RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 HSP90B1P14625 803 aaKnown RBP8.94□□□□□ -0.98
CCDC60-204ENST00000539847 HUNKP57058 714 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 KRT85P78386 507 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 GRM1Q13255 1194 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 ANKRD1Q15327 319 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 SF3B3Q15393 1217 aaKnown RBP8.94□□□□□ -0.98
CCDC60-204ENST00000539847 RUFY3Q7L099 469 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 TRPM4Q8TD43 1214 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 KIF1BPQ96EK5 621 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 VRTNQ9H8Y1 702 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 TSPYL4Q9UJ04 414 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 PYCARDQ9ULZ3 195 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 ZNF609O15014 1411 aa8.94□□□□□ -0.98
CCDC60-204ENST00000539847 YDJCA8MPS7 323 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 BHMG1C9JSJ3 638 aaPredicted RBP8.93□□□□□ -0.98
CCDC60-204ENST00000539847 IGSF3O75054 1194 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 RAD17O75943 681 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 GLRX3O76003 335 aaKnown RBP8.93□□□□□ -0.98
CCDC60-204ENST00000539847 ATG7O95352 703 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 PSMA5P28066 241 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 PBX2P40425 430 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 ZNF75DP51815 510 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 AK2P54819 239 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 EMP3P54852 163 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 FKBP1BP68106 108 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 TYRO3Q06418 890 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 SLC20A2Q08357 652 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 NCBP1Q09161 790 aaKnown RBP8.93□□□□□ -0.98
CCDC60-204ENST00000539847 DGKZQ13574 1117 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 TSGA10IPQ3SY00 556 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 ATL3Q6DD88 541 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 RGMBQ6NW40 437 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 KRT26Q7Z3Y9 468 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 LAPTM4BQ86VI4 370 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 TICAM2Q86XR7 235 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 C2orf69Q8N8R5 385 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 CCDC112Q8NEF3 446 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 HELBQ8NG08 1087 aaPredicted RBP8.93□□□□□ -0.98
CCDC60-204ENST00000539847 RILPL2Q969X0 211 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 MRFAP1L1Q96HT8 127 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 CHAMP1Q96JM3 812 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 NUP62CLQ9H1M0 184 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 GBA2Q9HCG7 927 aaPredicted RBP8.93□□□□□ -0.98
CCDC60-204ENST00000539847 TRMT112Q9UI30 125 aaKnown RBP8.93□□□□□ -0.98
CCDC60-204ENST00000539847 CYP46A1Q9Y6A2 500 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 ANKRD36CQ5JPF3 1778 aa8.93□□□□□ -0.98
CCDC60-204ENST00000539847 FAM205CA6NFA0 338 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 FAM155AB1AL88 458 aaPredicted RBP8.92□□□□□ -0.98
CCDC60-204ENST00000539847 AP5Z1O43299 807 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 SLFN14P0C7P3 912 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 SOX11P35716 441 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 KCNJ6P48051 423 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 TRIM28Q13263 835 aaKnown RBP8.92□□□□□ -0.98
CCDC60-204ENST00000539847 KRT24Q2M2I5 525 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 PUS10Q3MIT2 529 aaKnown RBP8.92□□□□□ -0.98
CCDC60-204ENST00000539847 GIMAP6Q6P9H5 292 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 COPS6Q7L5N1 327 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 ZNF687Q8N1G0 1237 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 ZNF397Q8NF99 534 aaPredicted RBP8.92□□□□□ -0.98
CCDC60-204ENST00000539847 PI4K2BQ8TCG2 481 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 DCPSQ96C86 337 aaKnown RBP8.92□□□□□ -0.98
CCDC60-204ENST00000539847 CHMP4CQ96CF2 233 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 ZFRQ96KR1 1074 aaKnown RBP8.92□□□□□ -0.98
CCDC60-204ENST00000539847 UCN2Q96RP3 112 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 EYA3Q99504 573 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 UPF3BQ9BZI7 483 aaKnown RBP8.92□□□□□ -0.98
CCDC60-204ENST00000539847 CLSTN2Q9H4D0 955 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 PDRG1Q9NUG6 133 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 TFIP11Q9UBB9 837 aaKnown RBP8.92□□□□□ -0.98
CCDC60-204ENST00000539847 ZHX1Q9UKY1 873 aaPredicted RBP8.92□□□□□ -0.98
CCDC60-204ENST00000539847 EXOC6BQ9Y2D4 811 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 MRVI1Q9Y6F6 885 aa8.92□□□□□ -0.98
CCDC60-204ENST00000539847 LRRC37AA6NMS7 1700 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 DUOX1Q9NRD9 1551 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 PSMD14O00487 310 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 ATP8B1O43520 1251 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 VIL1P09327 827 aaKnown RBP8.91□□□□□ -0.98
CCDC60-204ENST00000539847 TNNT1P13805 278 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 EIF2S2P20042 333 aaKnown RBP8.91□□□□□ -0.98
CCDC60-204ENST00000539847 GJB2P29033 226 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 MTX1Q13505 466 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 PROSER3Q2NL68 480 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 NOM1Q5C9Z4 860 aaKnown RBP8.91□□□□□ -0.98
CCDC60-204ENST00000539847 ZSCAN25Q6NSZ9 544 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 CCDC186Q7Z3E2 898 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 KRT222Q8N1A0 295 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 PLBD2Q8NHP8 589 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 KIF18AQ8NI77 898 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 PRR7Q8TB68 274 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 RHPN1Q8TCX5 695 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 XAGE3Q8WTP9 111 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 ERO1AQ96HE7 468 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 USP44Q9H0E7 712 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 TSPYL1Q9H0U9 437 aa8.91□□□□□ -0.98
CCDC60-204ENST00000539847 DLG5Q8TDM6 1919 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 PNMA6EA0A0J9YXQ4 647 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 POTEB3A0JP26 581 aa8.9□□□□□ -0.98
CCDC60-204ENST00000539847 UBTFL1P0CB47 393 aaPredicted RBP8.9□□□□□ -0.98
CCDC60-204ENST00000539847 ZKSCAN1P17029 563 aaPredicted RBP8.9□□□□□ -0.98
CCDC60-204ENST00000539847 MMP14P50281 582 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms