RNA–Protein interactions for RNA: ENST00000542264.1

ARAP1-215, Transcript of ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, human

TSL 3

Gene ARAP1, Length 271 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARAP1-215	ENST00000542264	PIH1D3	Q9NQM4	214 aa	Known RBP	12.97	□□□□□ -0.33
ARAP1-215	ENST00000542264	PAK6	Q9NQU5	681 aa	Predicted RBP	12.97	□□□□□ -0.33
ARAP1-215	ENST00000542264	GJD2	Q9UKL4	321 aa		12.97	□□□□□ -0.33
ARAP1-215	ENST00000542264	MYH2	Q9UKX2	1941 aa		12.97	□□□□□ -0.33
ARAP1-215	ENST00000542264	RANBP2	P49792	3224 aa	Known RBP	12.96	□□□□□ -0.33
ARAP1-215	ENST00000542264	RLBP1	P12271	317 aa		12.96	□□□□□ -0.33
ARAP1-215	ENST00000542264	CCAR1	Q8IX12	1150 aa	Known RBP	12.96	□□□□□ -0.33
ARAP1-215	ENST00000542264	TRMT44	Q8IYL2	757 aa	Known RBP	12.96	□□□□□ -0.33
ARAP1-215	ENST00000542264	CRISPLD2	Q9H0B8	497 aa		12.96	□□□□□ -0.33
ARAP1-215	ENST00000542264	SAP30BP	Q9UHR5	308 aa	Known RBP	12.96	□□□□□ -0.33
ARAP1-215	ENST00000542264	CUL9	Q8IWT3	2517 aa		12.96	□□□□□ -0.34
ARAP1-215	ENST00000542264	RPTOR	Q8N122	1335 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	EVI5	O60447	810 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	HMGCR	P04035	888 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	XRCC5	P13010	732 aa	Known RBP	12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	MAPK4	P31152	587 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	HERVK_113	P62684	666 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	TTF1	Q15361	905 aa	Predicted RBP	12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	CEP85	Q6P2H3	762 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L2	Q6R6M4	530 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	CHRDL2	Q6WN34	429 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	NECAB2	Q7Z6G3	386 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	MIER1	Q8N108	512 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	MAGEB6	Q8N7X4	407 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	ANKLE1	Q8NAG6	615 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	NUDT12	Q9BQG2	462 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	HMX1	Q9NP08	348 aa	Predicted RBP	12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	SERPINB13	Q9UIV8	391 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	ZBTB21	Q9ULJ3	1066 aa		12.95	□□□□□ -0.34
ARAP1-215	ENST00000542264	MYH13	Q9UKX3	1938 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	DYNLL1	P63167	89 aa	Known RBP	12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	JAG1	P78504	1218 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	TATDN1	Q6P1N9	297 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	AACS	Q86V21	672 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	MIGA1	Q8NAN2	632 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	SOCS4	Q8WXH5	440 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	EHD4	Q9H223	541 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	DNAJC18	Q9H819	358 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	TLR7	Q9NYK1	1049 aa	Known RBP	12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	RBPJL	Q9UBG7	517 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	COL6A3	P12111	3177 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	TRIOBP	Q9H2D6	2365 aa		12.94	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L15	C9J2P7	530 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L13	C9JLJ4	530 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L11	C9JVI0	530 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L18	D6R9N7	530 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L22	D6RA61	530 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L17	D6RBQ6	530 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L19	D6RCP7	530 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L20	D6RJB6	530 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	GLRX3	O76003	335 aa	Known RBP	12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	GDF11	O95390	407 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	GH2	P01242	217 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP14	P54578	494 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	USP17L24	Q0WX57	530 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	PDE3A	Q14432	1141 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	CERKL	Q49MI3	558 aa	Predicted RBP	12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	CLASRP	Q8N2M8	674 aa	Known RBP	12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	PAWR	Q96IZ0	340 aa	Known RBP	12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	CHMP4B	Q9H444	224 aa	Known RBP	12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	CABP5	Q9NP86	173 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	EMILIN3	Q9NT22	766 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	EXOC6B	Q9Y2D4	811 aa		12.93	□□□□□ -0.34
ARAP1-215	ENST00000542264	HMMR	O75330	724 aa		12.92	□□□□□ -0.34
ARAP1-215	ENST00000542264	CYP2B6	P20813	491 aa		12.92	□□□□□ -0.34
ARAP1-215	ENST00000542264	CCNA1	P78396	465 aa		12.92	□□□□□ -0.34
ARAP1-215	ENST00000542264	DIEXF	Q68CQ4	756 aa	Known RBP	12.92	□□□□□ -0.34
ARAP1-215	ENST00000542264	FEZ1	Q99689	392 aa		12.92	□□□□□ -0.34
ARAP1-215	ENST00000542264	NBPF3	Q9H094	633 aa		12.92	□□□□□ -0.34
ARAP1-215	ENST00000542264	KIAA1683	Q9H0B3	1180 aa		12.92	□□□□□ -0.34
ARAP1-215	ENST00000542264	RBM27	Q9P2N5	1060 aa	Known RBP	12.92	□□□□□ -0.34
ARAP1-215	ENST00000542264	RABGAP1	Q9Y3P9	1069 aa		12.92	□□□□□ -0.34
ARAP1-215	ENST00000542264	MAGEB6P1	A0A0J9YX57	407 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264		A0A1W2PPC1	479 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	POLR3D	P05423	398 aa	Predicted RBP	12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	ERVK-9	P63128	1117 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	ERVK-24	P63145	666 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	RAB3GAP1	Q15042	981 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	ABCB5	Q2M3G0	1257 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264		Q3C1V9	767 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	SLC9C2	Q5TAH2	1124 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	PLEKHH3	Q7Z736	793 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	RHPN1	Q8TCX5	695 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	PANK1	Q8TE04	598 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	KIF1BP	Q96EK5	621 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	C12orf42	Q96LP6	360 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	ANTXR1	Q9H6X2	564 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	CWC22	Q9HCG8	908 aa	Known RBP	12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	TXNRD2	Q9NNW7	524 aa		12.91	□□□□□ -0.34
ARAP1-215	ENST00000542264	RAB11FIP3	O75154	756 aa		12.9	□□□□□ -0.34
ARAP1-215	ENST00000542264	IFIT2	P09913	472 aa	Known RBP	12.9	□□□□□ -0.34
ARAP1-215	ENST00000542264	RGS2	P41220	211 aa		12.9	□□□□□ -0.34
ARAP1-215	ENST00000542264	MAP3K21	Q5TCX8	1036 aa		12.9	□□□□□ -0.34
ARAP1-215	ENST00000542264	CATSPERG	Q6ZRH7	1159 aa		12.9	□□□□□ -0.34
ARAP1-215	ENST00000542264	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.9	□□□□□ -0.34
ARAP1-215	ENST00000542264	PRO3102	Q9H379	93 aa		12.9	□□□□□ -0.34

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