RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 ZNF862O60290 1169 aa7.45□□□□□ -1.22
RAP1B-224ENST00000541216 CDK5R2Q13319 367 aa7.45□□□□□ -1.22
RAP1B-224ENST00000541216 KCNA10Q16322 511 aa7.45□□□□□ -1.22
RAP1B-224ENST00000541216 TMEM67Q5HYA8 995 aa7.45□□□□□ -1.22
RAP1B-224ENST00000541216 MPRIPQ6WCQ1 1025 aa7.45□□□□□ -1.22
RAP1B-224ENST00000541216 ASB11Q8WXH4 323 aa7.45□□□□□ -1.22
RAP1B-224ENST00000541216 WDR89Q96FK6 387 aaPredicted RBP7.45□□□□□ -1.22
RAP1B-224ENST00000541216 PRDM7Q9NQW5 492 aa7.45□□□□□ -1.22
RAP1B-224ENST00000541216 KRT82Q9NSB4 513 aa7.45□□□□□ -1.22
RAP1B-224ENST00000541216 OXCT1P55809 520 aa7.44□□□□□ -1.22
RAP1B-224ENST00000541216 ERMP1Q7Z2K6 904 aa7.44□□□□□ -1.22
RAP1B-224ENST00000541216 KIRREL1Q96J84 757 aa7.44□□□□□ -1.22
RAP1B-224ENST00000541216 C20orf173Q96LM9 149 aa7.44□□□□□ -1.22
RAP1B-224ENST00000541216 ZC3H12CQ9C0D7 883 aaKnown RBP7.44□□□□□ -1.22
RAP1B-224ENST00000541216 SYNGAP1Q96PV0 1343 aa7.44□□□□□ -1.22
RAP1B-224ENST00000541216 LIG3P49916 1009 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 RPS26P62854 115 aaKnown RBP7.43□□□□□ -1.22
RAP1B-224ENST00000541216 FANCCQ00597 558 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 ZP2Q05996 745 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 TSNAXIP1Q2TAA8 658 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 FYB2Q5VWT5 728 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 TTBK2Q6IQ55 1244 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 AGMOQ6ZNB7 445 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 PHC3Q8NDX5 983 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 WDR18Q9BV38 432 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 EMILIN2Q9BXX0 1053 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 BCL11AQ9H165 835 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 CYP8B1Q9UNU6 501 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 PLAGL2Q9UPG8 496 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 PCDHGC5Q9Y5F6 944 aa7.43□□□□□ -1.22
RAP1B-224ENST00000541216 TCAF2A6NFQ2 919 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 AOC2O75106 756 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 IKZF1Q13422 519 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 MAP3K11Q16584 847 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 KIF4BQ2VIQ3 1234 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 LLGL2Q6P1M3 1020 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 TMEM87AQ8NBN3 555 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 GAL3ST3Q96A11 431 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 RSRP1Q9BUV0 290 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 PIDD1Q9HB75 910 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 CD320Q9NPF0 282 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 SAMM50Q9Y512 469 aa7.42□□□□□ -1.22
RAP1B-224ENST00000541216 TRIM37O94972 964 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 LIG1P18858 919 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 TFE3P19532 575 aaPredicted RBP7.41□□□□□ -1.22
RAP1B-224ENST00000541216 RBM25P49756 843 aaKnown RBP7.41□□□□□ -1.22
RAP1B-224ENST00000541216 PTPN11Q06124 597 aaPredicted RBP7.41□□□□□ -1.22
RAP1B-224ENST00000541216 PDE3AQ14432 1141 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 MAP1SQ66K74 1059 aaPredicted RBP7.41□□□□□ -1.22
RAP1B-224ENST00000541216 SCARA3Q6AZY7 606 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 GPBAR1Q8TDU6 330 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 KCNB2Q92953 911 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 TNKS2Q9H2K2 1166 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 COPRSQ9NQ92 184 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 PPP1R9AQ9ULJ8 1098 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 U3KQE9 123 aa7.41□□□□□ -1.22
RAP1B-224ENST00000541216 RLBP1P12271 317 aa7.4□□□□□ -1.22
RAP1B-224ENST00000541216 LRRC14Q15048 493 aa7.4□□□□□ -1.22
RAP1B-224ENST00000541216 ATG14Q6ZNE5 492 aa7.4□□□□□ -1.22
RAP1B-224ENST00000541216 CYFIP1Q7L576 1253 aa7.4□□□□□ -1.22
RAP1B-224ENST00000541216 RHOVQ96L33 236 aa7.4□□□□□ -1.22
RAP1B-224ENST00000541216 NSUN3Q9H649 340 aaKnown RBP7.4□□□□□ -1.22
RAP1B-224ENST00000541216 CBX8Q9HC52 389 aa7.4□□□□□ -1.22
RAP1B-224ENST00000541216 METTL5Q9NRN9 209 aaKnown RBP7.4□□□□□ -1.22
RAP1B-224ENST00000541216 TLR6Q9Y2C9 796 aa7.4□□□□□ -1.22
RAP1B-224ENST00000541216 PCDHB5Q9Y5E4 795 aa7.4□□□□□ -1.22
RAP1B-224ENST00000541216 F6X3S4 739 aa7.39□□□□□ -1.23
RAP1B-224ENST00000541216 SCAMP3O14828 347 aaKnown RBP7.39□□□□□ -1.23
RAP1B-224ENST00000541216 FOXD2O60548 495 aaPredicted RBP7.39□□□□□ -1.23
RAP1B-224ENST00000541216 MED14OSP0DP75 135 aa7.39□□□□□ -1.23
RAP1B-224ENST00000541216 METTL16Q86W50 562 aaKnown RBP7.39□□□□□ -1.23
RAP1B-224ENST00000541216 TMEM74Q96NL1 305 aa7.39□□□□□ -1.23
RAP1B-224ENST00000541216 DIRC2Q96SL1 478 aa7.39□□□□□ -1.23
RAP1B-224ENST00000541216 PARD6AQ9NPB6 346 aa7.39□□□□□ -1.23
RAP1B-224ENST00000541216 KBTBD4Q9NVX7 518 aa7.39□□□□□ -1.23
RAP1B-224ENST00000541216 TMPRSS2O15393 492 aa7.38□□□□□ -1.23
RAP1B-224ENST00000541216 NUAK1O60285 661 aa7.38□□□□□ -1.23
RAP1B-224ENST00000541216 ITIH2P19823 946 aa7.38□□□□□ -1.23
RAP1B-224ENST00000541216 ZNF76P36508 570 aa7.38□□□□□ -1.23
RAP1B-224ENST00000541216 ZC3H12AQ5D1E8 599 aaKnown RBP7.38□□□□□ -1.23
RAP1B-224ENST00000541216 ATXN3LQ9H3M9 355 aa7.38□□□□□ -1.23
RAP1B-224ENST00000541216 GARTP22102 1010 aa7.37□□□□□ -1.23
RAP1B-224ENST00000541216 HDLBPQ00341 1268 aaKnown RBP7.37□□□□□ -1.23
RAP1B-224ENST00000541216 LMNB2Q03252 620 aa7.37□□□□□ -1.23
RAP1B-224ENST00000541216 SEPT6Q14141 434 aa7.37□□□□□ -1.23
RAP1B-224ENST00000541216 SMYD4Q8IYR2 804 aaPredicted RBP7.37□□□□□ -1.23
RAP1B-224ENST00000541216 DUSP23Q9BVJ7 150 aa7.37□□□□□ -1.23
RAP1B-224ENST00000541216 KCNQ5Q9NR82 932 aa7.37□□□□□ -1.23
RAP1B-224ENST00000541216 GGT7Q9UJ14 662 aa7.37□□□□□ -1.23
RAP1B-224ENST00000541216 LEFTY1O75610 366 aa7.36□□□□□ -1.23
RAP1B-224ENST00000541216 SYN1P17600 705 aa7.36□□□□□ -1.23
RAP1B-224ENST00000541216 GLDCP23378 1020 aa7.36□□□□□ -1.23
RAP1B-224ENST00000541216 ID3Q02535 119 aa7.36□□□□□ -1.23
RAP1B-224ENST00000541216 RING1Q06587 406 aa7.36□□□□□ -1.23
RAP1B-224ENST00000541216 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.36□□□□□ -1.23
RAP1B-224ENST00000541216 HS2ST1Q7LGA3 356 aa7.36□□□□□ -1.23
RAP1B-224ENST00000541216 DISC1Q9NRI5 854 aa7.36□□□□□ -1.23
RAP1B-224ENST00000541216 IGSF5Q9NSI5 407 aa7.36□□□□□ -1.23
RAP1B-224ENST00000541216 SMG5Q9UPR3 1016 aaKnown RBP7.36□□□□□ -1.23
RAP1B-224ENST00000541216 PF4P02776 101 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 809.3 ms