RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 SBK1Q52WX2 424 aa14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 APOBEC3HQ6NTF7 200 aaKnown RBP14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 Q7L0L9 218 aa14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 AMOTL1Q8IY63 956 aa14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 TEX11Q8IYF3 940 aa14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 SH3RF3Q8TEJ3 882 aaPredicted RBP14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 DCP1AQ9NPI6 582 aaPredicted RBP14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 ANAPC4Q9UJX5 808 aa14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 PALD1Q9ULE6 856 aa14.59□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 MYH1P12882 1939 aa14.58□□□□□ -0.07
CACNA1C-IT3-201ENST00000542680 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 PRKAB2O43741 272 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 USP5P45974 858 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 CFAP100Q494V2 611 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 SLC9C1Q4G0N8 1177 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 ANGEL2Q5VTE6 544 aaKnown RBP14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 SDR42E1Q8WUS8 393 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 SHISA4Q96DD7 197 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 IDI2Q9BXS1 227 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 RNF41Q9H4P4 317 aaPredicted RBP14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 MTMR10Q9NXD2 777 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 ROBO3Q96MS0 1386 aa14.58□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 PLA2G5P39877 138 aa14.57□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 DLGAP5Q15398 846 aa14.57□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 FKBP1CQ5VVH2 108 aa14.57□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 NBPF11Q86T75 865 aa14.57□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 IFNL1Q8IU54 200 aa14.57□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 ZBED3Q96IU2 234 aaPredicted RBP14.57□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 TMOD2Q9NZR1 351 aa14.57□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 FLT1P17948 1338 aa14.57□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 MYO1BO43795 1136 aa14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 ST18O60284 1047 aa14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 WDHD1O75717 1129 aaPredicted RBP14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 SLC3A2P08195 630 aaKnown RBP14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 RBM5P52756 815 aaKnown RBP eCLIP14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 SPRYD7Q5W111 196 aa14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 CDC42EP5Q6NZY7 148 aa14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 UBE2Q1Q7Z7E8 422 aa14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 CNNM2Q9H8M5 875 aa14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 ZSWIM6Q9HCJ5 1215 aa14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 USP40Q9NVE5 1235 aa14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 PTCH2Q9Y6C5 1203 aa14.56□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 IGF2BP3O00425 579 aaKnown RBP eCLIP14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 ENTPD3O75355 529 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 MCM2P49736 904 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 PPARAQ07869 468 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 TGFBRAP1Q8WUH2 860 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 STAG1Q8WVM7 1258 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 SNX21Q969T3 373 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 NEK1Q96PY6 1258 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 MYOZ2Q9NPC6 264 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 RAPGEFL1Q9UHV5 662 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 NR2E3Q9Y5X4 410 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 WDR19Q8NEZ3 1342 aa14.55□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 USP17L12C9JPN9 530 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 USP17L21D6R901 530 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 E7EWF7 191 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 MYCP01106 439 aaPredicted RBP14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 FGRP09769 529 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 TRDNQ13061 729 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 SPDYE2Q495Y8 402 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 AKNAD1Q5T1N1 836 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 CTR9Q6PD62 1173 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 BLOC1S2Q6QNY1 142 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 NCOA7Q8NI08 942 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 JAKMIP1Q96N16 626 aaKnown RBP14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 MTA3Q9BTC8 594 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 OSBPL5Q9H0X9 879 aaPredicted RBP14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 DHX36Q9H2U1 1008 aaKnown RBP14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 ZNF287Q9HBT7 754 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 MCM9Q9NXL9 1143 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 CYP46A1Q9Y6A2 500 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 ATRNL1Q5VV63 1379 aa14.54□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 CASTP20810 708 aaKnown RBP14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 INHBEP58166 350 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 CRHR2Q13324 411 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 TTLL12Q14166 644 aaPredicted RBP14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 BECN1Q14457 450 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 C12orf60Q5U649 245 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 RUFY3Q7L099 469 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 RALYLQ86SE5 291 aaKnown RBP14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 TTC6Q86TZ1 520 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 MAPKAPK5Q8IW41 473 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 FBXL16Q8N461 479 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 PRMT6Q96LA8 375 aaPredicted RBP14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 HTATIP2Q9BUP3 242 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 KRT23Q9C075 422 aa14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 ALDH8A1Q9H2A2 487 aaPredicted RBP14.53□□□□□ -0.08
CACNA1C-IT3-201ENST00000542680 MANSC4A6NHS7 340 aaPredicted RBP14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 WNT10BO00744 389 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 ORC4O43929 436 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 HLA-DOAP06340 250 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 RPS6KB1P23443 525 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 HAND2P61296 217 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 SP3Q02447 781 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 PDE4BQ07343 736 aa14.52□□□□□ -0.09
CACNA1C-IT3-201ENST00000542680 TNFAIP1Q13829 316 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms