RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 TTC6Q86TZ1 520 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 MICU3Q86XE3 530 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 AGBL3Q8NEM8 1001 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 SMARCC2Q8TAQ2 1214 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 GBP4Q96PP9 640 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 MTMR6Q9Y217 621 aa10.15□□□□□ -0.78
THBS3-210ENST00000541576 ZBTB12Q9Y330 459 aaPredicted RBP10.15□□□□□ -0.78
THBS3-210ENST00000541576 METAP2P50579 478 aaKnown RBP eCLIP10.14□□□□□ -0.79
THBS3-210ENST00000541576 NFIAQ12857 509 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 SEC23AQ15436 765 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 LARP1BQ659C4 914 aaKnown RBP10.14□□□□□ -0.79
THBS3-210ENST00000541576 ENAHQ8N8S7 591 aaPredicted RBP10.14□□□□□ -0.79
THBS3-210ENST00000541576 SLC44A5Q8NCS7 719 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 OSBPL5Q9H0X9 879 aaPredicted RBP10.14□□□□□ -0.79
THBS3-210ENST00000541576 ZHX1Q9UKY1 873 aaPredicted RBP10.14□□□□□ -0.79
THBS3-210ENST00000541576 PTPDC1A2A3K4 754 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 CPLX1O14810 134 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 RXRAP19793 462 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 HMGN5P82970 282 aaKnown RBP10.14□□□□□ -0.79
THBS3-210ENST00000541576 C16orf86Q6ZW13 317 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 ZNF444Q8N0Y2 327 aaPredicted RBP10.14□□□□□ -0.79
THBS3-210ENST00000541576 ECM29Q5VYK3 1845 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 ZSCAN22P10073 491 aaPredicted RBP10.14□□□□□ -0.79
THBS3-210ENST00000541576 PDIA4P13667 645 aaKnown RBP10.14□□□□□ -0.79
THBS3-210ENST00000541576 CDK8P49336 464 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 CACNB3P54284 484 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 TFAP4Q01664 338 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 TNIP1Q15025 636 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 IFIT1BQ5T764 474 aaKnown RBP10.14□□□□□ -0.79
THBS3-210ENST00000541576 FAM184AQ8NB25 1140 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 MYL10Q9BUA6 226 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 IDI2Q9BXS1 227 aa10.14□□□□□ -0.79
THBS3-210ENST00000541576 GOLGA8AA7E2F4 631 aa10.13□□□□□ -0.79
THBS3-210ENST00000541576 MSNP26038 577 aaKnown RBP10.13□□□□□ -0.79
THBS3-210ENST00000541576 FOXD4L6Q3SYB3 417 aaPredicted RBP10.13□□□□□ -0.79
THBS3-210ENST00000541576 FOXD4L3Q6VB84 417 aaPredicted RBP10.13□□□□□ -0.79
THBS3-210ENST00000541576 PRMT6Q96LA8 375 aaPredicted RBP10.13□□□□□ -0.79
THBS3-210ENST00000541576 TDRD3Q9H7E2 651 aaKnown RBP10.13□□□□□ -0.79
THBS3-210ENST00000541576 KIF3AQ9Y496 699 aa10.13□□□□□ -0.79
THBS3-210ENST00000541576 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
THBS3-210ENST00000541576 TSPY3P0CV98 308 aa10.13□□□□□ -0.79
THBS3-210ENST00000541576 TSPY8P0CW00 308 aa10.13□□□□□ -0.79
THBS3-210ENST00000541576 RASA1P20936 1047 aa10.13□□□□□ -0.79
THBS3-210ENST00000541576 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
THBS3-210ENST00000541576 DLGAP5Q15398 846 aa10.13□□□□□ -0.79
THBS3-210ENST00000541576 CCDC144CPQ8IYA2 1237 aa10.13□□□□□ -0.79
THBS3-210ENST00000541576 ZNF654Q8IZM8 581 aa10.13□□□□□ -0.79
THBS3-210ENST00000541576 ANP32BQ92688 251 aaKnown RBP10.13□□□□□ -0.79
THBS3-210ENST00000541576 VPS37CA5D8V6 355 aaPredicted RBP10.12□□□□□ -0.79
THBS3-210ENST00000541576 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 NMT2O60551 498 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 HLA-DOAP06340 250 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 FDPSP14324 419 aaKnown RBP10.12□□□□□ -0.79
THBS3-210ENST00000541576 RCAN1P53805 252 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 TCP10Q12799 353 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 MCTP1Q6DN14 999 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 CPLX2Q6PUV4 134 aaKnown RBP10.12□□□□□ -0.79
THBS3-210ENST00000541576 FAM217BQ9NTX9 383 aaPredicted RBP10.12□□□□□ -0.79
THBS3-210ENST00000541576 CDKL5O76039 1030 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 CDC27P30260 824 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 PRELPP51888 382 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 DHX36Q9H2U1 1008 aaKnown RBP10.12□□□□□ -0.79
THBS3-210ENST00000541576 TMOD2Q9NZR1 351 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 FAM198AQ9UFP1 575 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 SERPINB13Q9UIV8 391 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 F13A1P00488 732 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 EIF6P56537 245 aaKnown RBP10.12□□□□□ -0.79
THBS3-210ENST00000541576 GABPAQ06546 454 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 CCDC178Q5BJE1 867 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 ARHGAP27Q6ZUM4 889 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 CDC37L1Q7L3B6 337 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 CATIPQ7Z7H3 387 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 ZFPM1Q8IX07 1006 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 NUP133Q8WUM0 1156 aa10.12□□□□□ -0.79
THBS3-210ENST00000541576 NID2Q14112 1375 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 DDX11L8A8MPP1 907 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 RTN1Q16799 776 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 SYT17Q9BSW7 474 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 TCP11L1Q9NUJ3 509 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 SWAP70Q9UH65 585 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 CCDC196A0A1B0GTZ2 297 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 FZD9O00144 591 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 RPS12P25398 132 aaKnown RBP10.11□□□□□ -0.79
THBS3-210ENST00000541576 DGKHQ86XP1 1220 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 ZSCAN29Q8IWY8 852 aaPredicted RBP10.11□□□□□ -0.79
THBS3-210ENST00000541576 EHD4Q9H223 541 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 IL17RBQ9NRM6 502 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 FSD2A1L4K1 749 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 GOLGA6L22H0YM25 854 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 ENTPD3O75355 529 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 FOSBP53539 338 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 FERMT3Q86UX7 667 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 FANCBQ8NB91 859 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 MTMR14Q8NCE2 650 aa10.11□□□□□ -0.79
THBS3-210ENST00000541576 ORC3Q9UBD5 711 aaPredicted RBP10.11□□□□□ -0.79
THBS3-210ENST00000541576 DDTLA6NHG4 134 aaPredicted RBP10.1□□□□□ -0.79
THBS3-210ENST00000541576 H3BQV1 296 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 DDAH1O94760 285 aa10.1□□□□□ -0.79
THBS3-210ENST00000541576 CALM1P0DP23 149 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms