RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 MBD4O95243 580 aa17.15■□□□□ 0.34
LTBR-209ENST00000541102 ASNSP08243 561 aa17.15■□□□□ 0.34
LTBR-209ENST00000541102 HMGCS2P54868 508 aa17.15■□□□□ 0.34
LTBR-209ENST00000541102 TREML2Q5T2D2 321 aa17.15■□□□□ 0.34
LTBR-209ENST00000541102 CENPQQ7L2Z9 268 aaPredicted RBP17.15■□□□□ 0.34
LTBR-209ENST00000541102 SDR42E1Q8WUS8 393 aa17.15■□□□□ 0.34
LTBR-209ENST00000541102 MCM9Q9NXL9 1143 aa17.15■□□□□ 0.34
LTBR-209ENST00000541102 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
LTBR-209ENST00000541102 SERPINB13Q9UIV8 391 aa17.15■□□□□ 0.34
LTBR-209ENST00000541102 TTC41PQ6P2S7 1318 aa17.15■□□□□ 0.34
LTBR-209ENST00000541102 SIPA1L1O43166 1804 aa17.14■□□□□ 0.34
LTBR-209ENST00000541102 FOCADQ5VW36 1801 aa17.14■□□□□ 0.34
LTBR-209ENST00000541102 MYH1P12882 1939 aa17.14■□□□□ 0.33
LTBR-209ENST00000541102 PRKAB2O43741 272 aa17.14■□□□□ 0.33
LTBR-209ENST00000541102 PLCD1P51178 756 aa17.14■□□□□ 0.33
LTBR-209ENST00000541102 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
LTBR-209ENST00000541102 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
LTBR-209ENST00000541102 TBC1D2Q9BYX2 928 aa17.14■□□□□ 0.33
LTBR-209ENST00000541102 ZBTB21Q9ULJ3 1066 aa17.14■□□□□ 0.33
LTBR-209ENST00000541102 AGTPBP1Q9UPW5 1226 aa17.14■□□□□ 0.33
LTBR-209ENST00000541102 PHIPQ8WWQ0 1821 aa17.13■□□□□ 0.33
LTBR-209ENST00000541102 PSMC4P43686 418 aa17.13■□□□□ 0.33
LTBR-209ENST00000541102 RGS19P49795 217 aa17.13■□□□□ 0.33
LTBR-209ENST00000541102 MLLT1Q03111 559 aaPredicted RBP17.13■□□□□ 0.33
LTBR-209ENST00000541102 UBE3CQ15386 1083 aa17.13■□□□□ 0.33
LTBR-209ENST00000541102 SMCR8Q8TEV9 937 aaPredicted RBP17.13■□□□□ 0.33
LTBR-209ENST00000541102 WDR18Q9BV38 432 aa17.13■□□□□ 0.33
LTBR-209ENST00000541102 EHD4Q9H223 541 aa17.13■□□□□ 0.33
LTBR-209ENST00000541102 SLC45A1Q9Y2W3 748 aa17.13■□□□□ 0.33
LTBR-209ENST00000541102 ADGRA2Q96PE1 1338 aa17.13■□□□□ 0.33
LTBR-209ENST00000541102 FMNL1O95466 1100 aaPredicted RBP17.12■□□□□ 0.33
LTBR-209ENST00000541102 GH2P01242 217 aa17.12■□□□□ 0.33
LTBR-209ENST00000541102 CYP2D6P10635 497 aa17.12■□□□□ 0.33
LTBR-209ENST00000541102 BACE1P56817 501 aa17.12■□□□□ 0.33
LTBR-209ENST00000541102 EVX2Q03828 476 aa17.12■□□□□ 0.33
LTBR-209ENST00000541102 MTMR2Q13614 643 aa17.12■□□□□ 0.33
LTBR-209ENST00000541102 CERKLQ49MI3 558 aaPredicted RBP17.12■□□□□ 0.33
LTBR-209ENST00000541102 TATDN1Q6P1N9 297 aa17.12■□□□□ 0.33
LTBR-209ENST00000541102 PROCA1Q8NCQ7 364 aaPredicted RBP17.12■□□□□ 0.33
LTBR-209ENST00000541102 DCP1AQ9NPI6 582 aaPredicted RBP17.12■□□□□ 0.33
LTBR-209ENST00000541102 GINM1Q9NU53 330 aa17.12■□□□□ 0.33
LTBR-209ENST00000541102 PTCH2Q9Y6C5 1203 aa17.12■□□□□ 0.33
LTBR-209ENST00000541102 ATAD5Q96QE3 1844 aa17.12■□□□□ 0.33
LTBR-209ENST00000541102 GLRX3O76003 335 aaKnown RBP17.11■□□□□ 0.33
LTBR-209ENST00000541102 BCRP11274 1271 aa17.11■□□□□ 0.33
LTBR-209ENST00000541102 CTGFP29279 349 aa17.11■□□□□ 0.33
LTBR-209ENST00000541102 TRIM47Q96LD4 638 aa17.11■□□□□ 0.33
LTBR-209ENST00000541102 TMOD4Q9NZQ9 345 aa17.11■□□□□ 0.33
LTBR-209ENST00000541102 PTPRFP10586 1907 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 USP17L10C9JJH3 530 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 OSBPP22059 807 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 SHMT1P34896 483 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 PABPC4Q13310 644 aaKnown RBP eCLIP17.1■□□□□ 0.33
LTBR-209ENST00000541102 RAB3GAP1Q15042 981 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 ABCB5Q2M3G0 1257 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 SH3D19Q5HYK7 790 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 KBTBD3Q8NAB2 608 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 PUS7LQ9H0K6 701 aaKnown RBP17.1■□□□□ 0.33
LTBR-209ENST00000541102 OSBPL3Q9H4L5 887 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 CABP5Q9NP86 173 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 PNMA3Q9UL41 463 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 SLC4A4Q9Y6R1 1079 aa17.1■□□□□ 0.33
LTBR-209ENST00000541102 C19orf81C9J6K1 198 aa17.09■□□□□ 0.33
LTBR-209ENST00000541102 ERC2O15083 957 aa17.09■□□□□ 0.33
LTBR-209ENST00000541102 RNF113AO15541 343 aaKnown RBP17.09■□□□□ 0.33
LTBR-209ENST00000541102 GNRH1P01148 92 aa17.09■□□□□ 0.33
LTBR-209ENST00000541102 HOXD10P28358 340 aa17.09■□□□□ 0.33
LTBR-209ENST00000541102 DYNLL2Q96FJ2 89 aa17.09■□□□□ 0.33
LTBR-209ENST00000541102 ATP8A2Q9NTI2 1148 aa17.09■□□□□ 0.33
LTBR-209ENST00000541102 ZSWIM8A7E2V4 1837 aa17.09■□□□□ 0.33
LTBR-209ENST00000541102 CYP2D7A0A087X1C5 515 aa17.08■□□□□ 0.32
LTBR-209ENST00000541102 MPHOSPH10O00566 681 aaKnown RBP17.08■□□□□ 0.32
LTBR-209ENST00000541102 MYCP01106 439 aaPredicted RBP17.08■□□□□ 0.32
LTBR-209ENST00000541102 GSPT1P15170 499 aaKnown RBP17.08■□□□□ 0.32
LTBR-209ENST00000541102 FCGRTP55899 365 aa17.08■□□□□ 0.32
LTBR-209ENST00000541102 GABPAQ06546 454 aa17.08■□□□□ 0.32
LTBR-209ENST00000541102 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.32
LTBR-209ENST00000541102 ANKRD13CQ8N6S4 541 aa17.08■□□□□ 0.32
LTBR-209ENST00000541102 SLC44A5Q8NCS7 719 aa17.08■□□□□ 0.32
LTBR-209ENST00000541102 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.32
LTBR-209ENST00000541102 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.32
LTBR-209ENST00000541102 SRRDQ9UH36 339 aa17.08■□□□□ 0.32
LTBR-209ENST00000541102 USP17L12C9JPN9 530 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 USP17L21D6R901 530 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 PRMT2P55345 433 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 IRX3P78415 501 aaPredicted RBP17.07■□□□□ 0.32
LTBR-209ENST00000541102 ZYXQ15942 572 aaKnown RBP17.07■□□□□ 0.32
LTBR-209ENST00000541102 USP17L2Q6R6M4 530 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 NBPF11Q86T75 865 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 AMOTL1Q8IY63 956 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 SH3TC2Q8TF17 1288 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 ARMC5Q96C12 935 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 P2RX7Q99572 595 aaKnown RBP17.07■□□□□ 0.32
LTBR-209ENST00000541102 FEZ1Q99689 392 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 NAV1Q8NEY1 1877 aa17.07■□□□□ 0.32
LTBR-209ENST00000541102 MYPNQ86TC9 1320 aa17.06■□□□□ 0.32
LTBR-209ENST00000541102 SMIM22K7EJ46 135 aa17.06■□□□□ 0.32
LTBR-209ENST00000541102 SEPT2Q15019 361 aa17.06■□□□□ 0.32
LTBR-209ENST00000541102 C12orf60Q5U649 245 aa17.06■□□□□ 0.32
LTBR-209ENST00000541102 RAET1EQ8TD07 263 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms