RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 SMARCA5O60264 1052 aaPredicted RBP10.92□□□□□ -0.66
LMO3-222ENST00000540445 GDF11O95390 407 aa10.92□□□□□ -0.66
LMO3-222ENST00000540445 POLR3DP05423 398 aaPredicted RBP10.92□□□□□ -0.66
LMO3-222ENST00000540445 HMGCS2P54868 508 aa10.92□□□□□ -0.66
LMO3-222ENST00000540445 FCGRTP55899 365 aa10.92□□□□□ -0.66
LMO3-222ENST00000540445 PABPC4Q13310 644 aaKnown RBP eCLIP10.92□□□□□ -0.66
LMO3-222ENST00000540445 TTC6Q86TZ1 520 aa10.92□□□□□ -0.66
LMO3-222ENST00000540445 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
LMO3-222ENST00000540445 RAET1EQ8TD07 263 aa10.92□□□□□ -0.66
LMO3-222ENST00000540445 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.92□□□□□ -0.66
LMO3-222ENST00000540445 DNAJC18Q9H819 358 aa10.92□□□□□ -0.66
LMO3-222ENST00000540445 PNMA3Q9UL41 463 aa10.92□□□□□ -0.66
LMO3-222ENST00000540445 ZNF532Q9HCE3 1301 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 PDE6AP16499 860 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 ATP5JP18859 108 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 JAG1P78504 1218 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 SH3D19Q5HYK7 790 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 TREML2Q5T2D2 321 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 ANKRD13CQ8N6S4 541 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 EDC3Q96F86 508 aaKnown RBP10.91□□□□□ -0.66
LMO3-222ENST00000540445 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
LMO3-222ENST00000540445 CRNKL1Q9BZJ0 848 aaKnown RBP10.91□□□□□ -0.66
LMO3-222ENST00000540445 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.91□□□□□ -0.66
LMO3-222ENST00000540445 PAG1Q9NWQ8 432 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 TMOD4Q9NZQ9 345 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 BIN2Q9UBW5 565 aaPredicted RBP10.91□□□□□ -0.66
LMO3-222ENST00000540445 SERPINB13Q9UIV8 391 aa10.91□□□□□ -0.66
LMO3-222ENST00000540445 MYPNQ86TC9 1320 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 C19orf81C9J6K1 198 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 USP17L10C9JJH3 530 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 BACE1P56817 501 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 MTMR2Q13614 643 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 MTFR1Q15390 333 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.66
LMO3-222ENST00000540445 RIOK1Q9BRS2 568 aaKnown RBP10.9□□□□□ -0.66
LMO3-222ENST00000540445 WDR18Q9BV38 432 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 GINM1Q9NU53 330 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 MCM9Q9NXL9 1143 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 GABRQQ9UN88 632 aa10.9□□□□□ -0.66
LMO3-222ENST00000540445 ALPK3Q96L96 1907 aa10.9□□□□□ -0.67
LMO3-222ENST00000540445 TNPO2O14787 897 aaKnown RBP10.89□□□□□ -0.67
LMO3-222ENST00000540445 GH2P01242 217 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 GRK4P32298 578 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 PLCD1P51178 756 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 PRKCZQ05513 592 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 RAB3GAP1Q15042 981 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 SHROOM1Q2M3G4 852 aaPredicted RBP10.89□□□□□ -0.67
LMO3-222ENST00000540445 SDR42E1Q8WUS8 393 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 SHISA4Q96DD7 197 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 HAUS7Q99871 368 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 DCTPP1Q9H773 170 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 CABP5Q9NP86 173 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 TAOK2Q9UL54 1235 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 ZBTB21Q9ULJ3 1066 aa10.89□□□□□ -0.67
LMO3-222ENST00000540445 TCRBV5S4A2TA0A5A2 114 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 ADD2P35612 726 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 GCLCP48506 637 aaPredicted RBP10.88□□□□□ -0.67
LMO3-222ENST00000540445 IRX3P78415 501 aaPredicted RBP10.88□□□□□ -0.67
LMO3-222ENST00000540445 FAM110CQ1W6H9 321 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 ABCB5Q2M3G0 1257 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 SLFNL1Q499Z3 407 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 ZSCAN25Q6NSZ9 544 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 TATDN1Q6P1N9 297 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 COA7Q96BR5 231 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 GPATCH3Q96I76 525 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 FEZ1Q99689 392 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 ASCC2Q9H1I8 757 aaPredicted RBP10.88□□□□□ -0.67
LMO3-222ENST00000540445 EHD4Q9H223 541 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 ARMT1Q9H993 441 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 ECHDC1Q9NTX5 307 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 RLFQ13129 1914 aa10.88□□□□□ -0.67
LMO3-222ENST00000540445 PARP14Q460N5 1801 aa10.87□□□□□ -0.67
LMO3-222ENST00000540445 MPHOSPH10O00566 681 aaKnown RBP10.87□□□□□ -0.67
LMO3-222ENST00000540445 FLT3LGP49771 235 aa10.87□□□□□ -0.67
LMO3-222ENST00000540445 UBXN2AP68543 259 aa10.87□□□□□ -0.67
LMO3-222ENST00000540445 IRF5Q13568 498 aa10.87□□□□□ -0.67
LMO3-222ENST00000540445 ZYXQ15942 572 aaKnown RBP10.87□□□□□ -0.67
LMO3-222ENST00000540445 USP17L2Q6R6M4 530 aa10.87□□□□□ -0.67
LMO3-222ENST00000540445 CCAR1Q8IX12 1150 aaKnown RBP10.87□□□□□ -0.67
LMO3-222ENST00000540445 LCORLQ8N3X6 602 aa10.87□□□□□ -0.67
LMO3-222ENST00000540445 SLAIN1Q8ND83 568 aa10.87□□□□□ -0.67
LMO3-222ENST00000540445 DDRGK1Q96HY6 314 aa10.87□□□□□ -0.67
LMO3-222ENST00000540445 P2RX7Q99572 595 aaKnown RBP10.87□□□□□ -0.67
LMO3-222ENST00000540445 DCP1AQ9NPI6 582 aaPredicted RBP10.87□□□□□ -0.67
LMO3-222ENST00000540445 ZBTB47Q9UFB7 747 aaPredicted RBP10.87□□□□□ -0.67
LMO3-222ENST00000540445 CEP290O15078 2479 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 ADCY3O60266 1144 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 MBD4O95243 580 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 GJB1P08034 283 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 CCL5P13501 91 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 HOXA7P31268 230 aaPredicted RBP10.86□□□□□ -0.67
LMO3-222ENST00000540445 GJA8P48165 433 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 UBE2Q1Q7Z7E8 422 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 AMOTL1Q8IY63 956 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 PXYLP1Q8TE99 480 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 RNF208Q9H0X6 261 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 EMILIN3Q9NT22 766 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 MORF4L1Q9UBU8 362 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 PCDHB15Q9Y5E8 787 aa10.86□□□□□ -0.67
LMO3-222ENST00000540445 FRMPD3Q5JV73 1810 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms