RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 NOL9Q5SY16 702 aaKnown RBP4.26□□□□□ -1.73
CHD4-209ENST00000542717 RASIP1Q5U651 963 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 C1orf53Q5VUE5 145 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 MCTP2Q6DN12 878 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 TRIM67Q6ZTA4 783 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 FRMD5Q7Z6J6 570 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 FAM83AQ86UY5 434 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 SCYL3Q8IZE3 742 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 GPRC5AQ8NFJ5 357 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 TDRD7Q8NHU6 1098 aaKnown RBP4.26□□□□□ -1.73
CHD4-209ENST00000542717 JARID2Q92833 1246 aaPredicted RBP4.26□□□□□ -1.73
CHD4-209ENST00000542717 EDAQ92838 391 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 EDC3Q96F86 508 aaKnown RBP4.26□□□□□ -1.73
CHD4-209ENST00000542717 ISCA1Q9BUE6 129 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 PANK3Q9H999 370 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 AFG3L2Q9Y4W6 797 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 CACNA1HO95180 2353 aa4.26□□□□□ -1.73
CHD4-209ENST00000542717 FRMPD3Q5JV73 1810 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 REV3LO60673 3130 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 EPOPA6NHQ4 379 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 H3BQ06 376 aaPredicted RBP4.25□□□□□ -1.73
CHD4-209ENST00000542717 GLRX3O76003 335 aaKnown RBP4.25□□□□□ -1.73
CHD4-209ENST00000542717 ATP2A2P16615 1042 aaKnown RBP4.25□□□□□ -1.73
CHD4-209ENST00000542717 PTPRAP18433 802 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 NBL1P41271 181 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 MAP1BP46821 2468 aaKnown RBP4.25□□□□□ -1.73
CHD4-209ENST00000542717 PLXNA3P51805 1871 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 LRRC41Q15345 812 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 HERC4Q5GLZ8 1057 aaPredicted RBP4.25□□□□□ -1.73
CHD4-209ENST00000542717 AMER1Q5JTC6 1135 aaPredicted RBP4.25□□□□□ -1.73
CHD4-209ENST00000542717 LRP10Q7Z4F1 713 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 GPR142Q7Z601 462 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 PLEKHH3Q7Z736 793 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 RNF135Q8IUD6 432 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 ADHFE1Q8IWW8 467 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 PLBD2Q8NHP8 589 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 TEKT1Q969V4 418 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 VTI1AQ96AJ9 217 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 MPHOSPH8Q99549 860 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 PAGR1Q9BTK6 254 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 ASCC2Q9H1I8 757 aaPredicted RBP4.25□□□□□ -1.73
CHD4-209ENST00000542717 IL23AQ9NPF7 189 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 STARD7Q9NQZ5 370 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 BRWD1Q9NSI6 2320 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 PRKAG3Q9UGI9 489 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 ZNF112Q9UJU3 913 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 KNSTRNQ9Y448 316 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 LRRFIP2Q9Y608 721 aaKnown RBP4.25□□□□□ -1.73
CHD4-209ENST00000542717 NDUFB9Q9Y6M9 179 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 IVNS1ABPQ9Y6Y0 642 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 FAM208BQ5VWN6 2430 aa4.25□□□□□ -1.73
CHD4-209ENST00000542717 TECTAO75443 2155 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 GBF1Q92538 1859 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 ZFHX4Q86UP3 3567 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 UNC79Q9P2D8 2635 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.24□□□□□ -1.73
CHD4-209ENST00000542717 SOBPA7XYQ1 873 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 KIF28PB7ZC32 967 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 HTATSF1O43719 755 aaKnown RBP4.24□□□□□ -1.73
CHD4-209ENST00000542717 PEX10O60683 326 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 IL1R1P14778 569 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 DSG3P32926 999 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 COL9A3Q14050 684 aaPredicted RBP4.24□□□□□ -1.73
CHD4-209ENST00000542717 MORN1Q5T089 497 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 RNF180Q86T96 592 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 CCDC84Q86UT8 332 aaPredicted RBP4.24□□□□□ -1.73
CHD4-209ENST00000542717 PROCA1Q8NCQ7 364 aaPredicted RBP4.24□□□□□ -1.73
CHD4-209ENST00000542717 TRPV1Q8NER1 839 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 TOX2Q96NM4 488 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 POP1Q99575 1024 aaKnown RBP4.24□□□□□ -1.73
CHD4-209ENST00000542717 PORCNQ9H237 461 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 GREM2Q9H772 168 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 FLRT1Q9NZU1 646 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 DBF4Q9UBU7 674 aaPredicted RBP4.24□□□□□ -1.73
CHD4-209ENST00000542717 MORF4L1Q9UBU8 362 aa4.24□□□□□ -1.73
CHD4-209ENST00000542717 PLXNB2O15031 1838 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 A0A1W2PQ45 241 aaPredicted RBP4.23□□□□□ -1.73
CHD4-209ENST00000542717 A0A1W2PQY0 241 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 C19orf67A6NJJ6 358 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 SNAP23O00161 211 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 TLR3O15455 904 aaKnown RBP4.23□□□□□ -1.73
CHD4-209ENST00000542717 SEPT4O43236 478 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 GALR2O43603 387 aaPredicted RBP4.23□□□□□ -1.73
CHD4-209ENST00000542717 FRAT2O75474 233 aaPredicted RBP4.23□□□□□ -1.73
CHD4-209ENST00000542717 TAF5LO75529 589 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 NEFMP07197 916 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 CYBAP13498 195 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 CYP2C18P33260 490 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 HMGCS2P54868 508 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 CTSWP56202 376 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 CCNA1P78396 465 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 CHRNDQ07001 517 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 SPP2Q13103 211 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 CHAF1AQ13111 956 aaPredicted RBP4.23□□□□□ -1.73
CHD4-209ENST00000542717 FAM47AQ5JRC9 791 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 KIAA0319Q5VV43 1072 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 FKBP1CQ5VVH2 108 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 DPP9Q86TI2 863 aa4.23□□□□□ -1.73
CHD4-209ENST00000542717 ZSCAN29Q8IWY8 852 aaPredicted RBP4.23□□□□□ -1.73
CHD4-209ENST00000542717 GDPD5Q8WTR4 605 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms