RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 PDE6AP16499 860 aa17.06■□□□□ 0.32
SUDS3-203ENST00000541591 ZYXQ15942 572 aaKnown RBP17.06■□□□□ 0.32
SUDS3-203ENST00000541591 HSP90AB4PQ58FF6 505 aa17.06■□□□□ 0.32
SUDS3-203ENST00000541591 PRPF38BQ5VTL8 546 aaKnown RBP17.06■□□□□ 0.32
SUDS3-203ENST00000541591 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
SUDS3-203ENST00000541591 BOLA2Q9H3K6 86 aa17.06■□□□□ 0.32
SUDS3-203ENST00000541591 BIN2Q9UBW5 565 aaPredicted RBP17.06■□□□□ 0.32
SUDS3-203ENST00000541591 ZBTB21Q9ULJ3 1066 aa17.06■□□□□ 0.32
SUDS3-203ENST00000541591 RLFQ13129 1914 aa17.06■□□□□ 0.32
SUDS3-203ENST00000541591 ZNF532Q9HCE3 1301 aa17.05■□□□□ 0.32
SUDS3-203ENST00000541591 MAGEB6P1A0A0J9YX57 407 aa17.05■□□□□ 0.32
SUDS3-203ENST00000541591 TNPO2O14787 897 aaKnown RBP17.05■□□□□ 0.32
SUDS3-203ENST00000541591 GRK4P32298 578 aa17.05■□□□□ 0.32
SUDS3-203ENST00000541591 ASCC2Q9H1I8 757 aaPredicted RBP17.05■□□□□ 0.32
SUDS3-203ENST00000541591 AS3MTQ9HBK9 375 aa17.05■□□□□ 0.32
SUDS3-203ENST00000541591 GNRH1P01148 92 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 GH2P01242 217 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 CYP2D6P10635 497 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 FLT3LGP49771 235 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 SLC9C2Q5TAH2 1124 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 LCORLQ8N3X6 602 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 PROCA1Q8NCQ7 364 aaPredicted RBP17.04■□□□□ 0.32
SUDS3-203ENST00000541591 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 SHISA4Q96DD7 197 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 RIOK1Q9BRS2 568 aaKnown RBP17.04■□□□□ 0.32
SUDS3-203ENST00000541591 SLC45A1Q9Y2W3 748 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 CEP290O15078 2479 aa17.04■□□□□ 0.32
SUDS3-203ENST00000541591 ASNSP08243 561 aa17.03■□□□□ 0.32
SUDS3-203ENST00000541591 CCL5P13501 91 aa17.03■□□□□ 0.32
SUDS3-203ENST00000541591 HOXD10P28358 340 aa17.03■□□□□ 0.32
SUDS3-203ENST00000541591 PLCD1P51178 756 aa17.03■□□□□ 0.32
SUDS3-203ENST00000541591 PRMT2P55345 433 aa17.03■□□□□ 0.32
SUDS3-203ENST00000541591 FOXP4Q8IVH2 680 aaPredicted RBP17.03■□□□□ 0.32
SUDS3-203ENST00000541591 ARMT1Q9H993 441 aa17.03■□□□□ 0.32
SUDS3-203ENST00000541591 PNMA3Q9UL41 463 aa17.03■□□□□ 0.32
SUDS3-203ENST00000541591 SMIM22K7EJ46 135 aa17.02■□□□□ 0.32
SUDS3-203ENST00000541591 ADCY3O60266 1144 aa17.02■□□□□ 0.32
SUDS3-203ENST00000541591 RAB3GAP1Q15042 981 aa17.02■□□□□ 0.32
SUDS3-203ENST00000541591 TSHZ3Q63HK5 1081 aa17.02■□□□□ 0.32
SUDS3-203ENST00000541591 METTL16Q86W50 562 aaKnown RBP17.02■□□□□ 0.32
SUDS3-203ENST00000541591 UNC93B1Q9H1C4 597 aa17.02■□□□□ 0.32
SUDS3-203ENST00000541591 TMOD4Q9NZQ9 345 aa17.02■□□□□ 0.32
SUDS3-203ENST00000541591 A0A0G2JMZ2 1700 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 TCRBV5S4A2TA0A5A2 114 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 PRKAB2O43741 272 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 RAB11FIP3O75154 756 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
SUDS3-203ENST00000541591 BACE1P56817 501 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 IRX3P78415 501 aaPredicted RBP17.01■□□□□ 0.31
SUDS3-203ENST00000541591 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 SLC44A5Q8NCS7 719 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 P2RX7Q99572 595 aaKnown RBP17.01■□□□□ 0.31
SUDS3-203ENST00000541591 WDR18Q9BV38 432 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 PAG1Q9NWQ8 432 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 PLXNA1Q9UIW2 1896 aa17.01■□□□□ 0.31
SUDS3-203ENST00000541591 CYP2D7A0A087X1C5 515 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 USP17L10C9JJH3 530 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 MBD4O95243 580 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 INHAP05111 366 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 SHMT1P34896 483 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 TTF1Q15361 905 aaPredicted RBP17■□□□□ 0.31
SUDS3-203ENST00000541591 FAM110CQ1W6H9 321 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 ACER1Q8TDN7 264 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 FEZ1Q99689 392 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 PAGR1Q9BTK6 254 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 RNF208Q9H0X6 261 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 TXNRD2Q9NNW7 524 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 EMILIN3Q9NT22 766 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 MCM9Q9NXL9 1143 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 SERPINB13Q9UIV8 391 aa17■□□□□ 0.31
SUDS3-203ENST00000541591 GREB1LQ9C091 1923 aaPredicted RBP17■□□□□ 0.31
SUDS3-203ENST00000541591 TRIM32Q13049 653 aa16.99■□□□□ 0.31
SUDS3-203ENST00000541591 PABPC4Q13310 644 aaKnown RBP eCLIP16.99■□□□□ 0.31
SUDS3-203ENST00000541591 PDE3AQ14432 1141 aa16.99■□□□□ 0.31
SUDS3-203ENST00000541591 CERKLQ49MI3 558 aaPredicted RBP16.99■□□□□ 0.31
SUDS3-203ENST00000541591 CLEC10AQ8IUN9 316 aa16.99■□□□□ 0.31
SUDS3-203ENST00000541591 DYNLL2Q96FJ2 89 aa16.99■□□□□ 0.31
SUDS3-203ENST00000541591 YTHDC1Q96MU7 727 aaKnown RBP16.99■□□□□ 0.31
SUDS3-203ENST00000541591 TBC1D2Q9BYX2 928 aa16.99■□□□□ 0.31
SUDS3-203ENST00000541591 CRNKL1Q9BZJ0 848 aaKnown RBP16.99■□□□□ 0.31
SUDS3-203ENST00000541591 LRRCC1Q9C099 1032 aa16.99■□□□□ 0.31
SUDS3-203ENST00000541591 MPHOSPH10O00566 681 aaKnown RBP16.98■□□□□ 0.31
SUDS3-203ENST00000541591 ADD2P35612 726 aa16.98■□□□□ 0.31
SUDS3-203ENST00000541591 HERVK_113P62684 666 aa16.98■□□□□ 0.31
SUDS3-203ENST00000541591 ABCB5Q2M3G0 1257 aa16.98■□□□□ 0.31
SUDS3-203ENST00000541591 TATDN1Q6P1N9 297 aa16.98■□□□□ 0.31
SUDS3-203ENST00000541591 SLAIN1Q8ND83 568 aa16.98■□□□□ 0.31
SUDS3-203ENST00000541591 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.98■□□□□ 0.31
SUDS3-203ENST00000541591 COA7Q96BR5 231 aa16.98■□□□□ 0.31
SUDS3-203ENST00000541591 ATP5JP18859 108 aa16.97■□□□□ 0.31
SUDS3-203ENST00000541591 GUCY1A2P33402 732 aa16.97■□□□□ 0.31
SUDS3-203ENST00000541591 UBXN2AP68543 259 aa16.97■□□□□ 0.31
SUDS3-203ENST00000541591 SEPT2Q15019 361 aa16.97■□□□□ 0.31
SUDS3-203ENST00000541591 POTEEQ6S8J3 1075 aa16.97■□□□□ 0.31
SUDS3-203ENST00000541591 TTC6Q86TZ1 520 aa16.97■□□□□ 0.31
SUDS3-203ENST00000541591 HAUS7Q99871 368 aa16.97■□□□□ 0.31
SUDS3-203ENST00000541591 EHD4Q9H223 541 aa16.97■□□□□ 0.31
SUDS3-203ENST00000541591 DCP1AQ9NPI6 582 aaPredicted RBP16.97■□□□□ 0.31
SUDS3-203ENST00000541591 SLC34A2O95436 690 aa16.96■□□□□ 0.31
SUDS3-203ENST00000541591 GCLCP48506 637 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms