RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 ZFYVE28Q9HCC9 887 aa9.77□□□□□ -0.85
LMO3-226ENST00000541589 SNRKQ9NRH2 765 aa9.77□□□□□ -0.85
LMO3-226ENST00000541589 BSDC1Q9NW68 430 aaPredicted RBP9.77□□□□□ -0.85
LMO3-226ENST00000541589 RIPOR2Q9Y4F9 1068 aa9.77□□□□□ -0.85
LMO3-226ENST00000541589 HSPA4P34932 840 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 IREB2P48200 963 aaKnown RBP9.76□□□□□ -0.85
LMO3-226ENST00000541589 TIMM10P62072 90 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 MTFR1Q15390 333 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 TAF1CQ15572 869 aaPredicted RBP9.76□□□□□ -0.85
LMO3-226ENST00000541589 METTL24Q5JXM2 366 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 OPTNQ96CV9 577 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 LRCH3Q96II8 777 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 ARHGAP39Q9C0H5 1083 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 ANTXR1Q9H6X2 564 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 CNNM1Q9NRU3 951 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 PCDHAC2Q9Y5I4 1007 aa9.76□□□□□ -0.85
LMO3-226ENST00000541589 SPEF2Q9C093 1822 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 GNRH1P01148 92 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 GJA8P48165 433 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 PRMT2P55345 433 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 LACTBP83111 547 aaPredicted RBP9.75□□□□□ -0.85
LMO3-226ENST00000541589 NMIQ13287 307 aaPredicted RBP9.75□□□□□ -0.85
LMO3-226ENST00000541589 NBR1Q14596 966 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 DLGAP5Q15398 846 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 ATP2B3Q16720 1220 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 CCDC158Q5M9N0 1113 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 FAM43AQ8N2R8 423 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 CERS5Q8N5B7 392 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 NKX2-3Q8TAU0 364 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 KCNV2Q8TDN2 545 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 DNAJC2Q99543 621 aaKnown RBP9.75□□□□□ -0.85
LMO3-226ENST00000541589 HTATIP2Q9BUP3 242 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 SLKQ9H2G2 1235 aaPredicted RBP9.75□□□□□ -0.85
LMO3-226ENST00000541589 LEMD3Q9Y2U8 911 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 MROH5Q6ZUA9 1318 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 UNC80Q8N2C7 3258 aa9.75□□□□□ -0.85
LMO3-226ENST00000541589 TLR2O60603 784 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 CD2BP2O95400 341 aaKnown RBP9.74□□□□□ -0.85
LMO3-226ENST00000541589 IFIT1P09914 478 aaKnown RBP9.74□□□□□ -0.85
LMO3-226ENST00000541589 KLRK1P26718 216 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 GTF2IP78347 998 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 GORABQ5T7V8 394 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 VGLL2Q8N8G2 317 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 KBTBD3Q8NAB2 608 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 XAGE2Q96GT9 111 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 CDC5LQ99459 802 aaKnown RBP9.74□□□□□ -0.85
LMO3-226ENST00000541589 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 PALD1Q9ULE6 856 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 NR2E3Q9Y5X4 410 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 CCDC171Q6TFL3 1326 aa9.74□□□□□ -0.85
LMO3-226ENST00000541589 CCL15-CCL14A0A0B4J2E2 113 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 PDE8BO95263 885 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 GJB1P08034 283 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 MCM2P49736 904 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 GTF2A2P52657 109 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 RASA3Q14644 834 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 CCL15Q16663 113 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 TTC39AQ5SRH9 613 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.73□□□□□ -0.85
LMO3-226ENST00000541589 EDC3Q96F86 508 aaKnown RBP9.73□□□□□ -0.85
LMO3-226ENST00000541589 ZNF512BQ96KM6 892 aaPredicted RBP9.73□□□□□ -0.85
LMO3-226ENST00000541589 PRMT6Q96LA8 375 aaPredicted RBP9.73□□□□□ -0.85
LMO3-226ENST00000541589 FAM227BQ96M60 508 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 COL25A1Q9BXS0 654 aaPredicted RBP9.73□□□□□ -0.85
LMO3-226ENST00000541589 PAG1Q9NWQ8 432 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 ZSWIM8A7E2V4 1837 aa9.73□□□□□ -0.85
LMO3-226ENST00000541589 A0A0D9SFI3 127 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 CLRN2A0PK11 232 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 CTGFP29279 349 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 ADORA1P30542 326 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 IGHMBP2P38935 993 aaKnown RBP9.72□□□□□ -0.85
LMO3-226ENST00000541589 PUM3Q15397 648 aaKnown RBP9.72□□□□□ -0.85
LMO3-226ENST00000541589 LRRFIP1Q32MZ4 808 aaKnown RBP9.72□□□□□ -0.85
LMO3-226ENST00000541589 PROX2Q3B8N5 592 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 CFAP100Q494V2 611 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 KCNB2Q92953 911 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 MPHOSPH8Q99549 860 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 ZCCHC17Q9NP64 241 aaKnown RBP9.72□□□□□ -0.85
LMO3-226ENST00000541589 CHMP5Q9NZZ3 219 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 STXBP5LQ9Y2K9 1186 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 IRS2Q9Y4H2 1338 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 OTOFQ9HC10 1997 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 ARAP2Q8WZ64 1704 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 ECM29Q5VYK3 1845 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 GRXCR2A6NFK2 248 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 GOLIM4O00461 696 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 MYO1BO43795 1136 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 HSP90AA1P07900 732 aaKnown RBP9.72□□□□□ -0.85
LMO3-226ENST00000541589 FGFR2P21802 821 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 DDIT3P35638 169 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 NEK4P51957 841 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 PTH1RQ03431 593 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 KIF22Q14807 665 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 LPIN2Q92539 896 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 MAP4K1Q92918 833 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 TEPSINQ96N21 525 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 CD209Q9NNX6 404 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 SRRDQ9UH36 339 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 SNX14Q9Y5W7 946 aa9.72□□□□□ -0.85
LMO3-226ENST00000541589 NDUFB9Q9Y6M9 179 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms