724 aaKnown RBP13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 OGDHLQ9ULD0 1010 aa13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 RBM19Q9Y4C8 960 aaKnown RBP13.92□□□□□ -0.18
SRGAP1-205ENST00000542841 ATP5JP18859 108 aa13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 BTDP43251 543 aa13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 FAM163AQ96GL9 167 aaPredicted RBP13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 COL25A1Q9BXS0 654 aaPredicted RBP13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 CCDC8Q9H0W5 538 aaPredicted RBP13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 OSBPL5Q9H0X9 879 aaPredicted RBP13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 ABCF2Q9UG63 623 aa13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 DBNLQ9UJU6 430 aaKnown RBP13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 PHIPQ8WWQ0 1821 aa13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 DOCK3Q8IZD9 2030 aa13.91□□□□□ -0.18
SRGAP1-205ENST00000542841 A0A1B0GUL7 405 aa13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 ZBTB22O15209 634 aa13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 HMGCS2P54868 508 aa13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 SPTY2D1Q68D10 685 aaPredicted RBP13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 CCDC102BQ68D86 513 aa13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 TBC1D9Q6ZT07 1266 aa13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 TRIB2Q92519 343 aa13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 EVI5LQ96CN4 794 aa13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 ASCC2Q9H1I8 757 aaPredicted RBP13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 MYH2Q9UKX2 1941 aa13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 DDX60LQ5H9U9 1706 aaKnown RBP13.9□□□□□ -0.18
SRGAP1-205ENST00000542841 MROH7-TTC4A0A0A0MT08 1334 aa13.9□□□□□ -0.19
SRGAP1-205ENST00000542841 PFASO15067 1338 aa13.9□□□□□ -0.19
SRGAP1-205ENST00000542841 TRIM6-TRIM34B2RNG4 842 aa13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 HIP1O00291 1037 aa13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 EPB41L2O43491 1005 aaKnown RBP13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 CYP2B6P20813 491 aa13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 CCDC158Q5M9N0 1113 aa13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 MAP3K21Q5TCX8 1036 aa13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 BCL11AQ9H165 835 aa13.89□□□□□ -0.19
SRGAP1-205ENST00000542841 GPR75-ASB3A0A0A6YYF3 556 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 FAM196BA6NMK8 535 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 XRCC5P13010 732 aaKnown RBP13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 RASGRF1Q13972 1273 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 SH3D19Q5HYK7 790 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 TRMT44Q8IYL2 757 aaKnown RBP13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 SOCS4Q8WXH5 440 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 NUDT12Q9BQG2 462 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 DBNDD2Q9BQY9 259 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 AS3MTQ9HBK9 375 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 TLR7Q9NYK1 1049 aaKnown RBP13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 MORF4L1Q9UBU8 362 aa13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 PDS5AQ29RF7 1337 aaKnown RBP13.88□□□□□ -0.19
SRGAP1-205ENST00000542841 LOC285556D6RIA3 1793 aa13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 COL6A1P12109 1028 aa13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 ADORA1P30542 326 aa13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 CAP2P40123 477 aa13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 RHBDL3P58872 404 aa13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 IRX3P78415 501 aaPredicted RBP13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 MDM2Q00987 491 aaPredicted RBP13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 MECOMQ03112 1051 aa13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 TSHZ3Q63HK5 1081 aa13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 RILPL2Q969X0 211 aa13.87□□□□□ -0.19
SRGAP1-205ENST00000542841 HAUS7Q99871 368 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms