RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 DLEC1Q9Y238 1755 aa11.77□□□□□ -0.52
SPARC-209ENST00000539687 TSPY2A6NKD2 308 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 KINO60870 393 aaKnown RBP11.77□□□□□ -0.53
SPARC-209ENST00000539687 PPP6R2O75170 966 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 U2AF2P26368 475 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPARC-209ENST00000539687 CDC27P30260 824 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 FKBP1AP62942 108 aaKnown RBP11.77□□□□□ -0.53
SPARC-209ENST00000539687 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 C12orf60Q5U649 245 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 ANO1Q5XXA6 986 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 FAM173BQ6P4H8 233 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 SASS6Q6UVJ0 657 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 CRACR2BQ8N4Y2 399 aaPredicted RBP11.77□□□□□ -0.53
SPARC-209ENST00000539687 ENAHQ8N8S7 591 aaPredicted RBP11.77□□□□□ -0.53
SPARC-209ENST00000539687 NUP133Q8WUM0 1156 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
SPARC-209ENST00000539687 ANKS1AQ92625 1134 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 PANK2Q9BZ23 570 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 FAM217BQ9NTX9 383 aaPredicted RBP11.77□□□□□ -0.53
SPARC-209ENST00000539687 TCP11L1Q9NUJ3 509 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 DACT1Q9NYF0 836 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 MORC2Q9Y6X9 1032 aaPredicted RBP11.77□□□□□ -0.53
SPARC-209ENST00000539687 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.53
SPARC-209ENST00000539687 WTIPA6NIX2 430 aaPredicted RBP11.76□□□□□ -0.53
SPARC-209ENST00000539687 G3V3G9 751 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 SPTLC2O15270 562 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 PRPF3O43395 683 aaKnown RBP11.76□□□□□ -0.53
SPARC-209ENST00000539687 BMP15O95972 392 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 POLR3DP05423 398 aaPredicted RBP11.76□□□□□ -0.53
SPARC-209ENST00000539687 MMP10P09238 476 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 FOSBP53539 338 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 GUCY1B3Q02153 619 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 RILPL1Q5EBL4 403 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 PPP4R3BQ5MIZ7 849 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 MFSD14BQ5SR56 506 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 DPP8Q6V1X1 898 aaPredicted RBP11.76□□□□□ -0.53
SPARC-209ENST00000539687 ZNF444Q8N0Y2 327 aaPredicted RBP11.76□□□□□ -0.53
SPARC-209ENST00000539687 LINC00301Q8NCQ3 95 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 CNKSR1Q969H4 720 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 RTFDC1Q9BY42 306 aaPredicted RBP11.76□□□□□ -0.53
SPARC-209ENST00000539687 MKNK2Q9HBH9 465 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
SPARC-209ENST00000539687 NAV1Q8NEY1 1877 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 H0YIN7 160 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 MMP1P03956 469 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 BTDP43251 543 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
SPARC-209ENST00000539687 SUPT20HQ8NEM7 779 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 PHKBQ93100 1093 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 CCDC34Q96HJ3 373 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 PGBD1Q96JS3 809 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 PDLIM2Q96JY6 352 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 LZTS2Q9BRK4 669 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 ZKSCAN3Q9BRR0 538 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 KAT14Q9H8E8 782 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 SPON1Q9HCB6 807 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 POLLQ9UGP5 575 aa11.75□□□□□ -0.53
SPARC-209ENST00000539687 MKRN1Q9UHC7 482 aaKnown RBP11.75□□□□□ -0.53
SPARC-209ENST00000539687 ANKRD31Q8N7Z5 1873 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 LIG1P18858 919 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 RXRAP19793 462 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 SLC39A14Q15043 492 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 NBPF11Q86T75 865 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 RAB11FIP4Q86YS3 637 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 NOSTRINQ8IVI9 506 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 CCDC144CPQ8IYA2 1237 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 TEX11Q8IYF3 940 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 FSIP1Q8NA03 581 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 FAM200AQ8TCP9 573 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 SH3RF3Q8TEJ3 882 aaPredicted RBP11.74□□□□□ -0.53
SPARC-209ENST00000539687 TIGD1Q96MW7 591 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 MYL10Q9BUA6 226 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
SPARC-209ENST00000539687 MRIQ9BWK5 157 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 SENP2Q9HC62 589 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 INCENPQ9NQS7 918 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
SPARC-209ENST00000539687 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
SPARC-209ENST00000539687 TACC3Q9Y6A5 838 aa11.74□□□□□ -0.53
SPARC-209ENST00000539687 TSPY3P0CV98 308 aa11.73□□□□□ -0.53
SPARC-209ENST00000539687 TSPY8P0CW00 308 aa11.73□□□□□ -0.53
SPARC-209ENST00000539687 CMA1P23946 247 aa11.73□□□□□ -0.53
SPARC-209ENST00000539687 CEBPZQ03701 1054 aaKnown RBP11.73□□□□□ -0.53
SPARC-209ENST00000539687 TROAPQ12815 778 aa11.73□□□□□ -0.53
SPARC-209ENST00000539687 ZRSR1Q15695 479 aaKnown RBP11.73□□□□□ -0.53
SPARC-209ENST00000539687 TMTC3Q6ZXV5 915 aa11.73□□□□□ -0.53
SPARC-209ENST00000539687 C2CD5Q86YS7 1000 aa11.73□□□□□ -0.53
SPARC-209ENST00000539687 MYO3BQ8WXR4 1341 aa11.73□□□□□ -0.53
SPARC-209ENST00000539687 NAT10Q9H0A0 1025 aaKnown RBP11.73□□□□□ -0.53
SPARC-209ENST00000539687 HOOK1Q9UJC3 728 aaKnown RBP11.73□□□□□ -0.53
SPARC-209ENST00000539687 C10orf71Q711Q0 1435 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 CUTAO60888 179 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 DTNBO60941 627 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 NR1I2O75469 434 aa11.72□□□□□ -0.53
SPARC-209ENST00000539687 TPM3P06753 285 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms