RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 PPT2Q9UMR5 302 aa6.87□□□□□ -1.31
C2CD3-218ENST00000542484 DNAJA2O60884 412 aa6.86□□□□□ -1.31
C2CD3-218ENST00000542484 LRIG2O94898 1065 aa6.86□□□□□ -1.31
C2CD3-218ENST00000542484 CST3P01034 146 aaPredicted RBP6.86□□□□□ -1.31
C2CD3-218ENST00000542484 DNAJA1P31689 397 aaKnown RBP6.86□□□□□ -1.31
C2CD3-218ENST00000542484 MLECQ14165 292 aa6.86□□□□□ -1.31
C2CD3-218ENST00000542484 LRRFIP1Q32MZ4 808 aaKnown RBP6.86□□□□□ -1.31
C2CD3-218ENST00000542484 ARMCX6Q7L4S7 300 aa6.86□□□□□ -1.31
C2CD3-218ENST00000542484 SLFN12Q8IYM2 578 aa6.86□□□□□ -1.31
C2CD3-218ENST00000542484 RBBP8NLQ8NC74 664 aaPredicted RBP6.86□□□□□ -1.31
C2CD3-218ENST00000542484 YARSP54577 528 aaKnown RBP6.85□□□□□ -1.31
C2CD3-218ENST00000542484 PRAMEF13Q5VWM6 474 aa6.85□□□□□ -1.31
C2CD3-218ENST00000542484 RNF43Q68DV7 783 aa6.85□□□□□ -1.31
C2CD3-218ENST00000542484 MCF2L2Q86YR7 1114 aa6.85□□□□□ -1.31
C2CD3-218ENST00000542484 MFSD2AQ8NA29 543 aa6.85□□□□□ -1.31
C2CD3-218ENST00000542484 TMEM40Q8WWA1 233 aa6.85□□□□□ -1.31
C2CD3-218ENST00000542484 GATA6Q92908 595 aa6.85□□□□□ -1.31
C2CD3-218ENST00000542484 SRRTQ9BXP5 876 aaKnown RBP6.85□□□□□ -1.31
C2CD3-218ENST00000542484 FOXQ1Q9C009 403 aa6.85□□□□□ -1.31
C2CD3-218ENST00000542484 SLC22A31A6NKX4 558 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 GSC2O15499 205 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 DYRK3O43781 588 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 NFIAQ12857 509 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 CDK5R2Q13319 367 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 CDCP2Q5VXM1 449 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 OVOS1Q6IE37 1185 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 CCDC81Q6ZN84 652 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 ZAR1Q86SH2 424 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 FAM13CQ8NE31 585 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.84□□□□□ -1.31
C2CD3-218ENST00000542484 LGR6Q9HBX8 967 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 KLHL3Q9UH77 587 aa6.84□□□□□ -1.31
C2CD3-218ENST00000542484 CHURC1-FNTBB4DL54 471 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 FSTP19883 344 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 GIPRP48546 466 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 EIF6P56537 245 aaKnown RBP6.83□□□□□ -1.32
C2CD3-218ENST00000542484 SF3A1Q15459 793 aaKnown RBP6.83□□□□□ -1.32
C2CD3-218ENST00000542484 SLC51AQ86UW1 340 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 OR6P1Q8NGX9 317 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 SHDQ96IW2 340 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 TBC1D32Q96NH3 1257 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 DPH2Q9BQC3 489 aaPredicted RBP6.83□□□□□ -1.32
C2CD3-218ENST00000542484 DBNDD2Q9BQY9 259 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 ANTXR1Q9H6X2 564 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 CNNM2Q9H8M5 875 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 PRDM10Q9NQV6 1147 aa6.83□□□□□ -1.32
C2CD3-218ENST00000542484 UPK3BL1B0FP48 263 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 UPK3BL2E5RIL1 263 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 IGLV1-40P01703 118 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 ADMP35318 185 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 FBXW10Q5XX13 1052 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 NLRC3Q7RTR2 1065 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 LSRQ86X29 649 aaPredicted RBP6.82□□□□□ -1.32
C2CD3-218ENST00000542484 TAB3Q8N5C8 712 aaPredicted RBP6.82□□□□□ -1.32
C2CD3-218ENST00000542484 GIMAP7Q8NHV1 300 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 CYB5D2Q8WUJ1 264 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 CPLX3Q8WVH0 158 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 SREK1Q8WXA9 508 aaKnown RBP6.82□□□□□ -1.32
C2CD3-218ENST00000542484 ATG4CQ96DT6 458 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 CRBNQ96SW2 442 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 TM9SF2Q99805 663 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 DUSP23Q9BVJ7 150 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 TANGO6Q9C0B7 1094 aa6.82□□□□□ -1.32
C2CD3-218ENST00000542484 TNFRSF10CO14798 259 aa6.81□□□□□ -1.32
C2CD3-218ENST00000542484 SLITRK5O94991 958 aa6.81□□□□□ -1.32
C2CD3-218ENST00000542484 SSBP05455 408 aaKnown RBP eCLIP6.81□□□□□ -1.32
C2CD3-218ENST00000542484 NME1P15531 152 aaKnown RBP6.81□□□□□ -1.32
C2CD3-218ENST00000542484 ARSHQ5FYA8 562 aa6.81□□□□□ -1.32
C2CD3-218ENST00000542484 OGFOD3Q6PK18 319 aa6.81□□□□□ -1.32
C2CD3-218ENST00000542484 TOP6BLQ8N6T0 577 aa6.81□□□□□ -1.32
C2CD3-218ENST00000542484 MFSD14AQ96MC6 490 aa6.81□□□□□ -1.32
C2CD3-218ENST00000542484 F13BP05160 661 aa6.8□□□□□ -1.32
C2CD3-218ENST00000542484 FURINP09958 794 aa6.8□□□□□ -1.32
C2CD3-218ENST00000542484 FAM87AP0C7U9 286 aa6.8□□□□□ -1.32
C2CD3-218ENST00000542484 RAG1P15918 1043 aa6.8□□□□□ -1.32
C2CD3-218ENST00000542484 CCNFP41002 786 aa6.8□□□□□ -1.32
C2CD3-218ENST00000542484 CPSF6Q16630 551 aaKnown RBP eCLIP6.8□□□□□ -1.32
C2CD3-218ENST00000542484 INTS3Q68E01 1043 aaKnown RBP6.8□□□□□ -1.32
C2CD3-218ENST00000542484 LETMD1Q6P1Q0 360 aa6.8□□□□□ -1.32
C2CD3-218ENST00000542484 C19orf47Q8N9M1 422 aaKnown RBP6.8□□□□□ -1.32
C2CD3-218ENST00000542484 ARMC5Q96C12 935 aa6.8□□□□□ -1.32
C2CD3-218ENST00000542484 CCDC74BQ96LY2 380 aa6.8□□□□□ -1.32
C2CD3-218ENST00000542484 MIPEPQ99797 713 aa6.8□□□□□ -1.32
C2CD3-218ENST00000542484 RGS13O14921 159 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 LEFTY1O75610 366 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 GUCY2CP25092 1073 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 CYP27A1Q02318 531 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 PHACTR4Q8IZ21 702 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 SHISA5Q8N114 240 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 FBXL6Q8N531 539 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 DNAJB8Q8NHS0 232 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 SHKBP1Q8TBC3 707 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 XAGE3Q8WTP9 111 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 PPP1R13LQ8WUF5 828 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 METTL22Q9BUU2 404 aaPredicted RBP6.79□□□□□ -1.32
C2CD3-218ENST00000542484 ZNF408Q9H9D4 720 aa6.79□□□□□ -1.32
C2CD3-218ENST00000542484 FAM170BA6NMN3 283 aa6.78□□□□□ -1.32
C2CD3-218ENST00000542484 EOMESO95936 686 aa6.78□□□□□ -1.32
C2CD3-218ENST00000542484 ACRP10323 421 aa6.78□□□□□ -1.32
C2CD3-218ENST00000542484 ATP2B1P20020 1258 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms