RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 GCNT3O95395 438 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 ATF7P17544 494 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-204ENST00000541819 IDI1Q13907 227 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 PARP10Q53GL7 1025 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 MAP3K21Q5TCX8 1036 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 OTUD6AQ7L8S5 288 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 CCDC105Q8IYK2 499 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 TSKSQ9UJT2 592 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 EVCP57679 992 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 NLRX1Q86UT6 975 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 TRIM50Q86XT4 487 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 RILPQ96NA2 401 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 FAM193BQ96PV7 902 aaPredicted RBP11.9□□□□□ -0.5
GABRB3-204ENST00000541819 PPME1Q9Y570 386 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 PPIP5K1Q6PFW1 1433 aa11.9□□□□□ -0.5
GABRB3-204ENST00000541819 H0YIN7 160 aa11.9□□□□□ -0.51
GABRB3-204ENST00000541819 TBC1D8O95759 1140 aa11.9□□□□□ -0.51
GABRB3-204ENST00000541819 PUM3Q15397 648 aaKnown RBP11.9□□□□□ -0.51
GABRB3-204ENST00000541819 SMCR8Q8TEV9 937 aaPredicted RBP11.9□□□□□ -0.51
GABRB3-204ENST00000541819 RSAD2Q8WXG1 361 aa11.9□□□□□ -0.51
GABRB3-204ENST00000541819 ZNF277Q9NRM2 450 aaPredicted RBP11.9□□□□□ -0.51
GABRB3-204ENST00000541819 PARP2Q9UGN5 583 aa11.9□□□□□ -0.51
GABRB3-204ENST00000541819 IGHDP01880 384 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 POTEDQ86YR6 584 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 LZTS2Q9BRK4 669 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 MRPL44Q9H9J2 332 aaKnown RBP11.89□□□□□ -0.51
GABRB3-204ENST00000541819 ZKSCAN5Q9Y2L8 839 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 CEP104O60308 925 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 FLOT1O75955 427 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 PRKG1Q13976 671 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 NONOQ15233 471 aaKnown RBP eCLIP11.89□□□□□ -0.51
GABRB3-204ENST00000541819 PRR16Q569H4 304 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 DPP8Q6V1X1 898 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-204ENST00000541819 DCAF5Q96JK2 942 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 CDK13Q14004 1512 aaKnown RBP11.89□□□□□ -0.51
GABRB3-204ENST00000541819 SLC1A4P43007 532 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 ITKQ08881 620 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 BSPRYQ5W0U4 402 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 NSMFQ6X4W1 530 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 NFATC2IPQ8NCF5 419 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 AS3MTQ9HBK9 375 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 DENND4BO75064 1496 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-204ENST00000541819 NDUFAB1O14561 156 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 USH1GQ495M9 461 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 FAM47CQ5HY64 1035 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 PDZD4Q76G19 769 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-204ENST00000541819 LRWD1Q9UFC0 647 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 CCNL1Q9UK58 526 aaPredicted RBP11.89□□□□□ -0.51
GABRB3-204ENST00000541819 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
GABRB3-204ENST00000541819 IRX4P78413 519 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 TTC38Q5R3I4 469 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 MYO1AQ9UBC5 1043 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 MAP3K5Q99683 1374 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 A0A1B0GVL5 298 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 B4E1Z4 1266 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 CALCRLQ16602 461 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 ANKRD20A3Q5VUR7 823 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 DEPTORQ8TB45 409 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 C14orf93Q9H972 538 aaKnown RBP11.88□□□□□ -0.51
GABRB3-204ENST00000541819 ARMT1Q9H993 441 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 ABL1P00519 1130 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 TNNI1P19237 187 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 CPXCR1Q8N123 301 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 SNX21Q969T3 373 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 RTEL1Q9NZ71 1219 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 CAPN9O14815 690 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 S100BP04271 92 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-204ENST00000541819 PHBP35232 272 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 INPP1P49441 399 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 PAK2Q13177 524 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 HERC4Q5GLZ8 1057 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-204ENST00000541819 BEND3Q5T5X7 828 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 NIM1KQ8IY84 436 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 DDX21Q9NR30 783 aaKnown RBP eCLIP11.88□□□□□ -0.51
GABRB3-204ENST00000541819 RAB20Q9NX57 234 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 A0A1B0GUL7 405 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 PPFIA2O75334 1257 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 STAM2O75886 525 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 PDE1CQ14123 709 aaPredicted RBP11.88□□□□□ -0.51
GABRB3-204ENST00000541819 SFMBT2Q5VUG0 894 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 NOP9Q86U38 636 aaKnown RBP11.88□□□□□ -0.51
GABRB3-204ENST00000541819 PALM2Q8IXS6 379 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 BAG5Q9UL15 447 aa11.88□□□□□ -0.51
GABRB3-204ENST00000541819 TROVE2P10155 538 aaKnown RBP eCLIP11.87□□□□□ -0.51
GABRB3-204ENST00000541819 CDR2Q01850 454 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 KLHL7Q8IXQ5 586 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 HAUS1Q96CS2 278 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 BICC1Q9H694 974 aaKnown RBP11.87□□□□□ -0.51
GABRB3-204ENST00000541819 CCDC87Q9NVE4 849 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 KCNH3Q9ULD8 1083 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.87□□□□□ -0.51
GABRB3-204ENST00000541819 GLG1Q92896 1179 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 CDCA7Q9BWT1 371 aaPredicted RBP11.87□□□□□ -0.51
GABRB3-204ENST00000541819 KLHL30Q0D2K2 578 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 CWF19L2Q2TBE0 894 aaKnown RBP11.87□□□□□ -0.51
GABRB3-204ENST00000541819 EAPPQ56P03 285 aaPredicted RBP11.87□□□□□ -0.51
GABRB3-204ENST00000541819 NXNQ6DKJ4 435 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 C4orf50Q6ZRC1 276 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms