RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 MBNL3Q9NUK0 354 aaKnown RBP8.52□□□□□ -1.05
XRCC4-206ENST00000542685 MAPK8IP1Q9UQF2 711 aa8.52□□□□□ -1.05
XRCC4-206ENST00000542685 PAPLNO95428 1278 aa8.51□□□□□ -1.05
XRCC4-206ENST00000542685 TAGLNQ01995 201 aaKnown RBP8.51□□□□□ -1.05
XRCC4-206ENST00000542685 IKZF1Q13422 519 aa8.51□□□□□ -1.05
XRCC4-206ENST00000542685 PRAMEF13Q5VWM6 474 aa8.51□□□□□ -1.05
XRCC4-206ENST00000542685 KRTAP19-1Q8IUB9 90 aa8.51□□□□□ -1.05
XRCC4-206ENST00000542685 RIN3Q8TB24 985 aa8.51□□□□□ -1.05
XRCC4-206ENST00000542685 GZF1Q9H116 711 aaPredicted RBP8.51□□□□□ -1.05
XRCC4-206ENST00000542685 PRDM7Q9NQW5 492 aa8.51□□□□□ -1.05
XRCC4-206ENST00000542685 CNTNAP4Q9C0A0 1308 aa8.51□□□□□ -1.05
XRCC4-206ENST00000542685 PRR33A8MZF0 331 aa8.5□□□□□ -1.05
XRCC4-206ENST00000542685 FAM155AB1AL88 458 aaPredicted RBP8.5□□□□□ -1.05
XRCC4-206ENST00000542685 F6X3S4 739 aa8.5□□□□□ -1.05
XRCC4-206ENST00000542685 BIN1O00499 593 aa8.5□□□□□ -1.05
XRCC4-206ENST00000542685 RLBP1P12271 317 aa8.5□□□□□ -1.05
XRCC4-206ENST00000542685 CAP2P40123 477 aa8.5□□□□□ -1.05
XRCC4-206ENST00000542685 TSNAXIP1Q2TAA8 658 aa8.5□□□□□ -1.05
XRCC4-206ENST00000542685 LETMD1Q6P1Q0 360 aa8.5□□□□□ -1.05
XRCC4-206ENST00000542685 DPH2Q9BQC3 489 aaPredicted RBP8.5□□□□□ -1.05
XRCC4-206ENST00000542685 NOC4LQ9BVI4 516 aaKnown RBP8.5□□□□□ -1.05
XRCC4-206ENST00000542685 CST3P01034 146 aaPredicted RBP8.49□□□□□ -1.05
XRCC4-206ENST00000542685 PGRP06401 933 aa8.49□□□□□ -1.05
XRCC4-206ENST00000542685 ST13P50502 369 aaKnown RBP8.49□□□□□ -1.05
XRCC4-206ENST00000542685 CLCN7P51798 805 aa8.49□□□□□ -1.05
XRCC4-206ENST00000542685 ZP2Q05996 745 aa8.49□□□□□ -1.05
XRCC4-206ENST00000542685 CCDC27Q2M243 656 aa8.49□□□□□ -1.05
XRCC4-206ENST00000542685 SFRP5Q5T4F7 317 aa8.49□□□□□ -1.05
XRCC4-206ENST00000542685 LCE3BQ5TA77 95 aa8.49□□□□□ -1.05
XRCC4-206ENST00000542685 CDKAL1Q5VV42 579 aa8.49□□□□□ -1.05
XRCC4-206ENST00000542685 LRRN4CLQ8ND94 238 aa8.49□□□□□ -1.05
XRCC4-206ENST00000542685 MRS2Q9HD23 443 aa8.49□□□□□ -1.05
XRCC4-206ENST00000542685 SORBS3O60504 671 aa8.48□□□□□ -1.05
XRCC4-206ENST00000542685 CBX7O95931 251 aa8.48□□□□□ -1.05
XRCC4-206ENST00000542685 KRTAP1-3Q8IUG1 177 aa8.48□□□□□ -1.05
XRCC4-206ENST00000542685 MFSD4AQ8N468 514 aa8.48□□□□□ -1.05
XRCC4-206ENST00000542685 PHC3Q8NDX5 983 aa8.48□□□□□ -1.05
XRCC4-206ENST00000542685 TJP2Q9UDY2 1190 aa8.48□□□□□ -1.05
XRCC4-206ENST00000542685 VTI1BQ9UEU0 232 aa8.48□□□□□ -1.05
XRCC4-206ENST00000542685 PITPNM2Q9BZ72 1349 aa8.48□□□□□ -1.05
XRCC4-206ENST00000542685 USP31Q70CQ4 1352 aa8.48□□□□□ -1.05
XRCC4-206ENST00000542685 RBAK-RBAKDNI3L0D1 243 aa8.47□□□□□ -1.05
XRCC4-206ENST00000542685 RPL6Q02878 288 aaKnown RBP8.47□□□□□ -1.05
XRCC4-206ENST00000542685 OGFOD2Q6N063 350 aa8.47□□□□□ -1.05
XRCC4-206ENST00000542685 SLC23A3Q6PIS1 610 aa8.47□□□□□ -1.05
XRCC4-206ENST00000542685 ATG4DQ86TL0 474 aaPredicted RBP8.47□□□□□ -1.05
XRCC4-206ENST00000542685 CRELD1Q96HD1 420 aa8.47□□□□□ -1.05
XRCC4-206ENST00000542685 HSPA12BQ96MM6 686 aa8.47□□□□□ -1.05
XRCC4-206ENST00000542685 TACC3Q9Y6A5 838 aa8.47□□□□□ -1.05
XRCC4-206ENST00000542685 PDE4BQ07343 736 aa8.46□□□□□ -1.06
XRCC4-206ENST00000542685 DIEXFQ68CQ4 756 aaKnown RBP8.46□□□□□ -1.06
XRCC4-206ENST00000542685 ZNF746Q6NUN9 644 aaPredicted RBP8.46□□□□□ -1.06
XRCC4-206ENST00000542685 BNC2Q6ZN30 1099 aaPredicted RBP8.46□□□□□ -1.06
XRCC4-206ENST00000542685 CDH24Q86UP0 819 aa8.46□□□□□ -1.06
XRCC4-206ENST00000542685 TMEM87BQ96K49 555 aa8.46□□□□□ -1.06
XRCC4-206ENST00000542685 ATP13A1Q9HD20 1204 aa8.46□□□□□ -1.06
XRCC4-206ENST00000542685 H3BS24 57 aa8.45□□□□□ -1.06
XRCC4-206ENST00000542685 ZNF865P0CJ78 1059 aaPredicted RBP8.45□□□□□ -1.06
XRCC4-206ENST00000542685 MRPL41Q8IXM3 137 aaKnown RBP8.45□□□□□ -1.06
XRCC4-206ENST00000542685 BPNT1O95861 308 aa8.44□□□□□ -1.06
XRCC4-206ENST00000542685 CAMK2GQ13555 558 aaPredicted RBP8.44□□□□□ -1.06
XRCC4-206ENST00000542685 SLC6A19Q695T7 634 aa8.44□□□□□ -1.06
XRCC4-206ENST00000542685 C22orf34Q6ZV56 151 aa8.44□□□□□ -1.06
XRCC4-206ENST00000542685 FAM168AQ92567 244 aa8.44□□□□□ -1.06
XRCC4-206ENST00000542685 CORINQ9Y5Q5 1042 aa8.44□□□□□ -1.06
XRCC4-206ENST00000542685 CAPN6Q9Y6Q1 641 aa8.44□□□□□ -1.06
XRCC4-206ENST00000542685 CARMIL2Q6F5E8 1435 aa8.44□□□□□ -1.06
XRCC4-206ENST00000542685 PF4P02776 101 aa8.43□□□□□ -1.06
XRCC4-206ENST00000542685 YBX3P16989 372 aaKnown RBP eCLIP8.43□□□□□ -1.06
XRCC4-206ENST00000542685 ERCC3P19447 782 aa8.43□□□□□ -1.06
XRCC4-206ENST00000542685 CYP7A1P22680 504 aa8.43□□□□□ -1.06
XRCC4-206ENST00000542685 GBP2P32456 591 aaPredicted RBP8.43□□□□□ -1.06
XRCC4-206ENST00000542685 RELL1Q8IUW5 271 aa8.43□□□□□ -1.06
XRCC4-206ENST00000542685 MCATQ8IVS2 390 aaKnown RBP8.43□□□□□ -1.06
XRCC4-206ENST00000542685 ACSF2Q96CM8 615 aaPredicted RBP8.43□□□□□ -1.06
XRCC4-206ENST00000542685 CARS2Q9HA77 564 aaKnown RBP8.43□□□□□ -1.06
XRCC4-206ENST00000542685 SEMA3GQ9NS98 782 aa8.43□□□□□ -1.06
XRCC4-206ENST00000542685 F13A1P00488 732 aa8.42□□□□□ -1.06
XRCC4-206ENST00000542685 PLCG1P19174 1290 aa8.42□□□□□ -1.06
XRCC4-206ENST00000542685 LMNB2Q03252 620 aa8.42□□□□□ -1.06
XRCC4-206ENST00000542685 CCDC84Q86UT8 332 aaPredicted RBP8.42□□□□□ -1.06
XRCC4-206ENST00000542685 TMEM74Q96NL1 305 aa8.42□□□□□ -1.06
XRCC4-206ENST00000542685 ADAM30Q9UKF2 790 aa8.42□□□□□ -1.06
XRCC4-206ENST00000542685 ST14Q9Y5Y6 855 aa8.42□□□□□ -1.06
XRCC4-206ENST00000542685 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.42□□□□□ -1.06
XRCC4-206ENST00000542685 CILPO75339 1184 aa8.41□□□□□ -1.06
XRCC4-206ENST00000542685 FAM160A1Q05DH4 1040 aa8.41□□□□□ -1.06
XRCC4-206ENST00000542685 GATAD2BQ8WXI9 593 aa8.41□□□□□ -1.06
XRCC4-206ENST00000542685 LMCD1Q9NZU5 365 aa8.41□□□□□ -1.06
XRCC4-206ENST00000542685 FAM221AA4D161 298 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 MINDY4BA8MYZ0 360 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 UPK3BL1B0FP48 263 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 UPK3BL2E5RIL1 263 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 ETV3P41162 512 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 TNK2Q07912 1038 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 FAM13CQ8NE31 585 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 UBE2FQ969M7 185 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 COX4I2Q96KJ9 171 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 ZSWIM5Q9P217 1185 aa8.4□□□□□ -1.06
XRCC4-206ENST00000542685 KIR3DL1P43629 444 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms