RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 SLX4Q8IY92 1834 aa11.37□□□□□ -0.59
MDH1-215ENST00000539945 CHD4Q14839 1912 aa11.37□□□□□ -0.59
MDH1-215ENST00000539945 NEDD4P46934 1319 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 BAG3O95817 575 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 PCP11498 1178 aaKnown RBP11.36□□□□□ -0.59
MDH1-215ENST00000539945 PDCP20941 246 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 SYT1P21579 422 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 PDIA3P30101 505 aaKnown RBP11.36□□□□□ -0.59
MDH1-215ENST00000539945 STK3Q13188 491 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 MFSD14BQ5SR56 506 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 CYB5R4Q7L1T6 521 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 MTA3Q9BTC8 594 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 RBM27Q9P2N5 1060 aaKnown RBP11.36□□□□□ -0.59
MDH1-215ENST00000539945 TACC3Q9Y6A5 838 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 MROH7-TTC4A0A0A0MT08 1334 aa11.36□□□□□ -0.59
MDH1-215ENST00000539945 B4E1Z4 1266 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 STX6O43752 255 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 FGRP09769 529 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 SCRN1Q12765 414 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 DIXDC1Q155Q3 683 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 SBK1Q52WX2 424 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 CTR9Q6PD62 1173 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 IGDCC4Q8TDY8 1250 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 DCP1AQ9NPI6 582 aaPredicted RBP11.35□□□□□ -0.59
MDH1-215ENST00000539945 ANGEL1Q9UNK9 670 aaKnown RBP11.35□□□□□ -0.59
MDH1-215ENST00000539945 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 GPR75-ASB3A0A0A6YYF3 556 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 MINDY4BA8MYZ0 360 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 GOLGA6L22H0YM25 854 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 SH2B2O14492 632 aaPredicted RBP11.35□□□□□ -0.59
MDH1-215ENST00000539945 KDM4AO75164 1064 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 ZSCAN22P10073 491 aaPredicted RBP11.35□□□□□ -0.59
MDH1-215ENST00000539945 APLP1P51693 650 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 GTF2IP78347 998 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 PODNQ7Z5L7 613 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 SMARCC2Q8TAQ2 1214 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 NOL10Q9BSC4 688 aaKnown RBP11.35□□□□□ -0.59
MDH1-215ENST00000539945 PRR14Q9BWN1 585 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 INCENPQ9NQS7 918 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 ZSWIM5Q9P217 1185 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 MKRN1Q9UHC7 482 aaKnown RBP11.35□□□□□ -0.59
MDH1-215ENST00000539945 BRPF3Q9ULD4 1205 aa11.35□□□□□ -0.59
MDH1-215ENST00000539945 SNED1Q8TER0 1413 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 MYH2Q9UKX2 1941 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 GAKO14976 1311 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 KLF18A0A0U1RQI7 1052 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 USP17L12C9JPN9 530 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 USP17L21D6R901 530 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 DHX16O60231 1041 aaKnown RBP11.34□□□□□ -0.59
MDH1-215ENST00000539945 LIFRP42702 1097 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 LARP1BQ659C4 914 aaKnown RBP11.34□□□□□ -0.59
MDH1-215ENST00000539945 SGMS1Q86VZ5 419 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 SUPT20HQ8NEM7 779 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 ESR2Q92731 530 aa11.34□□□□□ -0.59
MDH1-215ENST00000539945 ARPP21Q9UBL0 812 aaPredicted RBP11.34□□□□□ -0.59
MDH1-215ENST00000539945 KIF13BQ9NQT8 1826 aa11.33□□□□□ -0.6
MDH1-215ENST00000539945 BAZ2AQ9UIF9 1905 aaKnown RBP11.33□□□□□ -0.6
MDH1-215ENST00000539945 CTDNEP1O95476 244 aa11.33□□□□□ -0.6
MDH1-215ENST00000539945 SLC3A2P08195 630 aaKnown RBP11.33□□□□□ -0.6
MDH1-215ENST00000539945 NT5C2P49902 561 aa11.33□□□□□ -0.6
MDH1-215ENST00000539945 HMGN5P82970 282 aaKnown RBP11.33□□□□□ -0.6
MDH1-215ENST00000539945 SKOR2Q2VWA4 1001 aaPredicted RBP11.33□□□□□ -0.6
MDH1-215ENST00000539945 TMEM67Q5HYA8 995 aa11.33□□□□□ -0.6
MDH1-215ENST00000539945 TTLL6Q8N841 843 aa11.33□□□□□ -0.6
MDH1-215ENST00000539945 NSUN7Q8NE18 718 aaKnown RBP11.33□□□□□ -0.6
MDH1-215ENST00000539945 SH3RF3Q8TEJ3 882 aaPredicted RBP11.33□□□□□ -0.6
MDH1-215ENST00000539945 LY9Q9HBG7 655 aa11.33□□□□□ -0.6
MDH1-215ENST00000539945 MTMR6Q9Y217 621 aa11.33□□□□□ -0.6
MDH1-215ENST00000539945 KIF3AQ9Y496 699 aa11.33□□□□□ -0.6
MDH1-215ENST00000539945 CYP2D7A0A087X1C5 515 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 GOLGA8BA8MQT2 603 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 IFIT3O14879 490 aaKnown RBP11.32□□□□□ -0.6
MDH1-215ENST00000539945 ORC4O43929 436 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 TRAK2O60296 914 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 JAK2O60674 1132 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 F13A1P00488 732 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 KCNA3P22001 575 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 BTDP43251 543 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 USP5P45974 858 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 FKBP1AP62942 108 aaKnown RBP11.32□□□□□ -0.6
MDH1-215ENST00000539945 CCT2P78371 535 aaKnown RBP11.32□□□□□ -0.6
MDH1-215ENST00000539945 SART3Q15020 963 aaKnown RBP11.32□□□□□ -0.6
MDH1-215ENST00000539945 PKDCCQ504Y2 493 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
MDH1-215ENST00000539945 NUDT18Q6ZVK8 323 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 TMTC2Q8N394 836 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 CERS5Q8N5B7 392 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 FOXD4L4Q8WXT5 416 aaPredicted RBP11.32□□□□□ -0.6
MDH1-215ENST00000539945 MTFR1LQ9H019 292 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 NCOA5Q9HCD5 579 aaKnown RBP11.32□□□□□ -0.6
MDH1-215ENST00000539945 TOMM22Q9NS69 142 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 FAM198AQ9UFP1 575 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 NAP1L2Q9ULW6 460 aaPredicted RBP11.32□□□□□ -0.6
MDH1-215ENST00000539945 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.32□□□□□ -0.6
MDH1-215ENST00000539945 ATP6V1DQ9Y5K8 247 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 LAMB1P07942 1786 aa11.32□□□□□ -0.6
MDH1-215ENST00000539945 PTPDC1A2A3K4 754 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms